Data search
Results for MligTC455_35005
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35005 | 74 | 1.54 | Mlig455_069988 | Neo: - Age: Down-Up-Up |
NOTCH1 | Mlig455_069988 {REF} {Length: 1582} {Pfam: EGF-like domain [PF00008.29, score=21.2]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=52.0, Expect=1e-07]} {Mouse: ENSMUSG00000055333, Fat2, FAT atypical cadherin 2, [Score=50.4, Expect=3e-07]; ENSMUSG00000026923, Notch1, notch 1, [Score=48.9, Expect=1e-06]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=48.1, Expect=2e-06]} {Dmel: FBgn0259140, CG42255, [Score=53.5, Expect=2e-08]} {Celegans: WBGene00000792, crb-1, Drosophila CRumBs homolog, [Score=50.4, Expect=2e-07]} {RNA1509_48097} {RNA1310_33379} {RNA815_13326.1} |
Cumulative graph for MligTC455_35005
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.606 | 1.5 | 1.00000 | 1.00000 | |
| RegionR2 | -1.014 | 1.5 | 0.96581 | 1.00000 | |
| RegionR3 | -0.653 | 1.5 | 0.95457 | 1.00000 | |
| RegionR4 | 2.862 | 1.5 | 0.32676 | 0.64460 | |
| RegionR5 | 1.824 | 1.5 | 0.23610 | 0.54532 | |
| RegionR6 | 1.983 | 1.5 | 0.20203 | 0.77460 | |
| RegionR7 | -3.004 | 1.5 | 1.00000 | 1.00000 | |
| RegionR8 | 3.608 | 1.5 | 0.07249 | 0.51483 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.95 | 1.5 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.312 | 1.5 | 0.77545 | 0.98202 | |
| RegenerationR3 | 0.798 | 1.5 | 0.57630 | 0.89712 | |
| RegenerationR4 | 0.608 | 1.5 | 0.53457 | 0.88611 | |
| RegenerationR5 | 1.255 | 1.5 | 0.49488 | 0.85589 | |
| RegenerationR6 | -1.264 | 1.5 | 0.41163 | 0.74518 | |
| RegenerationBL | -0.723 | 1.5 | 0.93066 | 1.00000 | |
| RegenerationTP | 0.712 | 1.5 | 0.74302 | 1.00000 |
Genes with expression patterns similar to MligTC455_35005
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35005 | 74 | 1.54 | Mlig455_069988 | Neo: - Age: Down-Up-Up |
NOTCH1 | 4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_069988 {REF} {Length: 1582} {Pfam: EGF-like domain [PF00008.29, score=21.2]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=52.0, Expect=1e-07]} {Mouse: ENSMUSG00000055333, Fat2, FAT atypical cadherin 2, [Score=50.4, Expect=3e-07]; ENSMUSG00000026923, Notch1, notch 1, [Score=48.9, Expect=1e-06]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=48.1, Expect=2e-06]} {Dmel: FBgn0259140, CG42255, [Score=53.5, Expect=2e-08]} {Celegans: WBGene00000792, crb-1, Drosophila CRumBs homolog, [Score=50.4, Expect=2e-07]} {RNA1509_48097} {RNA1310_33379} {RNA815_13326.1} |
| 2. | MligTC455_19707 | 146 | 3.03 | Mlig455_060076 | Neo: Int S/G2/M Age: Up-Down-Down |
DNA2 | 1.693 | - | - | 0.709 | - | 0.984 | - | Mlig455_060076 {REF} {Length: 2519} {Pfam: AAA domain [PF13087.8, score=144.7]; AAA domain [PF13086.8, score=68.9]} {Human: ENSG00000138346, DNA2, DNA replication helicase/nuclease 2, [Score=197, Expect=4e-55]} {Mouse: ENSMUSG00000036875, Dna2, DNA replication helicase/nuclease 2, [Score=202, Expect=4e-57]} {Dmel: FBgn0030170, CG2990, [Score=160, Expect=6e-43]} {Celegans: WBGene00001016, dna-2, Yeast DNA helicase/endonuclease family, [Score=131, Expect=4e-33]} {Smed: dd_Smed_v6_12638_0_4, dd_Smed_v6_12638_0_4, [RH, Score=159, Expect=2e-45]} {RNA1509_15095, RNA1509_56464} {RNA1310_18878.1, RNA1509_56464} {RNA1509_56464, RNA815_32957} |
| 3. | MligTC455_25254 | 743 | 15.47 | Mlig455_049843 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_049843 {REF} {Length: 1151} {TRANSSPLICED} {RNA1509_49186} {RNA1310_21634.1} {RNA815_18110} | |
| 4. | MligTC455_25832 | 10 | 0.2 | Mlig455_001680 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_001680 {REF} {Length: 1336} {RNA1509_32923} {RNA1310_71250, RNA1509_32923} {RNA1509_32923, RNA815_419.1} |
Berezikov Lab - 2020-2021 © ERIBA