Data search
Results for MligTC455_19831
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19831 | 411 | 8.56 | Mlig455_021736 | Neo: - Age: logFC(26M/2M)=0.431 Region-enriched R5: 2.122/0.01672 |
ALKBH6 | Mlig455_021736 {REF} {Length: 900} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=47.2]} {Human: ENSG00000239382, ALKBH6, alkB homolog 6, [RH, Score=219, Expect=5e-71]} {Mouse: ENSMUSG00000042831, Alkbh6, alkB homolog 6, [RH, Score=227, Expect=3e-74]} {Dmel: FBgn0032259, CG6144, [RH, Score=190, Expect=3e-60]} {Celegans: WBGene00007202, B0564.2, [RH, Score=175, Expect=2e-54]} {Smed: dd_Smed_v6_20520_0_1, dd_Smed_v6_20520_0_1, [RH, Score=200, Expect=3e-64]} {RNA1310_40810} {RNA815_23286} |
Cumulative graph for MligTC455_19831
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.389 | 3.557 | 0.03643 | 0.47198 | |
| RegionR2 | 1.781 | 3.557 | 0.06115 | 0.29801 | |
| RegionR3 | 1.567 | 3.557 | 0.06063 | 0.43361 | |
| RegionR4 | 1.177 | 3.557 | 0.19480 | 0.47254 | |
| RegionR5 | 2.122 | 3.557 | 0.00189 | 0.01672 | |
| RegionR6 | 1.173 | 3.557 | 0.19258 | 0.76037 | |
| RegionR7 | -0.308 | 3.557 | 0.92992 | 1.00000 | |
| RegionR8 | -0.123 | 3.557 | 0.89462 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.276 | 3.557 | 0.18723 | 0.92750 | |
| RegenerationR2 | -0.742 | 3.557 | 0.21945 | 0.66715 | |
| RegenerationR3 | 0.2 | 3.557 | 0.74725 | 0.96336 | |
| RegenerationR4 | 0.5 | 3.557 | 0.44096 | 0.83752 | |
| RegenerationR5 | -0.434 | 3.557 | 0.45548 | 0.83354 | |
| RegenerationR6 | -0.315 | 3.557 | 0.64534 | 0.89611 | |
| RegenerationBL | 0.691 | 3.557 | 0.37391 | 0.74236 | |
| RegenerationTP | 2.401 | 3.557 | 0.00219 | 0.07582 |
Genes with expression patterns similar to MligTC455_19831
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19831 | 411 | 8.56 | Mlig455_021736 | Neo: - Age: logFC(26M/2M)=0.431 Region-enriched R5: 2.122/0.01672 |
ALKBH6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021736 {REF} {Length: 900} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=47.2]} {Human: ENSG00000239382, ALKBH6, alkB homolog 6, [RH, Score=219, Expect=5e-71]} {Mouse: ENSMUSG00000042831, Alkbh6, alkB homolog 6, [RH, Score=227, Expect=3e-74]} {Dmel: FBgn0032259, CG6144, [RH, Score=190, Expect=3e-60]} {Celegans: WBGene00007202, B0564.2, [RH, Score=175, Expect=2e-54]} {Smed: dd_Smed_v6_20520_0_1, dd_Smed_v6_20520_0_1, [RH, Score=200, Expect=3e-64]} {RNA1310_40810} {RNA815_23286} |
| 2. | MligTC455_51318 | 370 | 7.71 | Mlig455_040327 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.854 Region-enriched R5: 1.980/0.00436 |
RAD51C | 1.799 | 0.847 | - | - | 0.952 | - | - | Mlig455_040327 {REF} {Length: 1394} {Pfam: Rad51 [PF08423.13, score=138.5]; AAA domain [PF13481.8, score=35.5]; KaiC [PF06745.15, score=18.8]} {Human: ENSG00000108384, RAD51C, RAD51 paralog C, [RH, Score=183, Expect=1e-53]} {Mouse: ENSMUSG00000007646, Rad51c, RAD51 paralog C, [RH, Score=181, Expect=4e-53]} {Dmel: FBgn0003482, spn-D, spindle D, [RH, Score=110, Expect=1e-27]} {Celegans: WBGene00004297, rad-51, RAD51 short isoform; RecA/Rad51/Dmc1-like protein, [Score=70.1, Expect=4e-13]} {Smed: dd_Smed_v6_16724_0_2, dd_Smed_v6_16724_0_2, [RH, Score=184, Expect=2e-55]} {RNA1509_27617} {RNA1310_25633.1} {RNA815_20829} |
| 3. | MligTC455_34953 | 479 | 9.99 | Mlig455_010539 | Neo: - Age: Down-Up-Up |
CENPS-CORT | 1.709 | 0.739 | - | - | - | - | 0.970 | Mlig455_010539 {REF} {Length: 602} {TRANSSPLICED} {Pfam: CENP-S protein [PF15630.8, score=80.6]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=25.9]} {Human: ENSG00000251503, CENPS-CORT, CENPS-CORT readthrough, [RH, Score=78.2, Expect=1e-18]; ENSG00000175279, CENPS, centromere protein S, [RH, Score=78.2, Expect=1e-18]} {Mouse: ENSMUSG00000073705, Cenps, centromere protein S, [RH, Score=80.1, Expect=1e-19]} {Celegans: WBGene00013014, Y48E1C.1, [Score=49.7, Expect=1e-07]} {Smed: dd_Smed_v6_6312_0_1, dd_Smed_v6_6312_0_1, [RH, Score=58.2, Expect=1e-11]} {RNA1509_13037} {RNA1310_36934.2} {RNA815_18143} |
| 4. | MligTC455_49438 | 801 | 16.68 | Mlig455_012610 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R4: 1.791/0.00443 |
C9orf85 | 1.662 | - | 0.711 | - | - | - | 0.951 | Mlig455_012610 {REF} {Length: 675} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2039) [PF10217.11, score=86.8]} {Human: ENSG00000155621, C9orf85, chromosome 9 open reading frame 85, [RH, Score=112, Expect=8e-31]} {Mouse: ENSMUSG00000035171, 1110059E24Rik, RIKEN cDNA 1110059E24 gene, [RH, Score=112, Expect=2e-31]} {Dmel: FBgn0030834, CG8675, [RH, Score=112, Expect=1e-30]} {Smed: dd_Smed_v6_8807_0_1, dd_Smed_v6_8807_0_1, [RH, Score=104, Expect=3e-28]} {RNA1509_23122, RNA1509_57242} {RNA1310_54864.2, RNA1509_23122, RNA1509_57242} {RNA1509_23122, RNA1509_57242, RNA815_26692} |
| 5. | MligTC455_23531 | 1051 | 21.9 | Mlig455_008940 | Neo: - Age: - |
PYCR2 | 1.653 | - | 0.702 | - | - | - | 0.951 | Mlig455_008940 {REF} {Length: 1238} {TRANSSPLICED} {Pfam: Pyrroline-5-carboxylate reductase dimerisation [PF14748.8, score=131.4]; NADP oxidoreductase coenzyme F420-dependent [PF03807.19, score=79.6]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=22.8]; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus [PF01210.25, score=21.7]; Ornithine cyclodeaminase/mu-crystallin family [PF02423.17, score=19.5]; Rossmann-like domain [PF10727.11, score=19.5]; Shikimate / quinate 5-dehydrogenase [PF01488.22, score=19.0]} {Human: ENSG00000143811, PYCR2, pyrroline-5-carboxylate reductase 2, [RH, Score=235, Expect=1e-75]; ENSG00000183010, PYCR1, pyrroline-5-carboxylate reductase 1, [RH, Score=232, Expect=1e-74]} {Mouse: ENSMUSG00000025140, Pycr1, pyrroline-5-carboxylate reductase 1, [RH, Score=232, Expect=1e-74]; ENSMUSG00000026520, Pycr2, pyrroline-5-carboxylate reductase family, member 2, [RH, Score=228, Expect=3e-73]} {Dmel: FBgn0038516, P5cr-2, Pyrroline-5-carboxylate reductase-like 2, [RH, Score=221, Expect=4e-71]} {Celegans: WBGene00010924, M153.1, [RH, Score=223, Expect=5e-72]} {Smed: dd_Smed_v6_3217_0_2, dd_Smed_v6_3217_0_2, [RH, Score=168, Expect=9e-51]} {RNA1509_5212} {RNA1310_10890} {RNA815_11280.1} |
| 6. | MligTC455_16929 | 712 | 14.82 | Mlig455_052920 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.572/0.00000 |
HBS1L | 0.988 | - | - | - | - | - | 0.988 | Mlig455_052920 {REF} {Length: 2506} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=148.0]; Uncharacterised protein family UPF0047 [PF01894.19, score=125.2]; Elongation factor Tu C-terminal domain [PF03143.19, score=53.4]; 50S ribosome-binding GTPase [PF01926.25, score=25.3]} {Human: ENSG00000112339, HBS1L, HBS1 like translational GTPase, [RH, Score=441, Expect=2e-145]} {Mouse: ENSMUSG00000019977, Hbs1l, Hbs1-like (S. cerevisiae), [RH, Score=405, Expect=3e-131]} {Dmel: FBgn0042712, HBS1, [RH, Score=414, Expect=6e-135]} {Celegans: WBGene00010622, K07A12.4, [RH, Score=337, Expect=4e-106]} {Smed: dd_Smed_v6_9327_0_1, dd_Smed_v6_9327_0_1, [RH, Score=397, Expect=4e-129]} {RNA1509_18150} {RNA1310_11738} {RNA815_5048.1} |
| 7. | MligTC455_16928 | 753 | 15.68 | Mlig455_052906 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.417/0.00004 |
0.977 | - | - | - | - | - | 0.977 | Mlig455_052906 {REF} {Length: 657} {TRANSSPLICED} {Pfam: Uncharacterised protein family UPF0047 [PF01894.19, score=129.2]} {Dmel: FBgn0263355, CG31688, [RH, Score=173, Expect=2e-55]} {Smed: dd_Smed_v6_5221_0_1, dd_Smed_v6_5221_0_1, [RH, Score=185, Expect=2e-61]} {RNA1509_20768, RNA1509_26245} {RNA1310_18267, RNA1509_20768, RNA1509_26245} {RNA1509_20768, RNA1509_26245, RNA815_23695.2} | |
| 8. | MligTC455_39028 | 780 | 16.26 | Mlig455_056783 | Neo: - Age: - |
AIFM3 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_056783 {REF} {Length: 3601} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=132.4]; Rieske [2Fe-2S] domain [PF00355.28, score=53.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=49.4]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=23.2]; Rieske-like [2Fe-2S] domain [PF13806.8, score=19.3]; Putative NAD(P)-binding [PF13241.8, score=19.1]} {Human: ENSG00000183773, AIFM3, apoptosis inducing factor, mitochondria associated 3, [RH, Score=268, Expect=2e-81]} {Mouse: ENSMUSG00000022763, Aifm3, apoptosis-inducing factor, mitochondrion-associated 3, [RH, Score=270, Expect=2e-82]} {Dmel: FBgn0025628, CG4199, [RH, Score=270, Expect=1e-82]} {Celegans: WBGene00017640, F20D6.11, [RH, Score=224, Expect=7e-66]} {RNA1509_16919} {RNA1310_15591.2, RNA1509_16919} {RNA1509_16919, RNA815_2718.1} |
| 9. | MligTC455_40356 | 51 | 1.05 | Mlig455_016232 | Neo: - Age: - |
0.962 | - | - | - | - | 0.962 | - | Mlig455_016232 {REF} {Length: 1479} {Pfam: Destabilase [PF05497.14, score=99.9]} {Dmel: FBgn0025827, CG6421, [Score=55.5, Expect=4e-10]} {Celegans: WBGene00016669, ilys-2, Invertebrate-type lysozyme 2, [RH, Score=88.2, Expect=6e-23]} {RNA1509_50721} {RNA1310_33163} {RNA815_21535} | |
| 10. | MligTC455_49440 | 811 | 16.89 | Mlig455_065303 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.322 |
SNRPD2 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_065303 {REF} {Length: 1514} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=66.3]} {Human: ENSG00000125743, SNRPD2, small nuclear ribonucleoprotein D2 polypeptide, [RH, Score=151, Expect=2e-48]} {Mouse: ENSMUSG00000040824, Snrpd2, small nuclear ribonucleoprotein D2, [RH, Score=151, Expect=1e-48]} {Dmel: FBgn0261789, SmD2, Small ribonucleoprotein particle protein SmD2, [RH, Score=155, Expect=5e-50]} {Celegans: WBGene00004917, snr-4, Probable small nuclear ribonucleoprotein Sm D2, [RH, Score=162, Expect=4e-53]} {Smed: dd_Smed_v6_2994_0_1, dd_Smed_v6_2994_0_1, [RH, Score=143, Expect=1e-45]} {RNA1509_26843, RNA1509_28065, RNA1509_31534, RNA1509_8646} {RNA1310_73674, RNA1509_26843, RNA1509_28065, RNA1509_31534, RNA1509_8646} {RNA1509_26843, RNA1509_28065, RNA1509_31534, RNA1509_8646, RNA815_32933} |
| 11. | MligTC455_50648 | 306 | 6.37 | Mlig455_058791, Mlig455_070063 | Neo: Neoblast Age: logFC(26M/2M)=0.352 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_058791 {REF} {Length: 750} {TRANSSPLICED} {RNA1509_47375, RNA1509_55340} {RNA1310_47459.1, RNA1509_47375, RNA1509_55340} {RNA1509_47375, RNA1509_55340, RNA815_32902} Mlig455_070063 {REF} {Length: 785} {TRANSSPLICED} {RNA1509_55340} {RNA1310_47459.1} {RNA815_32902} |
|
| 12. | MligTC455_30445 | 523 | 10.89 | Mlig455_063582 | Neo: - Age: - |
ITPKC | 0.96 | - | - | - | - | - | 0.960 | Mlig455_063582 {REF} {Length: 2820} {TRANSSPLICED} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=109.3]} {Human: ENSG00000086544, ITPKC, inositol-trisphosphate 3-kinase C, [RH, Score=276, Expect=8e-87]} {Mouse: ENSMUSG00000003752, Itpkc, inositol 1,4,5-trisphosphate 3-kinase C, [RH, Score=281, Expect=6e-89]} {Dmel: FBgn0283680, IP3K2, Inositol 1,4,5-triphosphate kinase 2, [Score=251, Expect=1e-79]} {Celegans: WBGene00002979, lfe-2, Inositol-trisphosphate 3-kinase homolog, [Score=200, Expect=6e-61]} {Smed: dd_Smed_v6_3687_0_1, dd_Smed_v6_3687_0_1, [RH, Score=242, Expect=4e-75]} {RNA1509_34871} {RNA1310_22346.1, RNA1509_34871} {RNA1509_34871, RNA815_11408} |
| 13. | MligTC455_53061 | 732 | 15.26 | Mlig455_068243 | Neo: - Age: - Region-enriched R3: 1.306/0.01915 |
SPTLC2 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_068243 {REF} {Length: 3365} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=168.0]; Beta-eliminating lyase [PF01212.23, score=19.8]} {Human: ENSG00000100596, SPTLC2, serine palmitoyltransferase long chain base subunit 2, [RH, Score=596, Expect=0.0]; ENSG00000172296, SPTLC3, serine palmitoyltransferase long chain base subunit 3, [RH, Score=569, Expect=0.0]} {Mouse: ENSMUSG00000021036, Sptlc2, serine palmitoyltransferase, long chain base subunit 2, [RH, Score=602, Expect=0.0]} {Dmel: FBgn0002524, lace, [RH, Score=502, Expect=3e-173]} {Celegans: WBGene00018398, sptl-2, Serine palmitoyltransferase 2, [RH, Score=508, Expect=1e-175]} {Smed: dd_Smed_v6_4337_0_1, dd_Smed_v6_4337_0_1, [RH, Score=617, Expect=0.0]} {RNA1509_16682, RNA1509_20535} {RNA1310_11412.1, RNA1509_16682, RNA1509_20535} {RNA1509_16682, RNA1509_20535, RNA815_4113} |
| 14. | MligTC455_41639 | 740 | 15.41 | Mlig455_049067 | Neo: - Age: Down-Down-Up Region-enriched R5: 1.676/0.00031 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_049067 {REF} {Length: 1380} {TRANSSPLICED} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=29.4]; Ankyrin repeat [PF00023.32, score=20.3]; Ankyrin repeats (3 copies) [PF12796.9, score=20.2]} {RNA1509_12522} {RNA1310_20494} {RNA815_11245} | |
| 15. | MligTC455_12148 | 32 | 0.67 | Mlig455_039420 | Neo: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_039420 {REF} {Length: 1719} {Pfam: Predicted membrane protein (DUF2207) [PF09972.11, score=23.0]; Putative Actinobacterial Holin-X, holin superfamily III [PF07332.13, score=22.2]} {RNA1310_30045} {RNA815_23539} |
Berezikov Lab - 2020-2021 © ERIBA