M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_20848

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20848 19 0.40 Mlig455_007509

Neo: -

Age: -

 Mlig455_007509 {REF} {Length: 3648} {Pfam: Immunoglobulin domain [PF13895.8, score=49.0]; Immunoglobulin domain [PF13927.8, score=43.5]; Immunoglobulin domain [PF00047.27, score=29.1]; Immunoglobulin I-set domain [PF07679.18, score=29.0]; Izumo-like Immunoglobulin domain [PF16706.7, score=21.1]; Immunoglobulin V-set domain [PF07686.19, score=20.5]} {Mouse: ENSMUSG00000061462, Obscn, obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, [Score=50.1, Expect=9e-06]} {RNA1509_58583} {RNA1310_91007} {RNA815_37856}

Cumulative graph for MligTC455_20848

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.675 1.023 0.99956 1.00000
RegionR2 0.655 1.023 0.71371 1.00000
RegionR3 1.843 1.023 0.17310 0.69945
RegionR4 2.464 1.023 0.10009 0.30761
RegionR5 -0.523 1.023 0.73218 1.00000
RegionR6 -1.752 1.023 0.99957 1.00000
RegionR7 -0.588 1.023 0.99961 1.00000
RegionR8 -0.424 1.023 0.99955 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.039 1.023 0.99995 1.00000
RegenerationR2 1.653 1.023 0.26898 0.71472
RegenerationR3 2.335 1.023 0.06577 0.43159
RegenerationR4 -0.265 1.023 0.82267 0.99524
RegenerationR5 1.169 1.023 0.41371 0.80788
RegenerationR6 2.199 1.023 0.30467 0.65396
RegenerationBL -0.003 1.023 0.99998 1.00000
RegenerationTP 0.063 1.023 0.99996 1.00000


Genes with expression patterns similar to MligTC455_20848

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20848 19 0.4 Mlig455_007509

Neo: -

Age: -

 4 1.000 1.000 - - 1.000 1.000 Mlig455_007509 {REF} {Length: 3648} {Pfam: Immunoglobulin domain [PF13895.8, score=49.0]; Immunoglobulin domain [PF13927.8, score=43.5]; Immunoglobulin domain [PF00047.27, score=29.1]; Immunoglobulin I-set domain [PF07679.18, score=29.0]; Izumo-like Immunoglobulin domain [PF16706.7, score=21.1]; Immunoglobulin V-set domain [PF07686.19, score=20.5]} {Mouse: ENSMUSG00000061462, Obscn, obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, [Score=50.1, Expect=9e-06]} {RNA1509_58583} {RNA1310_91007} {RNA815_37856}
2. MligTC455_42328 21 0.44 Mlig455_007412

Neo: -

Age: -

 3.911 1.000 0.972 - - 0.981 0.958 Mlig455_007412 {REF} {Length: 3904} {Pfam: Immunoglobulin domain [PF13895.8, score=50.0]; Immunoglobulin domain [PF13927.8, score=42.6]; Immunoglobulin I-set domain [PF07679.18, score=29.9]; Immunoglobulin domain [PF00047.27, score=27.2]; Izumo-like Immunoglobulin domain [PF16706.7, score=21.5]; F5/8 type C domain [PF00754.27, score=20.9]; Immunoglobulin V-set domain [PF07686.19, score=19.5]} {Mouse: ENSMUSG00000061462, Obscn, obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, [Score=52.0, Expect=4e-06]} {RNA1509_58583} {RNA1310_91007} {RNA815_37856}
3. MligTC455_42329 23 0.48 Mlig455_067682

Neo: -

Age: -

 3.862 0.966 0.955 - - 0.983 0.958 Mlig455_067682 {REF} {Length: 3699} {Pfam: Immunoglobulin domain [PF13895.8, score=59.5]; Immunoglobulin domain [PF13927.8, score=40.0]; Immunoglobulin I-set domain [PF07679.18, score=32.9]; Izumo-like Immunoglobulin domain [PF16706.7, score=29.3]; Immunoglobulin domain [PF00047.27, score=23.8]; Immunoglobulin V-set domain [PF07686.19, score=20.9]; F5/8 type C domain [PF00754.27, score=20.1]} {Mouse: ENSMUSG00000061462, Obscn, obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, [Score=58.5, Expect=6e-08]} {RNA1509_58583} {RNA1310_84845} {RNA815_37856}
4. MligTC455_42327 18 0.38 Mlig455_007524

Neo: -

Age: -

 3.826 1.000 0.947 - - 0.995 0.884 Mlig455_007524 {REF} {Length: 4524} {Pfam: Immunoglobulin domain [PF13895.8, score=69.8]; Immunoglobulin I-set domain [PF07679.18, score=40.3]; Immunoglobulin domain [PF13927.8, score=38.1]; Immunoglobulin domain [PF00047.27, score=27.4]; Izumo-like Immunoglobulin domain [PF16706.7, score=24.1]; Immunoglobulin V-set domain [PF07686.19, score=22.8]} {RNA1509_58583} {RNA1310_91007} {RNA815_37856}
5. MligTC455_41098 4257 88.69 Mlig455_034014, Mlig455_060394

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.581

Region-enriched R3: 3.643/0.00000
Region-enriched R2: 2.217/0.02283

 1.866 - - - - 0.961 0.905

Mlig455_034014 {REF} {Length: 923} {RNA1509_23466, RNA1509_37528, RNA1509_4891, RNA1509_58056} {RNA1310_47349.2, RNA1509_23466, RNA1509_37528, RNA1509_58056} {RNA1509_23466, RNA1509_37528, RNA1509_58056, RNA815_23195}

Mlig455_060394 {REF} {Length: 869} {RNA1509_4891} {RNA1310_47349.2, RNA1509_4891} {RNA1509_4891, RNA815_23195}
6. MligTC455_47152 7029 146.44 Mlig455_034047, Mlig455_034073

Neo: -

Age: Down-Up-Up

Region-specific R3: 6.221

Region-enriched R3: 5.965/0.00000

 WSCD2 1.863 - - - - 0.951 0.912

Mlig455_034047 {REF} {Length: 1396} {Pfam: WSC domain [PF01822.21, score=57.0]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=63.2, Expect=1e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=62.8, Expect=1e-10]} {RNA1509_26136, RNA1509_34383, RNA1509_46552, RNA1509_4725} {RNA1310_32158, RNA1509_26136, RNA1509_46552, RNA1509_4725} {RNA1509_26136, RNA1509_46552, RNA1509_4725, RNA815_15166}

Mlig455_034073 {REF} {Length: 1503} {Pfam: WSC domain [PF01822.21, score=57.0]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=63.2, Expect=1e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=62.8, Expect=1e-10]} {RNA1509_30886, RNA1509_34383} {RNA1310_32158, RNA1509_30886, RNA1509_34383} {RNA1509_30886, RNA1509_34383, RNA815_15166}
7. MligTC455_20538 4166 86.79 Mlig455_001229, Mlig455_034589

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.574

Region-enriched R3: 6.818/0.00000

 1.855 - - - - 0.959 0.896

Mlig455_001229 {REF} {Length: 2014} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [RH, Score=70.1, Expect=3e-13]} {RNA1509_1992} {RNA1310_13555} {RNA815_4975}

Mlig455_034589 {REF} {Length: 2090} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [RH, Score=70.1, Expect=3e-13]} {RNA1509_11649, RNA1509_1992} {RNA1310_13555, RNA1509_11649} {RNA1509_11649, RNA815_4975}
8. MligTC455_09207 2015 41.98 Mlig455_060514

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.527

Region-specific R3: 6.384

Region-enriched R3: 6.504/0.00000

 TNN 1.85 - - - - 0.968 0.882 Mlig455_060514 {REF} {Length: 1540} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=123.6]} {Human: ENSG00000120332, TNN, tenascin N, [Score=123, Expect=8e-30]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=126, Expect=5e-31]; ENSMUSG00000026938, Fcna, ficolin A, [Score=120, Expect=8e-31]} {Dmel: FBgn0051832, CG31832, [Score=97.4, Expect=3e-23]} {Celegans: WBGene00020516, T15B7.1, [Score=67.8, Expect=2e-12]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=93.2, Expect=2e-20]} {RNA1509_22120, RNA1509_5879} {RNA1310_25624.1, RNA1509_22120, RNA1509_5879} {RNA1509_22120, RNA1509_5879, RNA815_10978}
9. MligTC455_18395 39 0.8 Mlig455_053780

Neo: -

Age: -

 MECOM 1.841 - - - - 0.972 0.869 Mlig455_053780 {REF} {Length: 1146} {Pfam: Zinc-finger double domain [PF13465.8, score=63.0]; Zinc finger, C2H2 type [PF00096.28, score=48.8]; C2H2-type zinc finger [PF13894.8, score=33.6]; C2H2-type zinc-finger domain [PF13909.8, score=26.9]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=23.9]; GAGA factor [PF09237.13, score=18.9]} {Human: ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [Score=133, Expect=6e-34]; ENSG00000142611, PRDM16, PR/SET domain 16, [Score=132, Expect=8e-34]} {Mouse: ENSMUSG00000039410, Prdm16, PR domain containing 16, [Score=133, Expect=5e-34]; ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [Score=133, Expect=3e-34]} {Dmel: FBgn0032707, CG10348, [Score=132, Expect=3e-34]} {Celegans: WBGene00001207, egl-43, Egl-43, [RH, Score=97.8, Expect=3e-23]} {Smed: dd_Smed_v6_22685_0_1, dd_Smed_v6_22685_0_1, [Score=134, Expect=1e-36]} {RNA1310_48534} {RNA815_4264.1}
10. MligTC455_50465 62 1.29 Mlig455_021079

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 3.867/0.00195

 1.817 0.961 0.856 - - - - Mlig455_021079 {REF} {Length: 1927} {RNA1509_25746} {RNA1310_23886.1} {RNA815_8813.1}
11. MligTC455_17840 437 9.11 Mlig455_035513

Neo: -

Age: Up-Down-Up

Region-specific R3: 6.361

Region-enriched R3: 6.781/0.00000

 KREMEN1 1.799 - - - - 0.952 0.847 Mlig455_035513 {REF} {Length: 2316} {Pfam: WSC domain [PF01822.21, score=52.7]; F5/8 type C domain [PF00754.27, score=30.6]; Family of unknown function (DUF5470) [PF17564.4, score=25.2]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=49.7, Expect=1e-05]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=50.4, Expect=5e-06]} {Smed: dd_Smed_v6_2342_0_1, dd_Smed_v6_2342_0_1, [Score=53.1, Expect=2e-07]} {RNA1509_16751} {RNA1310_13951.2} {RNA815_6113.1}
12. MligTC455_13523 27 0.56 Mlig455_068497

Neo: -

Age: -

 SBK1 1.798 - - - - 0.985 0.813 Mlig455_068497 {REF} {Length: 1384} {Pfam: Protein kinase domain [PF00069.27, score=133.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=103.2]; Kinase-like [PF14531.8, score=18.7]} {Human: ENSG00000188322, SBK1, SH3 domain binding kinase 1, [Score=242, Expect=7e-76]} {Mouse: ENSMUSG00000042978, Sbk1, SH3-binding kinase 1, [Score=242, Expect=4e-76]} {Dmel: FBgn0034137, CG4945, [RH, Score=200, Expect=8e-59]} {Celegans: WBGene00009326, F32D8.1, [Score=109, Expect=6e-27]} {Smed: dd_Smed_v6_8041_0_1, dd_Smed_v6_8041_0_1, [Score=98.6, Expect=4e-23]} {RNA1310_104030}
13. MligTC455_53396 62 1.28 Mlig455_015104

Neo: -

Age: Down-Up-Down

Region-enriched R3: 5.872/0.01335

 1.779 - - - - 0.962 0.817 Mlig455_015104 {REF} {Length: 524} {RNA1310_47413} {RNA815_29456.2}
14. MligTC455_13265 61 1.26 Mlig455_015223

Neo: -

Age: -

 1.774 - - - - 0.960 0.814 Mlig455_015223 {REF} {Length: 631} {RNA1310_72558} {RNA815_28618}
15. MligTC455_36571 225 4.68 Mlig455_018019

Neo: -

Age: Up-Down-Down

Region-enriched R4: 2.466/0.03928

 1.699 - - - - 0.979 0.720 Mlig455_018019 {REF} {Length: 3541} {RNA1509_41400} {RNA1310_4515.1} {RNA815_3928}
16. MligTC455_10345 30 0.63 Mlig455_018653, Mlig455_018855

Neo: -

Age: -

 1.696 - - - - 0.951 0.745

Mlig455_018653 {REF} {Length: 1014}

Mlig455_018855 {REF} {Length: 1036}
17. MligTC455_46100 3 0.06 Mlig455_046242

Neo: -

Age: -

 0.987 - - - - 0.987 - Mlig455_046242 {REF} {Length: 959} {Pfam: RNase H [PF00075.26, score=49.6]} {RNA1509_30369} {RNA1310_1991} {RNA815_1648}
18. MligTC455_19833 61 1.28 Mlig455_014399

Neo: -

Age: -

 0.984 - - - - 0.984 - Mlig455_014399 {REF} {Length: 1151} {Pfam: dUTPase [PF00692.21, score=48.4]} {RNA1310_102290}
19. MligTC455_12182 20 0.41 Mlig455_040697

Neo: -

Age: -

 0.983 - - - - 0.983 - Mlig455_040697 {REF} {Length: 543} {NoTransDecoderORF}
20. MligTC455_30770 6 0.13 Mlig455_028957, Mlig455_068819

Neo: -

Age: Up-Down-Up

 0.982 - - - - 0.982 -

Mlig455_028957 {REF} {Length: 921} {Pfam: SAP domain [PF02037.29, score=37.1]} {RNA1310_34705}

Mlig455_068819 {REF} {Length: 3949} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=39.8]; Phage integrase family [PF00589.24, score=22.4]} {RNA1310_34705} {RNA815_30939}
21. MligTC455_27998 8 0.16 Mlig455_022132

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_022132 {REF} {Length: 1238} {NoTransDecoderORF}
22. MligTC455_51124 10 0.2 Mlig455_016114

Neo: -

Age: -

 CUBN 0.979 - - - - 0.979 - Mlig455_016114 {REF} {Length: 1307} {Pfam: CUB domain [PF00431.22, score=55.5]} {Human: ENSG00000107611, CUBN, cubilin, [Score=58.2, Expect=2e-09]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=53.5, Expect=7e-08]} {Dmel: FBgn0003719, tld, tolloid, [Score=45.8, Expect=1e-05]} {Smed: dd_Smed_v6_69474_0_1, dd_Smed_v6_69474_0_1, [Score=43.9, Expect=3e-06]} {RNA1310_66805}
23. MligTC455_57235 2 0.04 Mlig455_001388

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_001388 {REF} {Length: 416} {NoTransDecoderORF}
24. MligTC455_50868 12 0.25 Mlig455_022677

Neo: -

Age: -

 0.978 - - - - 0.978 - Mlig455_022677 {REF} {Length: 1648} {TRANSSPLICED} {RNA1509_11728} {RNA1310_41969} {RNA815_23102}
25. MligTC455_13666 6 0.12 Mlig455_037836, Mlig455_037935

Neo: -

Age: Down-Up-Down

 SAMD1 0.977 - - - - 0.977 -

Mlig455_037836 {REF} {Length: 2931} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=36.0]; SAM domain (Sterile alpha motif) [PF07647.19, score=30.2]; Sterile alpha motif (SAM)/Pointed domain [PF02198.18, score=18.5]} {Human: ENSG00000141858, SAMD1, sterile alpha motif domain containing 1, [Score=73.9, Expect=2e-13]} {Mouse: ENSMUSG00000079003, Samd1, sterile alpha motif domain containing 1, [Score=73.6, Expect=2e-13]} {Dmel: FBgn0024993, CG2662, [Score=65.9, Expect=3e-11]} {Smed: dd_Smed_v6_11245_0_1, dd_Smed_v6_11245_0_1, [Score=82.4, Expect=2e-16]} {RNA1310_24465} {RNA815_45357}

Mlig455_037935 {REF} {Length: 2883} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=36.1]; SAM domain (Sterile alpha motif) [PF07647.19, score=30.2]} {Human: ENSG00000141858, SAMD1, sterile alpha motif domain containing 1, [Score=74.7, Expect=9e-14]} {Mouse: ENSMUSG00000079003, Samd1, sterile alpha motif domain containing 1, [Score=74.3, Expect=9e-14]} {Dmel: FBgn0024993, CG2662, [Score=65.9, Expect=3e-11]} {Smed: dd_Smed_v6_11245_0_2, dd_Smed_v6_11245_0_2, [Score=83.6, Expect=7e-17]} {RNA1310_24465} {RNA815_45357}
26. MligTC455_55318 7 0.15 Mlig455_010970

Neo: -

Age: -

 ALX4 0.977 - - - - 0.977 - Mlig455_010970 {REF} {Length: 1044} {Pfam: Homeodomain [PF00046.31, score=44.7]} {Human: ENSG00000052850, ALX4, ALX homeobox 4, [Score=68.6, Expect=6e-13]; ENSG00000133937, GSC, goosecoid homeobox, [Score=66.6, Expect=9e-13]; ENSG00000063515, GSC2, goosecoid homeobox 2, [Score=66.6, Expect=5e-13]} {Mouse: ENSMUSG00000040310, Alx4, aristaless-like homeobox 4, [Score=68.2, Expect=4e-13]; ENSMUSG00000021095, Gsc, goosecoid homeobox, [Score=67.0, Expect=6e-13]; ENSMUSG00000014603, Alx3, aristaless-like homeobox 3, [Score=65.1, Expect=5e-12]} {Dmel: FBgn0010323, Gsc, Goosecoid, [Score=71.6, Expect=2e-14]} {Celegans: WBGene00022837, ceh-45, C. Elegans Homeobox, [Score=63.2, Expect=1e-12]} {Smed: dd_Smed_v6_16955_0_1, dd_Smed_v6_16955_0_1, [Score=64.3, Expect=4e-12]}
27. MligTC455_06788 28 0.59 Mlig455_003273, Mlig455_014182, Mlig455_037567, Mlig455_046981

Neo: -

Age: Down-Up-Down

Region-enriched R5: 5.138/0.00867

 0.975 - - - - 0.975 -

Mlig455_003273 {REF} {Length: 619} {RNA1509_23064} {RNA1310_9108} {RNA815_5569}

Mlig455_014182 {REF} {Length: 848} {RNA1509_23064} {RNA1310_9108} {RNA815_5569}

Mlig455_037567 {REF} {Length: 733} {RNA1509_23064} {RNA1310_9108} {RNA815_5569}

Mlig455_046981 {REF} {Length: 755} {RNA1509_23064} {RNA1310_9108} {RNA815_5569}
28. MligTC455_50389 19 0.39 Mlig455_059799

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_059799 {REF} {Length: 1159} {Pfam: LIM domain [PF00412.24, score=54.9]} {Dmel: FBgn0085354, CG34325, [Score=55.1, Expect=6e-09]} {RNA1310_54844} {RNA815_43129}
29. MligTC455_41854 80 1.67 Mlig455_034307, Mlig455_067305, Mlig455_067321

Neo: -

Age: -

 0.97 - - - - - 0.970

Mlig455_034307 {REF} {Length: 459} {RNA815_51696.1}

Mlig455_067305 {REF} {Length: 466} {RNA815_51696.1}

Mlig455_067321 {REF} {Length: 95} {TRANSSPLICED} {NoTransDecoderORF} {RNA815_51696.1}
30. MligTC455_48160 12 0.25 Mlig455_059561

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_059561 {REF} {Length: 1191} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=27.9]} {RNA1310_31078} {RNA815_45415}
31. MligTC455_07023 32 0.67 Mlig455_018609

Neo: -

Age: -

 TMEM243 0.968 - - - - 0.968 - Mlig455_018609 {REF} {Length: 1106} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF2678) [PF10856.10, score=53.8]} {Human: ENSG00000135185, TMEM243, transmembrane protein 243, [RH, Score=64.7, Expect=5e-13]} {Mouse: ENSMUSG00000079659, Tmem243, transmembrane protein 243, mitochondrial, [Score=49.3, Expect=1e-07]} {RNA1509_52894} {RNA1310_40265} {RNA815_19809}
32. MligTC455_13395 18 0.38 Mlig455_061750

Neo: -

Age: -

 QRFPR 0.968 - - - - 0.968 - Mlig455_061750 {REF} {Length: 1579} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=107.1]} {Human: ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=99.8, Expect=2e-22]} {Mouse: ENSMUSG00000035528, Npffr2, neuropeptide FF receptor 2, [Score=92.8, Expect=2e-20]} {Dmel: FBgn0050106, CCHa1-R, CCHamide-1 receptor, [Score=78.6, Expect=1e-15]} {Celegans: WBGene00021983, npr-5, NeuroPeptide Receptor family, [Score=77.4, Expect=2e-15]} {Smed: dd_Smed_v6_14520_0_1, dd_Smed_v6_14520_0_1, [Score=73.9, Expect=2e-14]} {RNA1310_103173} {RNA815_39338}
33. MligTC455_49030 12 0.24 Mlig455_028225

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.839

 SYT3 0.968 - - - - 0.968 - Mlig455_028225 {REF} {Length: 3004} {Pfam: C2 domain [PF00168.32, score=61.2]} {Human: ENSG00000213023, SYT3, synaptotagmin 3, [Score=75.9, Expect=2e-14]} {Mouse: ENSMUSG00000030731, Syt3, synaptotagmin III, [Score=74.7, Expect=4e-14]; ENSMUSG00000062542, Syt9, synaptotagmin IX, [Score=71.6, Expect=3e-13]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=59.3, Expect=2e-09]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=59.7, Expect=1e-09]} {Smed: dd_Smed_v6_25279_0_1, dd_Smed_v6_25279_0_1, [Score=87.8, Expect=2e-19]} {RNA1310_53959} {RNA815_36451}
34. MligTC455_11612 12 0.25 Mlig455_052732

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_052732 {REF} {Length: 296} {NoTransDecoderORF}
35. MligTC455_26478 450 9.37 Mlig455_023316

Neo: -

Age: Up-Down-Down

Region-enriched R3: 5.218/0.00065
Region-enriched R2: 4.422/0.03223

 VWF 0.964 - - - - 0.964 - Mlig455_023316 {REF} {Length: 11924} {Pfam: von Willebrand factor type D domain [PF00094.27, score=316.7]; C8 domain [PF08742.13, score=132.2]; Trypsin Inhibitor like cysteine rich domain [PF01826.19, score=97.3]; von Willebrand factor type C domain [PF00093.20, score=28.5]; Major Vault Protein repeat domain [PF01505.20, score=22.1]; EGF-like domain [PF07974.15, score=19.4]} {Human: ENSG00000110799, VWF, von Willebrand factor, [RH, Score=561, Expect=3e-161]; ENSG00000197558, SSPO, SCO-spondin, [RH, Score=553, Expect=4e-158]} {Mouse: ENSMUSG00000001930, Vwf, Von Willebrand factor, [RH, Score=584, Expect=6e-169]; ENSMUSG00000029797, Sspo, SCO-spondin, [RH, Score=555, Expect=8e-159]} {Dmel: FBgn0029167, Hml, Hemolectin, [RH, Score=513, Expect=3e-146]} {Celegans: WBGene00000168, apx-1, Anterior pharynx in excess protein 1, [Score=75.9, Expect=2e-13]} {Smed: dd_Smed_v6_17988_0_1, dd_Smed_v6_17988_0_1, [RH, Score=1132, Expect=0.0]} {RNA1509_12284, RNA1509_28666, RNA1509_743, RNA1509_7717} {RNA1310_76, RNA1509_12284, RNA1509_28666, RNA1509_7717} {RNA1509_12284, RNA1509_28666, RNA1509_7717, RNA815_53.1}
36. MligTC455_04850 6 0.12 Mlig455_050131

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_050131 {REF} {Length: 903} {NoTransDecoderORF}
37. MligTC455_30931 8 0.17 Mlig455_058745

Neo: -

Age: -

 TBCCD1 0.962 - - - - 0.962 - Mlig455_058745 {REF} {Length: 2416} {TRANSSPLICED} {Pfam: Tubulin binding cofactor C [PF07986.14, score=81.3]} {Human: ENSG00000113838, TBCCD1, TBCC domain containing 1, [RH, Score=244, Expect=3e-72]} {Mouse: ENSMUSG00000004462, Tbccd1, TBCC domain containing 1, [RH, Score=246, Expect=4e-73]} {Smed: dd_Smed_v6_12514_0_1, dd_Smed_v6_12514_0_1, [RH, Score=324, Expect=1e-102]} {RNA1509_44730} {RNA1310_4807.1} {RNA815_3591}
38. MligTC455_48520 46 0.96 Mlig455_004433

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_004433 {REF} {Length: 701} {RNA1310_56623} {RNA815_27009}
39. MligTC455_14034 25 0.52 Mlig455_001196

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_001196 {REF} {Length: 1906} {RNA1509_36146} {RNA1310_50710} {RNA815_46064}
40. MligTC455_19821 40 0.84 Mlig455_010217

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_010217 {REF} {Length: 1747} {NoTransDecoderORF} {RNA1310_66243}
41. MligTC455_25081 10 0.21 Mlig455_041573

Neo: -

Age: -

 TNC 0.953 - - - - 0.953 - Mlig455_041573 {REF} {Length: 6277} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=122.5]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=74.4]; WSC domain [PF01822.21, score=19.9]} {Human: ENSG00000041982, TNC, tenascin C, [Score=67.0, Expect=2e-10]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=66.6, Expect=1e-10]; ENSG00000160339, FCN2, ficolin 2, [Score=65.9, Expect=5e-11]; ENSG00000104760, FGL1, fibrinogen like 1, [Score=65.5, Expect=1e-10]; ENSG00000116147, TNR, tenascin R, [Score=63.9, Expect=1e-09]} {Mouse: ENSMUSG00000028364, Tnc, tenascin C, [Score=68.2, Expect=6e-11]; ENSMUSG00000031594, Fgl1, fibrinogen-like protein 1, [Score=68.2, Expect=9e-12]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=67.4, Expect=5e-11]} {Dmel: FBgn0050281, CG30281, [Score=83.2, Expect=5e-17]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=54.7, Expect=3e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=73.6, Expect=3e-13]} {RNA1310_53479} {RNA815_28131}
42. MligTC455_04509 308 6.42 Mlig455_015097, Mlig455_015215

Neo: -

Age: -

Region-enriched R3: 2.768/0.00001
Region-enriched R7: 2.553/0.00083

Regeneration-downregulated BL: -7.255

Regeneration-depleted BL: -7.255

 C1GALT1 0.951 - - - - 0.951 -

Mlig455_015097 {REF} {Length: 1363} {Pfam: Galactosyltransferase [PF01762.23, score=33.1]; Fringe-like [PF02434.18, score=32.5]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=162, Expect=2e-46]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=165, Expect=1e-47]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [Score=183, Expect=3e-54]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=183, Expect=3e-54]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=188, Expect=1e-56]} {RNA1509_52982} {RNA1310_22738.1} {RNA815_21441}

Mlig455_015215 {REF} {Length: 2494} {Pfam: Fringe-like [PF02434.18, score=59.2]; Galactosyltransferase [PF01762.23, score=57.8]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=175, Expect=3e-48]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=172, Expect=1e-47]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [Score=184, Expect=7e-52]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=183, Expect=2e-51]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=188, Expect=8e-54]} {RNA1509_52982} {RNA1310_22738.1} {RNA815_21441}
43. MligTC455_32032 70 1.46 Mlig455_017979

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_017979 {REF} {Length: 3320} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=59.1]} {RNA1509_44324} {RNA1310_37384} {RNA815_32175}
44. MligTC455_07250 20 0.42 Mlig455_045061

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_045061 {REF} {Length: 2075} {RNA1310_108250} {RNA815_9898}
45. MligTC455_19100 15 0.31 Mlig455_025252

Neo: -

Age: -

 DAXX 0.95 - - - - 0.950 - Mlig455_025252 {REF} {Length: 4813} {TRANSSPLICED} {Human: ENSG00000231617, DAXX, death domain associated protein, [Score=108, Expect=2e-23]; ENSG00000227046, DAXX, death domain associated protein, [Score=108, Expect=2e-23]; ENSG00000204209, DAXX, death domain associated protein, [Score=108, Expect=2e-23]; ENSG00000206206, DAXX, death domain associated protein, [Score=108, Expect=2e-23]; ENSG00000206279, DAXX, death domain associated protein, [Score=108, Expect=2e-23]} {Mouse: ENSMUSG00000002307, Daxx, Fas death domain-associated protein, [Score=113, Expect=2e-25]} {Dmel: FBgn0031820, Daxx, Daxx-like protein, [Score=80.1, Expect=7e-15]} {Smed: dd_Smed_v6_12059_0_6, dd_Smed_v6_12059_0_6, [RH, Score=113, Expect=5e-26]} {RNA1509_25153} {RNA1310_7064.1} {RNA815_18101}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA