Data search
Results for MligTC455_19707
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19707 | 146 | 3.03 | Mlig455_060076 | Neo: Int S/G2/M Age: Up-Down-Down |
DNA2 | Mlig455_060076 {REF} {Length: 2519} {Pfam: AAA domain [PF13087.8, score=144.7]; AAA domain [PF13086.8, score=68.9]} {Human: ENSG00000138346, DNA2, DNA replication helicase/nuclease 2, [Score=197, Expect=4e-55]} {Mouse: ENSMUSG00000036875, Dna2, DNA replication helicase/nuclease 2, [Score=202, Expect=4e-57]} {Dmel: FBgn0030170, CG2990, [Score=160, Expect=6e-43]} {Celegans: WBGene00001016, dna-2, Yeast DNA helicase/endonuclease family, [Score=131, Expect=4e-33]} {Smed: dd_Smed_v6_12638_0_4, dd_Smed_v6_12638_0_4, [RH, Score=159, Expect=2e-45]} {RNA1509_15095, RNA1509_56464} {RNA1310_18878.1, RNA1509_56464} {RNA1509_56464, RNA815_32957} |
Cumulative graph for MligTC455_19707
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.484 | 2.386 | 0.75728 | 1.00000 | |
| RegionR2 | -0.498 | 2.386 | 0.59548 | 0.94729 | |
| RegionR3 | 0.202 | 2.386 | 0.76168 | 1.00000 | |
| RegionR4 | 0.888 | 2.386 | 0.23769 | 0.53286 | |
| RegionR5 | 0.58 | 2.386 | 0.29471 | 0.62799 | |
| RegionR6 | 0.885 | 2.386 | 0.17514 | 0.73550 | |
| RegionR7 | -1.387 | 2.386 | 0.20792 | 0.82070 | |
| RegionR8 | -1.152 | 2.386 | 0.39161 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.89 | 2.386 | 0.37817 | 1.00000 | |
| RegenerationR2 | 0.415 | 2.386 | 0.65068 | 0.93670 | |
| RegenerationR3 | -0.191 | 2.386 | 0.80373 | 0.98352 | |
| RegenerationR4 | -0.43 | 2.386 | 0.59586 | 0.91158 | |
| RegenerationR5 | 0.743 | 2.386 | 0.23793 | 0.67169 | |
| RegenerationR6 | -0.087 | 2.386 | 0.92457 | 1.00000 | |
| RegenerationBL | 0.653 | 2.386 | 0.61102 | 0.95600 | |
| RegenerationTP | -3.416 | 2.386 | 0.16628 | 0.59718 |
Genes with expression patterns similar to MligTC455_19707
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19707 | 146 | 3.03 | Mlig455_060076 | Neo: Int S/G2/M Age: Up-Down-Down |
DNA2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_060076 {REF} {Length: 2519} {Pfam: AAA domain [PF13087.8, score=144.7]; AAA domain [PF13086.8, score=68.9]} {Human: ENSG00000138346, DNA2, DNA replication helicase/nuclease 2, [Score=197, Expect=4e-55]} {Mouse: ENSMUSG00000036875, Dna2, DNA replication helicase/nuclease 2, [Score=202, Expect=4e-57]} {Dmel: FBgn0030170, CG2990, [Score=160, Expect=6e-43]} {Celegans: WBGene00001016, dna-2, Yeast DNA helicase/endonuclease family, [Score=131, Expect=4e-33]} {Smed: dd_Smed_v6_12638_0_4, dd_Smed_v6_12638_0_4, [RH, Score=159, Expect=2e-45]} {RNA1509_15095, RNA1509_56464} {RNA1310_18878.1, RNA1509_56464} {RNA1509_56464, RNA815_32957} |
| 2. | MligTC455_52017 | 167 | 3.48 | Mlig455_067647 | Neo: Irradiation Age: - Region-enriched R5: 2.117/0.02703 |
1.824 | 0.870 | - | - | - | - | 0.954 | Mlig455_067647 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Protein aurora borealis N-terminus [PF15280.8, score=21.2]} {RNA1509_41161, RNA1509_55413} {RNA1310_19202.1, RNA1509_41161, RNA1509_55413} {RNA1509_41161, RNA1509_55413, RNA815_21758} | |
| 3. | MligTC455_35005 | 74 | 1.54 | Mlig455_069988 | Neo: - Age: Down-Up-Up |
NOTCH1 | 1.693 | - | - | 0.709 | - | 0.984 | - | Mlig455_069988 {REF} {Length: 1582} {Pfam: EGF-like domain [PF00008.29, score=21.2]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=52.0, Expect=1e-07]} {Mouse: ENSMUSG00000055333, Fat2, FAT atypical cadherin 2, [Score=50.4, Expect=3e-07]; ENSMUSG00000026923, Notch1, notch 1, [Score=48.9, Expect=1e-06]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=48.1, Expect=2e-06]} {Dmel: FBgn0259140, CG42255, [Score=53.5, Expect=2e-08]} {Celegans: WBGene00000792, crb-1, Drosophila CRumBs homolog, [Score=50.4, Expect=2e-07]} {RNA1509_48097} {RNA1310_33379} {RNA815_13326.1} |
| 4. | MligTC455_28700 | 84 | 1.76 | Mlig455_062682 | Neo: - Age: - |
CHERP | 0.961 | - | - | - | - | 0.961 | - | Mlig455_062682 {REF} {Length: 3833} {TRANSSPLICED} {Pfam: CID domain [PF04818.15, score=81.7]} {Human: ENSG00000085872, CHERP, calcium homeostasis endoplasmic reticulum protein, [RH, Score=140, Expect=2e-33]} {Mouse: ENSMUSG00000052488, Cherp, calcium homeostasis endoplasmic reticulum protein, [RH, Score=140, Expect=1e-33]} {Dmel: FBgn0261872, scaf6, SR-related CTD associated factor 6, [RH, Score=162, Expect=1e-40]} {Celegans: WBGene00006442, tag-65, SR-related CTD associated factor 6, [Score=89.7, Expect=3e-18]} {Smed: dd_Smed_v6_4684_0_1, dd_Smed_v6_4684_0_1, [RH, Score=193, Expect=4e-51]} {RNA1509_37244} {RNA1310_7506} {RNA815_19825} |
| 5. | MligTC455_13779 | 36 | 0.75 | Mlig455_058271 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_058271 {REF} {Length: 579} {NoTransDecoderORF} {RNA1509_56620} {RNA1310_126618} {RNA815_11857} |
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