TomoSeq data search

Data search

Results for MligTC455_19889

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19889

2061

42.94

Mlig455_009500

Neo: -

Age: Up-Down-Down

Region-enriched R4: 1.226/0.02420

GAPDH

Mlig455_009500 {REF} {Length: 1545} {TRANSSPLICED} {Pfam: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain [PF02800.22, score=234.0]; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain [PF00044.26, score=130.7]} {Human: ENSG00000111640, GAPDH, glyceraldehyde-3-phosphate dehydrogenase, [RH, Score=506, Expect=0.0]; ENSG00000105679, GAPDHS, glyceraldehyde-3-phosphate dehydrogenase, spermatogenic, [RH, Score=497, Expect=5e-177]} {Mouse: ENSMUSG00000057666, Gapdh, glyceraldehyde-3-phosphate dehydrogenase, [RH, Score=514, Expect=0.0]; ENSMUSG00000110469, Gm10358, predicted gene 10358, [RH, Score=512, Expect=0.0]; ENSMUSG00000097148, Gm3839, predicted pseudogene 3839, [RH, Score=511, Expect=0.0]} {Dmel: FBgn0001092, Gapdh2, Glyceraldehyde 3 phosphate dehydrogenase 2, [RH, Score=496, Expect=6e-178]} {Celegans: WBGene00001685, gpd-3, Glyceraldehyde-3-phosphate dehydrogenase 3, [RH, Score=507, Expect=0.0]} {Smed: dd_Smed_v6_78_0_1, dd_Smed_v6_78_0_1, [RH, Score=518, Expect=0.0]} {RNA1509_11046, RNA1509_11538, RNA1509_2151, RNA1509_40411, RNA1509_55377, RNA1509_58362, RNA1509_59045} {RNA1310_20591, RNA1509_11046, RNA1509_11538, RNA1509_2151, RNA1509_40411, RNA1509_55377, RNA1509_58362, RNA1509_59045} {RNA1509_11046, RNA1509_11538, RNA1509_2151, RNA1509_40411, RNA1509_55377, RNA1509_58362, RNA1509_59045, RNA815_8300.1}

Cumulative graph for MligTC455_19889

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.382	5.598	0.54774	1.00000
RegionR2	0.984	5.598	0.01295	0.11846
RegionR3	-0.333	5.598	0.36145	0.89673
RegionR4	1.226	5.598	0.00295	0.02420
RegionR5	-1.616	5.598	0.00003	0.00063
RegionR6	-0.427	5.598	0.25825	0.84552
RegionR7	-0.259	5.598	0.52152	1.00000
RegionR8	0.043	5.598	0.92615	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.977	5.598	0.04190	0.67581
RegenerationR2	-1.256	5.598	0.00411	0.09885
RegenerationR3	-0.621	5.598	0.17228	0.60764
RegenerationR4	-1.508	5.598	0.00160	0.04841
RegenerationR5	-0.277	5.598	0.55824	0.89011
RegenerationR6	-1.093	5.598	0.02146	0.18158
RegenerationBL	-1.02	5.598	0.03131	0.19803
RegenerationTP	-0.706	5.598	0.14511	0.56746

Genes with expression patterns similar to MligTC455_19889

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19889	2061	42.94	Mlig455_009500	Neo: - Age: Up-Down-Down Region-enriched R4: 1.226/0.02420	GAPDH	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_009500 {REF} {Length: 1545} {TRANSSPLICED} {Pfam: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain [PF02800.22, score=234.0]; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain [PF00044.26, score=130.7]} {Human: ENSG00000111640, GAPDH, glyceraldehyde-3-phosphate dehydrogenase, [RH, Score=506, Expect=0.0]; ENSG00000105679, GAPDHS, glyceraldehyde-3-phosphate dehydrogenase, spermatogenic, [RH, Score=497, Expect=5e-177]} {Mouse: ENSMUSG00000057666, Gapdh, glyceraldehyde-3-phosphate dehydrogenase, [RH, Score=514, Expect=0.0]; ENSMUSG00000110469, Gm10358, predicted gene 10358, [RH, Score=512, Expect=0.0]; ENSMUSG00000097148, Gm3839, predicted pseudogene 3839, [RH, Score=511, Expect=0.0]} {Dmel: FBgn0001092, Gapdh2, Glyceraldehyde 3 phosphate dehydrogenase 2, [RH, Score=496, Expect=6e-178]} {Celegans: WBGene00001685, gpd-3, Glyceraldehyde-3-phosphate dehydrogenase 3, [RH, Score=507, Expect=0.0]} {Smed: dd_Smed_v6_78_0_1, dd_Smed_v6_78_0_1, [RH, Score=518, Expect=0.0]} {RNA1509_11046, RNA1509_11538, RNA1509_2151, RNA1509_40411, RNA1509_55377, RNA1509_58362, RNA1509_59045} {RNA1310_20591, RNA1509_11046, RNA1509_11538, RNA1509_2151, RNA1509_40411, RNA1509_55377, RNA1509_58362, RNA1509_59045} {RNA1509_11046, RNA1509_11538, RNA1509_2151, RNA1509_40411, RNA1509_55377, RNA1509_58362, RNA1509_59045, RNA815_8300.1}
2.	MligTC455_19890	2301	47.93	Mlig455_070929	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.310 Region-enriched R2: 1.219/0.03494	GAPDHS	4.829	-	0.934	0.938	0.969	0.990	0.998	Mlig455_070929 {REF} {Length: 1437} {TRANSSPLICED} {Pfam: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain [PF02800.22, score=143.6]; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain [PF00044.26, score=90.4]} {Human: ENSG00000105679, GAPDHS, glyceraldehyde-3-phosphate dehydrogenase, spermatogenic, [Score=378, Expect=1e-130]; ENSG00000111640, GAPDH, glyceraldehyde-3-phosphate dehydrogenase, [Score=377, Expect=2e-131]} {Mouse: ENSMUSG00000057666, Gapdh, glyceraldehyde-3-phosphate dehydrogenase, [Score=384, Expect=3e-134]; ENSMUSG00000110469, Gm10358, predicted gene 10358, [Score=383, Expect=4e-134]; ENSMUSG00000097148, Gm3839, predicted pseudogene 3839, [Score=383, Expect=6e-134]; ENSMUSG00000061099, Gapdhs, glyceraldehyde-3-phosphate dehydrogenase, spermatogenic, [Score=367, Expect=2e-126]} {Dmel: FBgn0001092, Gapdh2, Glyceraldehyde 3 phosphate dehydrogenase 2, [Score=377, Expect=1e-131]} {Celegans: WBGene00001685, gpd-3, Glyceraldehyde-3-phosphate dehydrogenase 3, [Score=376, Expect=3e-131]} {Smed: dd_Smed_v6_78_0_1, dd_Smed_v6_78_0_1, [Score=407, Expect=9e-144]} {RNA1509_14226} {RNA1310_20591} {RNA815_8300.1}
3.	MligTC455_53827	41	0.85	Mlig455_057728	Neo: - Age: - Region-enriched R2: 6.363/0.00033 Region-enriched R4: 3.785/0.00394		2.522	-	0.830	-	-	0.956	0.736	Mlig455_057728 {REF} {Length: 1074} {RNA1310_41119} {RNA815_15825}
4.	MligTC455_22037	397	8.28	Mlig455_013950, Mlig455_039339	Neo: Germline Age: - Region-enriched R4: 2.424/0.00629	DRD2	2.498	-	-	-	0.762	0.978	0.758	Mlig455_013950 {REF} {Length: 2458} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=247.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=49.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=33.6]; Olfactory receptor [PF13853.8, score=24.0]} {Human: ENSG00000149295, DRD2, dopamine receptor D2, [Score=242, Expect=9e-74]} {Mouse: ENSMUSG00000032259, Drd2, dopamine receptor D2, [Score=235, Expect=2e-71]; ENSMUSG00000022705, Drd3, dopamine receptor D3, [Score=231, Expect=2e-69]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [Score=330, Expect=6e-104]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=199, Expect=1e-57]} {Smed: dd_Smed_v6_27884_0_1, dd_Smed_v6_27884_0_1, [Score=281, Expect=9e-89]} {RNA1509_30039} {RNA1310_24944} {RNA815_15995} Mlig455_039339 {REF} {Length: 4177} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=70.7]} {Human: ENSG00000149295, DRD2, dopamine receptor D2, [Score=100, Expect=5e-25]; ENSG00000179546, HTR1D, 5-hydroxytryptamine receptor 1D, [Score=96.7, Expect=1e-23]} {Mouse: ENSMUSG00000032259, Drd2, dopamine receptor D2, [Score=99.8, Expect=1e-24]; ENSMUSG00000070687, Htr1d, 5-hydroxytryptamine (serotonin) receptor 1D, [Score=97.4, Expect=4e-24]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [Score=116, Expect=1e-30]} {Celegans: WBGene00017157, tyra-2, Tyramine receptor tyra-2, [Score=88.2, Expect=3e-21]} {Smed: dd_Smed_v6_36844_0_1, dd_Smed_v6_36844_0_1, [Score=109, Expect=2e-29]} {RNA1509_30039} {RNA1310_24944} {RNA815_15995}
5.	MligTC455_49862	26	0.54	Mlig455_019435	Neo: - Age: -	SHOX2	1.789	-	-	-	0.833	0.956	-	Mlig455_019435 {REF} {Length: 904} {Pfam: Homeodomain [PF00046.31, score=84.8]; Homeobox KN domain [PF05920.13, score=23.6]} {Human: ENSG00000168779, SHOX2, short stature homeobox 2, [Score=89.0, Expect=4e-22]; ENSG00000185960, SHOX, short stature homeobox, [Score=87.0, Expect=5e-21]} {Mouse: ENSMUSG00000027833, Shox2, short stature homeobox 2, [Score=89.0, Expect=3e-22]} {Dmel: FBgn0085396, CG34367, [Score=89.7, Expect=9e-22]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [Score=83.6, Expect=5e-20]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [Score=86.3, Expect=2e-20]} {RNA1310_51707} {RNA815_41055}
6.	MligTC455_18987	99	2.07	Mlig455_049864	Neo: - Age: Down-Up-Down	SYN1	1.747	-	-	-	0.795	0.952	-	Mlig455_049864 {REF} {Length: 2522} {Pfam: Synapsin, ATP binding domain [PF02750.16, score=235.1]; Synapsin, N-terminal domain [PF02078.18, score=137.6]} {Human: ENSG00000008056, SYN1, synapsin I, [RH, Score=323, Expect=4e-102]; ENSG00000185666, SYN3, synapsin III, [RH, Score=322, Expect=1e-102]; ENSG00000157152, SYN2, synapsin II, [RH, Score=322, Expect=1e-102]} {Mouse: ENSMUSG00000059602, Syn3, synapsin III, [RH, Score=328, Expect=4e-105]; ENSMUSG00000037217, Syn1, synapsin I, [RH, Score=325, Expect=6e-103]; ENSMUSG00000009394, Syn2, synapsin II, [RH, Score=322, Expect=4e-104]} {Dmel: FBgn0004575, Syn, Synapsin, [RH, Score=322, Expect=1e-98]} {Celegans: WBGene00004913, snn-1, SyNapsiN; Synapsin, [Score=164, Expect=2e-44]} {Smed: dd_Smed_v6_3135_0_1, dd_Smed_v6_3135_0_1, [RH, Score=390, Expect=4e-129]} {RNA1509_58931} {RNA1310_22468.1} {RNA815_2386}
7.	MligTC455_12085	11	0.22	Mlig455_058618	Neo: - Age: -	NPFFR2	1.74	-	-	-	0.784	0.956	-	Mlig455_058618 {REF} {Length: 1772} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=137.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=22.1]; Olfactory receptor [PF13853.8, score=20.7]} {Human: ENSG00000056291, NPFFR2, neuropeptide FF receptor 2, [Score=129, Expect=6e-32]} {Mouse: ENSMUSG00000028004, Npy2r, neuropeptide Y receptor Y2, [Score=127, Expect=5e-32]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=169, Expect=1e-46]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=163, Expect=2e-45]} {Smed: dd_Smed_v6_16725_0_1, dd_Smed_v6_16725_0_1, [Score=248, Expect=3e-77]}
8.	MligTC455_32588	16	0.33	Mlig455_047656	Neo: - Age: Up-Down-Down		0.966	-	-	-	-	0.966	-	Mlig455_047656 {REF} {Length: 2936} {RNA1509_33890, RNA1509_50311} {RNA1310_1521.1, RNA1509_33890} {RNA1509_33890, RNA815_920.1}
9.	MligTC455_23547	43	0.89	Mlig455_025198	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_025198 {REF} {Length: 1912} {RNA1310_62305} {RNA815_43403}
10.	MligTC455_02658	23	0.48	Mlig455_044399, Mlig455_044436	Neo: - Age: - Region-enriched R4: 2.992/0.01385		0.956	-	-	-	-	0.956	-	Mlig455_044399 {REF} {Length: 1127} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_67960} Mlig455_044436 {REF} {Length: 429} {NoTransDecoderORF} {RNA1310_103288}
11.	MligTC455_05879	15	0.32	Mlig455_063605	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_063605 {REF} {Length: 563} {NoTransDecoderORF} {RNA1509_52081} {RNA1310_66924} {RNA815_45160}
12.	MligTC455_27778	30	0.62	Mlig455_019428	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_019428 {REF} {Length: 3355} {RNA1509_17564} {RNA1310_10601.3} {RNA815_24292}
13.	MligTC455_13450	29	0.6	Mlig455_067206	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_067206 {REF} {Length: 4119} {NoTransDecoderORF} {RNA1509_56630} {RNA1310_26826} {RNA815_17301.1}
14.	MligTC455_34134	80	1.67	Mlig455_047823, Mlig455_047895	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.597 Region-enriched R7: 4.103/0.00596		0.954	-	-	-	-	0.954	-	Mlig455_047823 {REF} {Length: 4070} {RNA1509_48445} {RNA1310_2447} {RNA815_20342} Mlig455_047895 {REF} {Length: 3034} {RNA1509_48445} {RNA1310_2447} {RNA815_20342}
15.	MligTC455_00401	18	0.37	Mlig455_066572	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_066572 {REF} {Length: 123} {NoTransDecoderORF} {RNA1310_85631}
16.	MligTC455_43621	222	4.63	Mlig455_025703	Neo: - Age: - Region-enriched R4: 4.147/0.00000		0.95	-	-	-	-	0.950	-	Mlig455_025703 {REF} {Length: 2480} {RNA1509_50338} {RNA1310_25031} {RNA815_24211}
17.	MligTC455_48063	63	1.31	Mlig455_046268	Neo: - Age: - Region-enriched R2: 5.256/0.00170		0.95	-	-	-	-	0.950	-	Mlig455_046268 {REF} {Length: 749} {RNA1310_88363} {RNA815_47885}

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