Data search
Results for MligTC455_19728
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19728 | 819 | 17.07 | Mlig455_060222 | Neo: - Age: - |
APEX2 | Mlig455_060222 {REF} {Length: 2674} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=69.1]; GRF zinc finger [PF06839.14, score=42.3]; Endonuclease-reverse transcriptase [PF14529.8, score=32.6]} {Human: ENSG00000169188, APEX2, apurinic/apyrimidinic endodeoxyribonuclease 2, [RH, Score=313, Expect=4e-100]} {Mouse: ENSMUSG00000025269, Apex2, apurinic/apyrimidinic endonuclease 2, [RH, Score=303, Expect=2e-96]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [Score=73.2, Expect=3e-13]} {Smed: dd_Smed_v6_7402_0_2, dd_Smed_v6_7402_0_2, [RH, Score=260, Expect=6e-81]} {RNA1509_44887} {RNA1310_18191.1} {RNA815_14603} |
Cumulative graph for MligTC455_19728
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.724 | 4.398 | 0.01064 | 0.30104 | |
| RegionR2 | 1.888 | 4.398 | 0.00651 | 0.07633 | |
| RegionR3 | 1.222 | 4.398 | 0.08413 | 0.51374 | |
| RegionR4 | 0.476 | 4.398 | 0.58828 | 0.90359 | |
| RegionR5 | 1.335 | 4.398 | 0.03373 | 0.14104 | |
| RegionR6 | 0.953 | 4.398 | 0.21180 | 0.78958 | |
| RegionR7 | 0.663 | 4.398 | 0.47696 | 1.00000 | |
| RegionR8 | 1.187 | 4.398 | 0.20291 | 0.80181 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.911 | 4.398 | 0.08651 | 0.79008 | |
| RegenerationR2 | -0.159 | 4.398 | 0.69808 | 0.95561 | |
| RegenerationR3 | -0.064 | 4.398 | 0.88878 | 1.00000 | |
| RegenerationR4 | 0.073 | 4.398 | 0.87617 | 1.00000 | |
| RegenerationR5 | 0.097 | 4.398 | 0.82062 | 0.99455 | |
| RegenerationR6 | 0.461 | 4.398 | 0.32284 | 0.66911 | |
| RegenerationBL | 1.211 | 4.398 | 0.00946 | 0.09742 | |
| RegenerationTP | 0.272 | 4.398 | 0.63032 | 0.97804 |
Genes with expression patterns similar to MligTC455_19728
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19728 | 819 | 17.07 | Mlig455_060222 | Neo: - Age: - |
APEX2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_060222 {REF} {Length: 2674} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=69.1]; GRF zinc finger [PF06839.14, score=42.3]; Endonuclease-reverse transcriptase [PF14529.8, score=32.6]} {Human: ENSG00000169188, APEX2, apurinic/apyrimidinic endodeoxyribonuclease 2, [RH, Score=313, Expect=4e-100]} {Mouse: ENSMUSG00000025269, Apex2, apurinic/apyrimidinic endonuclease 2, [RH, Score=303, Expect=2e-96]} {Dmel: FBgn0004584, Rrp1, Recombination repair protein 1, [Score=73.2, Expect=3e-13]} {Smed: dd_Smed_v6_7402_0_2, dd_Smed_v6_7402_0_2, [RH, Score=260, Expect=6e-81]} {RNA1509_44887} {RNA1310_18191.1} {RNA815_14603} |
| 2. | MligTC455_29651 | 934 | 19.46 | Mlig455_055194 | Neo: Irradiation Age: - |
SYNE1 | 1.73 | - | - | - | 0.768 | - | 0.962 | Mlig455_055194 {REF} {Length: 5428} {Pfam: Spectrin repeat [PF00435.23, score=88.4]} {Human: ENSG00000131018, SYNE1, spectrin repeat containing nuclear envelope protein 1, [RH, Score=370, Expect=1e-106]} {Mouse: ENSMUSG00000096054, Syne1, spectrin repeat containing, nuclear envelope 1, [Score=389, Expect=1e-110]} {Dmel: FBgn0261836, Msp300, Muscle-specific protein 300 kDa, [Score=134, Expect=6e-31]} {Smed: dd_Smed_v6_5365_0_2, dd_Smed_v6_5365_0_2, [RH, Score=162, Expect=5e-40]} {RNA1509_2539} {RNA1310_140.1} {RNA815_913} |
| 3. | MligTC455_30218 | 2357 | 49.1 | Mlig455_021891, Mlig455_028635 | Neo: - |
1.677 | - | - | - | 0.952 | - | 0.725 | Mlig455_021891 {REF} {Length: 825} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1} Mlig455_028635 {REF} {Length: 952} {TRANSSPLICED} {RNA1509_58464} {RNA1310_7844.1} {RNA815_2198.1} |
|
| 4. | MligTC455_25156 | 336 | 6.99 | Mlig455_027587 | Neo: - Age: logFC(26M/2M)=-0.277 |
YWHAE | 0.963 | - | - | - | 0.963 | - | - | Mlig455_027587 {REF} {Length: 2509} {TRANSSPLICED} {Pfam: 14-3-3 protein [PF00244.22, score=348.0]; Sodium:neurotransmitter symporter family [PF00209.20, score=222.5]} {Human: ENSG00000108953, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=384, Expect=2e-132]; ENSG00000274474, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=384, Expect=2e-132]} {Mouse: ENSMUSG00000020849, Ywhae, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide, [RH, Score=384, Expect=1e-132]} {Dmel: FBgn0020238, 14-3-3epsilon, [RH, Score=384, Expect=1e-132]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [Score=311, Expect=6e-104]} {Smed: dd_Smed_v6_1702_0_1, dd_Smed_v6_1702_0_1, [RH, Score=347, Expect=4e-118]} {RNA1509_26028, RNA1509_32652, RNA1509_5197} {RNA1310_6272.1, RNA1509_26028, RNA1509_32652} {RNA1509_26028, RNA1509_32652, RNA815_5359.1} |
| 5. | MligTC455_47365 | 162 | 3.38 | Mlig455_060241 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_060241 {REF} {Length: 2435} {TRANSSPLICED} {RNA1509_52272} {RNA1310_20010.2, RNA1509_52272} {RNA1509_52272, RNA815_28545} |
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