Data search
Results for MligTC455_21785
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21785 | 107 | 2.24 | Mlig455_005064 | Neo: - |
KRIT1 | Mlig455_005064 {REF} {Length: 4037} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=53.0]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeats (many copies) [PF13637.8, score=40.3]; Ankyrin repeat [PF00023.32, score=35.8]; Ankyrin repeat [PF13606.8, score=32.7]; FERM central domain [PF00373.20, score=26.3]} {Human: ENSG00000001631, KRIT1, KRIT1, ankyrin repeat containing, [RH, Score=218, Expect=2e-60]; ENSG00000285953, AC000120.3, novel protein, [RH, Score=209, Expect=2e-57]} {Mouse: ENSMUSG00000000600, Krit1, KRIT1, ankyrin repeat containing, [RH, Score=207, Expect=1e-56]} {Dmel: FBgn0029137, Patsas, [Score=51.6, Expect=2e-06]} {Celegans: WBGene00013955, kri-1, KRIT 1 (Krev interaction trapped/cerebral cavernous malformation 1) homolog; Krev interaction trapped/cerebral cavernous malformation 1 isoform a, [RH, Score=85.9, Expect=5e-17]} {Smed: dd_Smed_v6_10935_0_1, dd_Smed_v6_10935_0_1, [RH, Score=137, Expect=3e-33]} {RNA1509_17918} {RNA1310_6799, RNA1509_17918} {RNA1509_17918, RNA815_1724} |
Cumulative graph for MligTC455_21785
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.584 | 2.097 | 0.23301 | 0.87523 | |
| RegionR2 | 1.701 | 2.097 | 0.15377 | 0.49044 | |
| RegionR3 | 0.429 | 2.097 | 0.66548 | 1.00000 | |
| RegionR4 | 0.505 | 2.097 | 0.65989 | 0.95995 | |
| RegionR5 | -0.203 | 2.097 | 0.91342 | 1.00000 | |
| RegionR6 | 0.06 | 2.097 | 0.84131 | 1.00000 | |
| RegionR7 | 1.746 | 2.097 | 0.10250 | 0.61034 | |
| RegionR8 | 1.346 | 2.097 | 0.31704 | 0.94976 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.346 | 2.097 | 0.99980 | 1.00000 | |
| RegenerationR2 | 0.189 | 2.097 | 0.79286 | 0.98748 | |
| RegenerationR3 | -0.709 | 2.097 | 0.47226 | 0.84557 | |
| RegenerationR4 | -0.631 | 2.097 | 0.54665 | 0.89099 | |
| RegenerationR5 | 0.609 | 2.097 | 0.45296 | 0.83247 | |
| RegenerationR6 | -0.341 | 2.097 | 0.75424 | 0.95426 | |
| RegenerationBL | -4.042 | 2.097 | 0.11435 | 0.39970 | |
| RegenerationTP | -2.219 | 2.097 | 0.13079 | 0.54417 |
Genes with expression patterns similar to MligTC455_21785
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21785 | 107 | 2.24 | Mlig455_005064 | Neo: - |
KRIT1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005064 {REF} {Length: 4037} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=53.0]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeats (many copies) [PF13637.8, score=40.3]; Ankyrin repeat [PF00023.32, score=35.8]; Ankyrin repeat [PF13606.8, score=32.7]; FERM central domain [PF00373.20, score=26.3]} {Human: ENSG00000001631, KRIT1, KRIT1, ankyrin repeat containing, [RH, Score=218, Expect=2e-60]; ENSG00000285953, AC000120.3, novel protein, [RH, Score=209, Expect=2e-57]} {Mouse: ENSMUSG00000000600, Krit1, KRIT1, ankyrin repeat containing, [RH, Score=207, Expect=1e-56]} {Dmel: FBgn0029137, Patsas, [Score=51.6, Expect=2e-06]} {Celegans: WBGene00013955, kri-1, KRIT 1 (Krev interaction trapped/cerebral cavernous malformation 1) homolog; Krev interaction trapped/cerebral cavernous malformation 1 isoform a, [RH, Score=85.9, Expect=5e-17]} {Smed: dd_Smed_v6_10935_0_1, dd_Smed_v6_10935_0_1, [RH, Score=137, Expect=3e-33]} {RNA1509_17918} {RNA1310_6799, RNA1509_17918} {RNA1509_17918, RNA815_1724} |
| 2. | MligTC455_14105 | 81 | 1.7 | Mlig455_012934 | Neo: - Age: - |
TMBIM4 | 1.736 | - | - | 0.770 | - | - | 0.966 | Mlig455_012934 {REF} {Length: 2323} {TRANSSPLICED} {Pfam: Inhibitor of apoptosis-promoting Bax1 [PF01027.22, score=123.9]} {Human: ENSG00000155957, TMBIM4, transmembrane BAX inhibitor motif containing 4, [Score=138, Expect=3e-40]} {Mouse: ENSMUSG00000020225, Tmbim4, transmembrane BAX inhibitor motif containing 4, [Score=144, Expect=1e-42]} {Dmel: FBgn0013305, Nmda1, N-methyl-D-aspartate receptor-associated protein, [Score=92.8, Expect=2e-22]} {Celegans: WBGene00006479, tmbi-4, Transmembrane BAX inhibitor motif-containing protein 4, [Score=111, Expect=5e-30]} {Smed: dd_Smed_v6_1521_0_1, dd_Smed_v6_1521_0_1, [Score=171, Expect=9e-54]} {RNA1509_25696, RNA1509_49717} {RNA1310_47965.2, RNA1509_49717} {RNA1509_49717, RNA815_15216} |
| 3. | MligTC455_49195 | 123 | 2.56 | Mlig455_063688 | Neo: - Age: - |
OTUD3 | 1.716 | - | 0.755 | - | 0.961 | - | - | Mlig455_063688 {REF} {Length: 2508} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=44.5]; Peptidase C65 Otubain [PF10275.11, score=30.1]} {Human: ENSG00000169914, OTUD3, OTU deubiquitinase 3, [RH, Score=211, Expect=3e-64]} {Mouse: ENSMUSG00000041161, Otud3, OTU domain containing 3, [RH, Score=207, Expect=9e-63]} {Smed: dd_Smed_v6_7154_0_1, dd_Smed_v6_7154_0_1, [RH, Score=181, Expect=5e-55]} {RNA1509_10142, RNA1509_18442} {RNA1310_8277, RNA1509_10142, RNA1509_18442} {RNA1509_10142, RNA1509_18442, RNA815_6103} |
| 4. | MligTC455_18485 | 31 | 0.64 | Mlig455_025676 | Neo: - Age: logFC(26M/2M)=-0.535 |
BEST3 | 0.988 | - | - | 0.988 | - | - | - | Mlig455_025676 {REF} {Length: 2042} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=192.0]} {Human: ENSG00000127325, BEST3, bestrophin 3, [Score=130, Expect=4e-31]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=128, Expect=7e-31]; ENSMUSG00000020169, Best3, bestrophin 3, [Score=127, Expect=2e-30]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=122, Expect=6e-29]} {Celegans: WBGene00009340, best-14, Bestrophin homolog 14, [Score=110, Expect=7e-26]} {Smed: dd_Smed_v6_3859_0_1, dd_Smed_v6_3859_0_1, [Score=236, Expect=9e-71]} {RNA1509_5589} {RNA1310_3796.1} {RNA815_2846.1} |
| 5. | MligTC455_53886 | 123 | 2.56 | Mlig455_068271 | Neo: - Age: Down-Up-Down |
STARD10 | 0.985 | - | - | 0.985 | - | - | - | Mlig455_068271 {REF} {Length: 2322} {TRANSSPLICED} {Pfam: START domain [PF01852.21, score=105.5]} {Human: ENSG00000214530, STARD10, StAR related lipid transfer domain containing 10, [Score=206, Expect=6e-65]} {Mouse: ENSMUSG00000030688, Stard10, START domain containing 10, [Score=207, Expect=9e-66]} {Celegans: WBGene00012127, T28D6.7, [RH, Score=216, Expect=4e-69]} {Smed: dd_Smed_v6_498_0_1, dd_Smed_v6_498_0_1, [RH, Score=294, Expect=4e-100]} {RNA1509_25193} {RNA1310_26702.1} {RNA815_13572.1} |
| 6. | MligTC455_26259 | 76 | 1.59 | Mlig455_026466 | Neo: - Age: - |
SSUH2 | 0.984 | - | - | - | - | 0.984 | - | Mlig455_026466 {REF} {Length: 2558} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=211, Expect=9e-64]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=168, Expect=6e-48]} {Celegans: WBGene00013455, ssu-2, Suppressor of Stomatin mutant Uncoordination, [Score=67.8, Expect=3e-12]} {RNA1509_35931} {RNA1310_33249} {RNA815_15534} |
| 7. | MligTC455_08846 | 13 | 0.26 | Mlig455_051270 | Neo: - Age: - |
0.977 | - | - | 0.977 | - | - | - | Mlig455_051270 {REF} {Length: 1527} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_73804} {RNA815_59042} | |
| 8. | MligTC455_14499 | 35 | 0.73 | Mlig455_052131 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_052131 {REF} {Length: 203} {NoTransDecoderORF} {RNA1310_10102} {RNA815_11180} | |
| 9. | MligTC455_32224 | 245 | 5.1 | Mlig455_048779 | Neo: - Age: - |
EFCAB7 | 0.968 | - | - | 0.968 | - | - | - | Mlig455_048779 {REF} {Length: 2643} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=71.0]; EF-hand domain pair [PF13499.8, score=67.2]; EF-hand domain [PF13405.8, score=63.7]; EF hand [PF13202.8, score=63.0]; EF-hand domain pair [PF13833.8, score=45.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=24.0]; EF hand [PF14788.8, score=19.7]} {Human: ENSG00000203965, EFCAB7, EF-hand calcium binding domain 7, [Score=153, Expect=6e-39]} {Mouse: ENSMUSG00000091898, Tnnc1, troponin C, cardiac/slow skeletal, [Score=72.8, Expect=1e-14]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=57.0, Expect=2e-09]} {Celegans: WBGene00006861, cal-5, CALmodulin related genes, [Score=57.8, Expect=1e-09]} {Smed: dd_Smed_v6_12168_0_1, dd_Smed_v6_12168_0_1, [Score=186, Expect=4e-51]} {RNA1509_55933} {RNA1310_1543.2, RNA1509_55933} {RNA1509_55933, RNA815_2194} |
| 10. | MligTC455_05667 | 30 | 0.63 | Mlig455_042902 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_042902 {REF} {Length: 1134} {RNA1509_46896} {RNA1310_11786} | |
| 11. | MligTC455_19688 | 948 | 19.76 | Mlig455_035947, Mlig455_058414 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.370/0.01905 |
0.966 | - | - | - | - | - | 0.966 | Mlig455_035947 {REF} {Length: 1680} {TRANSSPLICED} {Pfam: Phosphoribosyl transferase domain [PF00156.29, score=38.9]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=35.1]; Phosphoribosyl synthetase-associated domain [PF14572.8, score=20.8]} {Smed: dd_Smed_v6_12495_0_1, dd_Smed_v6_12495_0_1, [RH, Score=294, Expect=1e-98]} {RNA1509_40951} {RNA1310_13851.1} {RNA815_7640} Mlig455_058414 {REF} {Length: 2312} {TRANSSPLICED} {Pfam: Phosphoribosyl transferase domain [PF00156.29, score=38.9]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=35.1]; Phosphoribosyl synthetase-associated domain [PF14572.8, score=21.0]} {Smed: dd_Smed_v6_12495_0_1, dd_Smed_v6_12495_0_1, [RH, Score=294, Expect=1e-98]} {RNA1509_38072, RNA1509_40951} {RNA1310_13851.1, RNA1509_38072, RNA1509_40951} {RNA1509_38072, RNA1509_40951, RNA815_7640} |
|
| 12. | MligTC455_43212 | 25 | 0.51 | Mlig455_030578 | Neo: - Age: - |
ZNF16 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_030578 {REF} {Length: 1942} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=55.4]; Zinc finger, C2H2 type [PF00096.28, score=51.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=38.5]; Zinc-finger of C2H2 type [PF12874.9, score=34.0]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=25.9]; Zinc-fingers and homeoboxes C2H2 finger domain [PF18387.3, score=20.8]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=19.4]} {Human: ENSG00000170631, ZNF16, zinc finger protein 16, [Score=84.7, Expect=6e-17]; ENSG00000178175, ZNF366, zinc finger protein 366, [Score=82.0, Expect=4e-16]; ENSG00000213973, ZNF99, zinc finger protein 99, [Score=81.6, Expect=7e-16]; ENSG00000196350, ZNF729, zinc finger protein 729, [Score=80.5, Expect=2e-15]; ENSG00000180787, ZFP3, ZFP3 zinc finger protein, [Score=80.5, Expect=9e-16]} {Mouse: ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=83.2, Expect=7e-17]; ENSMUSG00000050919, Zfp366, zinc finger protein 366, [Score=80.1, Expect=1e-15]} {Dmel: FBgn0038550, CG17801, [Score=68.9, Expect=2e-12]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=52.4, Expect=1e-07]} {Smed: dd_Smed_v6_11840_0_1, dd_Smed_v6_11840_0_1, [Score=57.8, Expect=4e-09]} {RNA1509_14767, RNA1509_19735} {RNA1310_5349, RNA1509_19735} {RNA1509_19735, RNA815_28876} |
| 13. | MligTC455_29073 | 88 | 1.84 | Mlig455_029132, Mlig455_040198 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_029132 {REF} {Length: 2937} {NoTransDecoderORF} {RNA1509_45811} {RNA1310_50362} {RNA815_3257.3} Mlig455_040198 {REF} {Length: 1035} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_4307.1} {RNA815_2326} |
|
| 14. | MligTC455_42514 | 28 | 0.59 | Mlig455_027746 | Neo: - Age: Up-Down-Down |
KCNC2 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_027746 {REF} {Length: 2596} {Pfam: Ion transport protein [PF00520.33, score=123.8]; BTB/POZ domain [PF02214.24, score=86.8]; Ion channel [PF07885.18, score=37.1]} {Human: ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=284, Expect=2e-86]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=279, Expect=3e-85]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [Score=270, Expect=2e-81]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=279, Expect=3e-85]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=270, Expect=2e-81]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=280, Expect=7e-87]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [Score=303, Expect=3e-94]} {Smed: dd_Smed_v6_13250_0_1, dd_Smed_v6_13250_0_1, [Score=286, Expect=3e-88]} {RNA1509_33421} {RNA1310_15684} {RNA815_16308} |
| 15. | MligTC455_34971 | 458 | 9.55 | Mlig455_025024 | Neo: - Age: Up-Down-Up Region-enriched R2: 1.994/0.04087 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_025024 {REF} {Length: 1861} {TRANSSPLICED} {RNA1509_42153} {RNA1310_15720.1, RNA1509_42153} {RNA1509_42153, RNA815_7713} | |
| 16. | MligTC455_44538 | 162 | 3.37 | Mlig455_042460 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.820/0.00714 |
PRDM10 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_042460 {REF} {Length: 3805} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=53.8]; C2H2-type zinc finger [PF13894.8, score=53.2]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=24.5]; Zinc-finger of C2H2 type [PF12874.9, score=21.5]} {Human: ENSG00000170325, PRDM10, PR/SET domain 10, [RH, Score=151, Expect=8e-37]} {Mouse: ENSMUSG00000042496, Prdm10, PR domain containing 10, [RH, Score=150, Expect=2e-36]} {Dmel: FBgn0030314, CG11696, [Score=55.8, Expect=2e-07]} {RNA1509_23473} {RNA1310_4659} {RNA815_26860} |
| 17. | MligTC455_25058 | 7 | 0.15 | Mlig455_029944 | Neo: - Age: Up-Down-Down |
HERC2 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_029944 {REF} {Length: 9352} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=324.8]; HECT-domain (ubiquitin-transferase) [PF00632.27, score=182.7]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=136.1]} {Human: ENSG00000128731, HERC2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=1546, Expect=0.0]; ENSG00000276802, HERC2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=1545, Expect=0.0]} {Mouse: ENSMUSG00000030451, Herc2, HECT and RLD domain containing E3 ubiquitin protein ligase 2, [RH, Score=1470, Expect=0.0]} {Dmel: FBgn0031107, HERC2, HECT and RLD domain containing protein 2, [RH, Score=1266, Expect=0.0]} {Celegans: WBGene00022358, Y92H12A.2, E3 ubiquitin-protein ligase, [Score=116, Expect=8e-27]} {Smed: dd_Smed_v6_3885_0_1, dd_Smed_v6_3885_0_1, [RH, Score=1101, Expect=0.0]} {RNA1509_2217, RNA1509_56877} {RNA1310_95.1, RNA1509_56877} {RNA1509_56877, RNA815_620} |
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