TomoSeq data search

Data search

Results for MligTC455_19833

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19833	61	1.28	Mlig455_014399	Neo: - Age: -		Mlig455_014399 {REF} {Length: 1151} {Pfam: dUTPase [PF00692.21, score=48.4]} {RNA1310_102290}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_19833

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.058	1.589	0.99961	1.00000
RegionR2	-2.482	1.589	0.99964	1.00000
RegionR3	3.049	1.589	0.00561	0.10287
RegionR4	0.993	1.589	0.29604	0.60777
RegionR5	1.426	1.589	0.16449	0.42901
RegionR6	2.754	1.589	0.01875	0.24504
RegionR7	1.368	1.589	0.30902	0.94309
RegionR8	-3.049	1.589	0.99976	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.624	1.589	0.99999	1.00000
RegenerationR2	2.91	1.589	0.04749	0.35975
RegenerationR3	0.687	1.589	0.45680	0.83607
RegenerationR4	0.725	1.589	0.49247	0.86564
RegenerationR5	0.124	1.589	0.89038	1.00000
RegenerationR6	-0.402	1.589	0.68512	0.91680
RegenerationBL	0.693	1.589	0.65910	0.99405
RegenerationTP	-1.679	1.589	0.99984	1.00000

Genes with expression patterns similar to MligTC455_19833

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19833	61	1.28	Mlig455_014399	Neo: - Age: -		5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_014399 {REF} {Length: 1151} {Pfam: dUTPase [PF00692.21, score=48.4]} {RNA1310_102290}
2.	MligTC455_42327	18	0.38	Mlig455_007524	Neo: - Age: -		0.99	-	-	-	-	0.990	-	Mlig455_007524 {REF} {Length: 4524} {Pfam: Immunoglobulin domain [PF13895.8, score=69.8]; Immunoglobulin I-set domain [PF07679.18, score=40.3]; Immunoglobulin domain [PF13927.8, score=38.1]; Immunoglobulin domain [PF00047.27, score=27.4]; Izumo-like Immunoglobulin domain [PF16706.7, score=24.1]; Immunoglobulin V-set domain [PF07686.19, score=22.8]} {RNA1509_58583} {RNA1310_91007} {RNA815_37856}
3.	MligTC455_20848	19	0.4	Mlig455_007509	Neo: - Age: -		0.984	-	-	-	-	0.984	-	Mlig455_007509 {REF} {Length: 3648} {Pfam: Immunoglobulin domain [PF13895.8, score=49.0]; Immunoglobulin domain [PF13927.8, score=43.5]; Immunoglobulin domain [PF00047.27, score=29.1]; Immunoglobulin I-set domain [PF07679.18, score=29.0]; Izumo-like Immunoglobulin domain [PF16706.7, score=21.1]; Immunoglobulin V-set domain [PF07686.19, score=20.5]} {Mouse: ENSMUSG00000061462, Obscn, obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, [Score=50.1, Expect=9e-06]} {RNA1509_58583} {RNA1310_91007} {RNA815_37856}
4.	MligTC455_42328	21	0.44	Mlig455_007412	Neo: - Age: -		0.974	-	-	-	-	0.974	-	Mlig455_007412 {REF} {Length: 3904} {Pfam: Immunoglobulin domain [PF13895.8, score=50.0]; Immunoglobulin domain [PF13927.8, score=42.6]; Immunoglobulin I-set domain [PF07679.18, score=29.9]; Immunoglobulin domain [PF00047.27, score=27.2]; Izumo-like Immunoglobulin domain [PF16706.7, score=21.5]; F5/8 type C domain [PF00754.27, score=20.9]; Immunoglobulin V-set domain [PF07686.19, score=19.5]} {Mouse: ENSMUSG00000061462, Obscn, obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, [Score=52.0, Expect=4e-06]} {RNA1509_58583} {RNA1310_91007} {RNA815_37856}
5.	MligTC455_46100	3	0.06	Mlig455_046242	Neo: - Age: -		0.973	-	-	-	-	0.973	-	Mlig455_046242 {REF} {Length: 959} {Pfam: RNase H [PF00075.26, score=49.6]} {RNA1509_30369} {RNA1310_1991} {RNA815_1648}
6.	MligTC455_42329	23	0.48	Mlig455_067682	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_067682 {REF} {Length: 3699} {Pfam: Immunoglobulin domain [PF13895.8, score=59.5]; Immunoglobulin domain [PF13927.8, score=40.0]; Immunoglobulin I-set domain [PF07679.18, score=32.9]; Izumo-like Immunoglobulin domain [PF16706.7, score=29.3]; Immunoglobulin domain [PF00047.27, score=23.8]; Immunoglobulin V-set domain [PF07686.19, score=20.9]; F5/8 type C domain [PF00754.27, score=20.1]} {Mouse: ENSMUSG00000061462, Obscn, obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, [Score=58.5, Expect=6e-08]} {RNA1509_58583} {RNA1310_84845} {RNA815_37856}
7.	MligTC455_12182	20	0.41	Mlig455_040697	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_040697 {REF} {Length: 543} {NoTransDecoderORF}
8.	MligTC455_36571	225	4.68	Mlig455_018019	Neo: - Age: Up-Down-Down Region-enriched R4: 2.466/0.03928		0.966	-	-	-	-	0.966	-	Mlig455_018019 {REF} {Length: 3541} {RNA1509_41400} {RNA1310_4515.1} {RNA815_3928}
9.	MligTC455_13523	27	0.56	Mlig455_068497	Neo: - Age: -	SBK1	0.965	-	-	-	-	0.965	-	Mlig455_068497 {REF} {Length: 1384} {Pfam: Protein kinase domain [PF00069.27, score=133.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=103.2]; Kinase-like [PF14531.8, score=18.7]} {Human: ENSG00000188322, SBK1, SH3 domain binding kinase 1, [Score=242, Expect=7e-76]} {Mouse: ENSMUSG00000042978, Sbk1, SH3-binding kinase 1, [Score=242, Expect=4e-76]} {Dmel: FBgn0034137, CG4945, [RH, Score=200, Expect=8e-59]} {Celegans: WBGene00009326, F32D8.1, [Score=109, Expect=6e-27]} {Smed: dd_Smed_v6_8041_0_1, dd_Smed_v6_8041_0_1, [Score=98.6, Expect=4e-23]} {RNA1310_104030}
10.	MligTC455_49030	12	0.24	Mlig455_028225	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.839	SYT3	0.961	-	-	-	-	0.961	-	Mlig455_028225 {REF} {Length: 3004} {Pfam: C2 domain [PF00168.32, score=61.2]} {Human: ENSG00000213023, SYT3, synaptotagmin 3, [Score=75.9, Expect=2e-14]} {Mouse: ENSMUSG00000030731, Syt3, synaptotagmin III, [Score=74.7, Expect=4e-14]; ENSMUSG00000062542, Syt9, synaptotagmin IX, [Score=71.6, Expect=3e-13]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=59.3, Expect=2e-09]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=59.7, Expect=1e-09]} {Smed: dd_Smed_v6_25279_0_1, dd_Smed_v6_25279_0_1, [Score=87.8, Expect=2e-19]} {RNA1310_53959} {RNA815_36451}
11.	MligTC455_07250	20	0.42	Mlig455_045061	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_045061 {REF} {Length: 2075} {RNA1310_108250} {RNA815_9898}
12.	MligTC455_27581	48	1	Mlig455_024052	Neo: - Age: Down-Down-Up	CRB2	0.96	-	-	-	0.960	-	-	Mlig455_024052 {REF} {Length: 7778} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=271.1]; Human growth factor-like EGF [PF12661.9, score=133.5]; Laminin G domain [PF02210.26, score=43.1]; Laminin G domain [PF00054.25, score=25.3]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=337, Expect=2e-94]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=340, Expect=2e-95]} {Dmel: FBgn0259685, crb, crumbs, [Score=378, Expect=1e-105]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=207, Expect=3e-53]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=223, Expect=5e-58]} {RNA1509_32484} {RNA1310_6715.1} {RNA815_693.1}
13.	MligTC455_30770	6	0.13	Mlig455_028957, Mlig455_068819	Neo: - Age: Up-Down-Up		0.959	-	-	-	-	0.959	-	Mlig455_028957 {REF} {Length: 921} {Pfam: SAP domain [PF02037.29, score=37.1]} {RNA1310_34705} Mlig455_068819 {REF} {Length: 3949} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=39.8]; Phage integrase family [PF00589.24, score=22.4]} {RNA1310_34705} {RNA815_30939}
14.	MligTC455_37966	132	2.75	Mlig455_068209	Neo: Int S/G2/M Age: - Region-enriched R5: 3.816/0.00001 Regeneration-upregulated R3: 5.497 Regeneration-enriched R3: 5.497	SPO11	0.958	-	-	-	0.958	-	-	Mlig455_068209 {REF} {Length: 2220} {TRANSSPLICED} {Pfam: Type IIB DNA topoisomerase [PF04406.16, score=52.9]} {Human: ENSG00000054796, SPO11, SPO11, initiator of meiotic double stranded breaks, [RH, Score=147, Expect=2e-40]} {Mouse: ENSMUSG00000005883, Spo11, SPO11 meiotic protein covalently bound to DSB, [RH, Score=152, Expect=2e-42]} {Dmel: FBgn0002716, mei-W68, meiotic W68, [RH, Score=100, Expect=5e-24]} {Celegans: WBGene00004985, spo-11, Meiotic recombination protein spo-11, [RH, Score=121, Expect=7e-31]} {Smed: dd_Smed_v6_43889_0_1, dd_Smed_v6_43889_0_1, [RH, Score=94.7, Expect=4e-23]} {RNA1509_18827} {RNA1310_30958} {RNA815_2962.1}
15.	MligTC455_41718	142	2.95	Mlig455_018102, Mlig455_059514	Neo: - Age: Down-Up-Up	GSTP1, HPGDS	0.957	-	-	-	-	0.957	-	Mlig455_018102 {REF} {Length: 1120} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=52.4]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=42.4]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=23.5]} {Human: ENSG00000163106, HPGDS, hematopoietic prostaglandin D synthase, [Score=85.9, Expect=2e-20]} {Mouse: ENSMUSG00000097830, Gstp1, glutathione S-transferase, pi 1, [Score=81.6, Expect=9e-19]; ENSMUSG00000060803, Gstp1, glutathione S-transferase, pi 1, [Score=81.6, Expect=9e-19]; ENSMUSG00000097808, Gstp2, glutathione S-transferase, pi 2, [Score=77.8, Expect=2e-17]; ENSMUSG00000038155, Gstp2, glutathione S-transferase, pi 2, [Score=77.8, Expect=2e-17]} {Dmel: FBgn0010226, GstS1, Glutathione S transferase S1, [Score=70.9, Expect=9e-15]} {Celegans: WBGene00001768, gst-20, Glutathione S-Transferase, [Score=90.9, Expect=1e-22]} {Smed: dd_Smed_v6_816_0_1, dd_Smed_v6_816_0_1, [Score=69.3, Expect=1e-14]} {RNA1509_2839} {RNA1310_26147} {RNA815_16772.1} Mlig455_059514 {REF} {Length: 614} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=48.9]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=43.8]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=20.3]} {Human: ENSG00000084207, GSTP1, glutathione S-transferase pi 1, [Score=70.1, Expect=2e-14]} {Mouse: ENSMUSG00000060803, Gstp1, glutathione S-transferase, pi 1, [Score=70.5, Expect=1e-14]; ENSMUSG00000097830, Gstp1, glutathione S-transferase, pi 1, [Score=70.5, Expect=1e-14]; ENSMUSG00000097808, Gstp2, glutathione S-transferase, pi 2, [Score=68.6, Expect=6e-14]; ENSMUSG00000038155, Gstp2, glutathione S-transferase, pi 2, [Score=68.6, Expect=6e-14]} {Celegans: WBGene00001768, gst-20, Glutathione S-Transferase, [Score=80.1, Expect=1e-18]} {Smed: dd_Smed_v6_816_0_1, dd_Smed_v6_816_0_1, [Score=63.5, Expect=2e-12]} {RNA1509_2839} {RNA1310_26147} {RNA815_16772.1}
16.	MligTC455_50652	76	1.59	Mlig455_017802	Neo: - Age: Up-Down-Up		0.957	-	-	-	-	0.957	-	Mlig455_017802 {REF} {Length: 3291} {Smed: dd_Smed_v6_11519_0_1, dd_Smed_v6_11519_0_1, [Score=139, Expect=2e-36]} {RNA1509_31680} {RNA1310_4085.1} {RNA815_1170.1}
17.	MligTC455_13666	6	0.12	Mlig455_037836, Mlig455_037935	Neo: - Age: Down-Up-Down	SAMD1	0.955	-	-	-	-	0.955	-	Mlig455_037836 {REF} {Length: 2931} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=36.0]; SAM domain (Sterile alpha motif) [PF07647.19, score=30.2]; Sterile alpha motif (SAM)/Pointed domain [PF02198.18, score=18.5]} {Human: ENSG00000141858, SAMD1, sterile alpha motif domain containing 1, [Score=73.9, Expect=2e-13]} {Mouse: ENSMUSG00000079003, Samd1, sterile alpha motif domain containing 1, [Score=73.6, Expect=2e-13]} {Dmel: FBgn0024993, CG2662, [Score=65.9, Expect=3e-11]} {Smed: dd_Smed_v6_11245_0_1, dd_Smed_v6_11245_0_1, [Score=82.4, Expect=2e-16]} {RNA1310_24465} {RNA815_45357} Mlig455_037935 {REF} {Length: 2883} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=36.1]; SAM domain (Sterile alpha motif) [PF07647.19, score=30.2]} {Human: ENSG00000141858, SAMD1, sterile alpha motif domain containing 1, [Score=74.7, Expect=9e-14]} {Mouse: ENSMUSG00000079003, Samd1, sterile alpha motif domain containing 1, [Score=74.3, Expect=9e-14]} {Dmel: FBgn0024993, CG2662, [Score=65.9, Expect=3e-11]} {Smed: dd_Smed_v6_11245_0_2, dd_Smed_v6_11245_0_2, [Score=83.6, Expect=7e-17]} {RNA1310_24465} {RNA815_45357}
18.	MligTC455_30931	8	0.17	Mlig455_058745	Neo: - Age: -	TBCCD1	0.954	-	-	-	-	0.954	-	Mlig455_058745 {REF} {Length: 2416} {TRANSSPLICED} {Pfam: Tubulin binding cofactor C [PF07986.14, score=81.3]} {Human: ENSG00000113838, TBCCD1, TBCC domain containing 1, [RH, Score=244, Expect=3e-72]} {Mouse: ENSMUSG00000004462, Tbccd1, TBCC domain containing 1, [RH, Score=246, Expect=4e-73]} {Smed: dd_Smed_v6_12514_0_1, dd_Smed_v6_12514_0_1, [RH, Score=324, Expect=1e-102]} {RNA1509_44730} {RNA1310_4807.1} {RNA815_3591}
19.	MligTC455_11612	12	0.25	Mlig455_052732	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_052732 {REF} {Length: 296} {NoTransDecoderORF}
20.	MligTC455_14034	25	0.52	Mlig455_001196	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_001196 {REF} {Length: 1906} {RNA1509_36146} {RNA1310_50710} {RNA815_46064}