Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_32588 | 16 | 0.33 | Mlig455_047656 | Neo: - Age: Up-Down-Down |
Mlig455_047656 {REF} {Length: 2936} {RNA1509_33890, RNA1509_50311} {RNA1310_1521.1, RNA1509_33890} {RNA1509_33890, RNA815_920.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -2.601 | 0.784 | 0.99996 | 1.00000 | |
RegionR2 | 5.295 | 0.784 | 0.99958 | 1.00000 | |
RegionR3 | 0.78 | 0.784 | 0.99997 | 1.00000 | |
RegionR4 | -2.637 | 0.784 | 0.99984 | 1.00000 | |
RegionR5 | 0.413 | 0.784 | 0.99966 | 1.00000 | |
RegionR6 | -0.848 | 0.784 | 0.99991 | 1.00000 | |
RegionR7 | -0.186 | 0.784 | 0.99992 | 1.00000 | |
RegionR8 | -0.216 | 0.784 | 0.99993 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -0.094 | 0.784 | 0.99996 | 1.00000 | |
RegenerationR2 | -1.867 | 0.784 | 0.00341 | 0.08948 | |
RegenerationR3 | 1.2 | 0.784 | 0.99992 | 1.00000 | |
RegenerationR4 | 1.733 | 0.784 | 0.99962 | 1.00000 | |
RegenerationR5 | -2.591 | 0.784 | 0.99978 | 1.00000 | |
RegenerationR6 | 0.292 | 0.784 | 0.99967 | 1.00000 | |
RegenerationBL | -2.089 | 0.784 | 0.99995 | 1.00000 | |
RegenerationTP | -1.7 | 0.784 | 0.99995 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_32588 | 16 | 0.33 | Mlig455_047656 | Neo: - Age: Up-Down-Down |
1 | - | - | - | - | 1.000 | - | Mlig455_047656 {REF} {Length: 2936} {RNA1509_33890, RNA1509_50311} {RNA1310_1521.1, RNA1509_33890} {RNA1509_33890, RNA815_920.1} | |
2. | MligTC455_22037 | 397 | 8.28 | Mlig455_013950, Mlig455_039339 | Neo: Germline Age: - Region-enriched R4: 2.424/0.00629 |
DRD2 | 0.984 | - | - | - | - | 0.984 | - | Mlig455_013950 {REF} {Length: 2458} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=247.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=49.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=33.6]; Olfactory receptor [PF13853.8, score=24.0]} {Human: ENSG00000149295, DRD2, dopamine receptor D2, [Score=242, Expect=9e-74]} {Mouse: ENSMUSG00000032259, Drd2, dopamine receptor D2, [Score=235, Expect=2e-71]; ENSMUSG00000022705, Drd3, dopamine receptor D3, [Score=231, Expect=2e-69]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [Score=330, Expect=6e-104]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=199, Expect=1e-57]} {Smed: dd_Smed_v6_27884_0_1, dd_Smed_v6_27884_0_1, [Score=281, Expect=9e-89]} {RNA1509_30039} {RNA1310_24944} {RNA815_15995} Mlig455_039339 {REF} {Length: 4177} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=70.7]} {Human: ENSG00000149295, DRD2, dopamine receptor D2, [Score=100, Expect=5e-25]; ENSG00000179546, HTR1D, 5-hydroxytryptamine receptor 1D, [Score=96.7, Expect=1e-23]} {Mouse: ENSMUSG00000032259, Drd2, dopamine receptor D2, [Score=99.8, Expect=1e-24]; ENSMUSG00000070687, Htr1d, 5-hydroxytryptamine (serotonin) receptor 1D, [Score=97.4, Expect=4e-24]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [Score=116, Expect=1e-30]} {Celegans: WBGene00017157, tyra-2, Tyramine receptor tyra-2, [Score=88.2, Expect=3e-21]} {Smed: dd_Smed_v6_36844_0_1, dd_Smed_v6_36844_0_1, [Score=109, Expect=2e-29]} {RNA1509_30039} {RNA1310_24944} {RNA815_15995} |
3. | MligTC455_22668 | 41 | 0.86 | Mlig455_034247, Mlig455_067284 | Neo: - Age: - |
0.972 | - | - | - | - | 0.972 | - | Mlig455_034247 {REF} {Length: 2159} {RNA1509_55358} {RNA1310_19226} {RNA815_1882} Mlig455_067284 {REF} {Length: 3374} {RNA1509_55358} {RNA1310_19226} {RNA815_1882} |
|
4. | MligTC455_43389 | 18 | 0.38 | Mlig455_019091 | Neo: - Age: - |
PRKAR2A | 0.968 | - | - | - | - | 0.968 | - | Mlig455_019091 {REF} {Length: 2410} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=122.4]; Regulatory subunit of type II PKA R-subunit [PF02197.19, score=40.5]} {Human: ENSG00000114302, PRKAR2A, protein kinase cAMP-dependent type II regulatory subunit alpha, [Score=305, Expect=2e-100]; ENSG00000005249, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=297, Expect=5e-97]; ENSG00000284096, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=297, Expect=5e-97]} {Mouse: ENSMUSG00000032601, Prkar2a, protein kinase, cAMP dependent regulatory, type II alpha, [Score=313, Expect=9e-104]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=335, Expect=1e-112]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [Score=219, Expect=2e-68]} {Smed: dd_Smed_v6_4188_0_1, dd_Smed_v6_4188_0_1, [Score=335, Expect=6e-113]} {RNA1509_34470} {RNA1310_27777} {RNA815_5628} |
5. | MligTC455_19889 | 2061 | 42.94 | Mlig455_009500 | Neo: - Age: Up-Down-Down Region-enriched R4: 1.226/0.02420 |
GAPDH | 0.966 | - | - | - | - | 0.966 | - | Mlig455_009500 {REF} {Length: 1545} {TRANSSPLICED} {Pfam: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain [PF02800.22, score=234.0]; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain [PF00044.26, score=130.7]} {Human: ENSG00000111640, GAPDH, glyceraldehyde-3-phosphate dehydrogenase, [RH, Score=506, Expect=0.0]; ENSG00000105679, GAPDHS, glyceraldehyde-3-phosphate dehydrogenase, spermatogenic, [RH, Score=497, Expect=5e-177]} {Mouse: ENSMUSG00000057666, Gapdh, glyceraldehyde-3-phosphate dehydrogenase, [RH, Score=514, Expect=0.0]; ENSMUSG00000110469, Gm10358, predicted gene 10358, [RH, Score=512, Expect=0.0]; ENSMUSG00000097148, Gm3839, predicted pseudogene 3839, [RH, Score=511, Expect=0.0]} {Dmel: FBgn0001092, Gapdh2, Glyceraldehyde 3 phosphate dehydrogenase 2, [RH, Score=496, Expect=6e-178]} {Celegans: WBGene00001685, gpd-3, Glyceraldehyde-3-phosphate dehydrogenase 3, [RH, Score=507, Expect=0.0]} {Smed: dd_Smed_v6_78_0_1, dd_Smed_v6_78_0_1, [RH, Score=518, Expect=0.0]} {RNA1509_11046, RNA1509_11538, RNA1509_2151, RNA1509_40411, RNA1509_55377, RNA1509_58362, RNA1509_59045} {RNA1310_20591, RNA1509_11046, RNA1509_11538, RNA1509_2151, RNA1509_40411, RNA1509_55377, RNA1509_58362, RNA1509_59045} {RNA1509_11046, RNA1509_11538, RNA1509_2151, RNA1509_40411, RNA1509_55377, RNA1509_58362, RNA1509_59045, RNA815_8300.1} |
6. | MligTC455_40997 | 96 | 2 | Mlig455_001296 | Neo: - Age: - |
0.965 | - | - | - | - | 0.965 | - | Mlig455_001296 {REF} {Length: 2152} {Smed: dd_Smed_v6_29877_0_1, dd_Smed_v6_29877_0_1, [Score=89.0, Expect=3e-19]} {RNA1310_30591} {RNA815_40353} | |
7. | MligTC455_53466 | 67 | 1.39 | Mlig455_070695 | Neo: - Age: Up-Down-Down |
0.964 | - | - | - | - | 0.964 | - | Mlig455_070695 {REF} {Length: 2622} {Pfam: PDZ domain [PF00595.26, score=27.1]} {RNA1310_42258} {RNA815_27727} | |
8. | MligTC455_50017 | 90 | 1.87 | Mlig455_001478 | Neo: - Age: - Region-enriched R7: 3.044/0.02490 |
PLEKHG5 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_001478 {REF} {Length: 2809} {Pfam: RhoGEF domain [PF00621.22, score=86.5]} {Human: ENSG00000171680, PLEKHG5, pleckstrin homology and RhoGEF domain containing G5, [RH, Score=192, Expect=1e-51]} {Mouse: ENSMUSG00000039713, Plekhg5, pleckstrin homology domain containing, family G (with RhoGef domain) member 5, [Score=187, Expect=3e-50]} {Dmel: FBgn0261556, CG42674, [Score=149, Expect=1e-37]} {Celegans: WBGene00006476, rhgf-2, RHGF-2; RHo Guanine nucleotide exchange Factor, [RH, Score=125, Expect=3e-30]} {Smed: dd_Smed_v6_10072_0_1, dd_Smed_v6_10072_0_1, [RH, Score=167, Expect=2e-44]} {RNA1509_28263} {RNA1310_7368.1} {RNA815_16841} |
9. | MligTC455_20200 | 47 | 0.97 | Mlig455_021962 | Neo: - Age: - |
KCNMA1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_021962 {REF} {Length: 3749} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=76.1]; Ion channel [PF07885.18, score=61.3]; Ion transport protein [PF00520.33, score=34.6]; Ligand-gated ion channel [PF00060.28, score=23.9]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=634, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=628, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=449, Expect=8e-139]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=444, Expect=2e-137]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=610, Expect=0.0]} {RNA1310_43306.1} {RNA815_38585} |
10. | MligTC455_24335 | 62 | 1.29 | Mlig455_006542 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_006542 {REF} {Length: 3028} {NoTransDecoderORF} {RNA1310_45624} | |
11. | MligTC455_27535 | 13 | 0.27 | Mlig455_048809 | Neo: - |
PPP1R16B | 0.956 | - | - | - | - | 0.956 | - | Mlig455_048809 {REF} {Length: 2464} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.6]; Ankyrin repeat [PF00023.32, score=86.5]; Ankyrin repeats (many copies) [PF13637.8, score=86.4]; Ankyrin repeats (many copies) [PF13857.8, score=75.5]; Ankyrin repeat [PF13606.8, score=75.2]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=286, Expect=1e-88]} {Mouse: ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [Score=280, Expect=9e-87]; ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [Score=278, Expect=2e-86]} {Dmel: FBgn0036801, MYPT-75D, [Score=291, Expect=2e-90]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=228, Expect=7e-68]} {Smed: dd_Smed_v6_5941_0_2, dd_Smed_v6_5941_0_2, [Score=311, Expect=4e-99]} {RNA1310_118235} |
12. | MligTC455_37203 | 15 | 0.3 | Mlig455_016211 | Neo: - Age: - |
TRAF2 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_016211 {REF} {Length: 3900} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=30.7]} {Human: ENSG00000127191, TRAF2, TNF receptor associated factor 2, [Score=58.5, Expect=6e-09]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=59.3, Expect=3e-09]} {Smed: dd_Smed_v6_17551_0_2, dd_Smed_v6_17551_0_2, [Score=50.8, Expect=5e-07]} {RNA1509_7329} {RNA1310_29315} {RNA815_5375} |
13. | MligTC455_49862 | 26 | 0.54 | Mlig455_019435 | Neo: - Age: - |
SHOX2 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_019435 {REF} {Length: 904} {Pfam: Homeodomain [PF00046.31, score=84.8]; Homeobox KN domain [PF05920.13, score=23.6]} {Human: ENSG00000168779, SHOX2, short stature homeobox 2, [Score=89.0, Expect=4e-22]; ENSG00000185960, SHOX, short stature homeobox, [Score=87.0, Expect=5e-21]} {Mouse: ENSMUSG00000027833, Shox2, short stature homeobox 2, [Score=89.0, Expect=3e-22]} {Dmel: FBgn0085396, CG34367, [Score=89.7, Expect=9e-22]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [Score=83.6, Expect=5e-20]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [Score=86.3, Expect=2e-20]} {RNA1310_51707} {RNA815_41055} |
14. | MligTC455_01844 | 19 | 0.39 | Mlig455_018022 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_018022 {REF} {Length: 633} {Pfam: Protein of unknown function (DUF445) [PF04286.14, score=28.6]; EcsC protein family [PF12787.9, score=22.1]; Spore germination protein GerPC [PF10737.11, score=21.1]; Protein export membrane protein [PF02355.18, score=19.8]} {Mouse: ENSMUSG00000046056, Sbsn, suprabasin, [Score=53.1, Expect=4e-08]} {RNA1509_60122} {RNA1310_51739} {RNA815_33980} | |
15. | MligTC455_11962 | 161 | 3.36 | Mlig455_007597, Mlig455_007598, Mlig455_020829, Mlig455_020936 | Neo: - Age: - |
FBXL20 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_007597 {REF} {Length: 3041} {TRANSSPLICED} {RNA1509_29618} {RNA1310_41902} {RNA815_27627} Mlig455_007598 {REF} {Length: 1775} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=50.8]; F-box domain [PF00646.35, score=37.9]} {Human: ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=56.2, Expect=5e-08]; ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=54.3, Expect=2e-07]} {Mouse: ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=62.4, Expect=7e-11]} {Dmel: FBgn0033639, CG9003, [Score=48.9, Expect=6e-06]} {RNA1509_13719} {RNA1310_41902} {RNA815_27627} Mlig455_020829 {REF} {Length: 1938} {RNA1509_24145} {RNA1310_41902} {RNA815_27627} Mlig455_020936 {REF} {Length: 2152} {TRANSSPLICED} {RNA1509_24145} {RNA1310_41902} {RNA815_27627} |
16. | MligTC455_53827 | 41 | 0.85 | Mlig455_057728 | Neo: - Age: - Region-enriched R2: 6.363/0.00033 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_057728 {REF} {Length: 1074} {RNA1310_41119} {RNA815_15825} | |
17. | MligTC455_32613 | 115 | 2.4 | Mlig455_019212 | Neo: - Age: logFC(26M/2M)=-0.399 |
STAC | 0.951 | - | - | - | - | 0.951 | - | Mlig455_019212 {REF} {Length: 3658} {Pfam: Variant SH3 domain [PF14604.8, score=37.9]; SH3 domain [PF00018.30, score=37.8]; Variant SH3 domain [PF07653.19, score=22.2]} {Human: ENSG00000144681, STAC, SH3 and cysteine rich domain, [Score=64.3, Expect=3e-10]; ENSG00000141750, STAC2, SH3 and cysteine rich domain 2, [Score=63.2, Expect=1e-09]} {Mouse: ENSMUSG00000032502, Stac, src homology three (SH3) and cysteine rich domain, [Score=67.0, Expect=3e-11]} {Dmel: FBgn0263980, CG43729, [RH, Score=97.1, Expect=1e-20]} {Celegans: WBGene00006791, unc-57, Endophilin-A homolog, [Score=49.3, Expect=4e-07]} {Smed: dd_Smed_v6_14652_0_1, dd_Smed_v6_14652_0_1, [RH, Score=185, Expect=2e-48]} {RNA1509_45601} {RNA1310_13004, RNA1509_45601} {RNA1509_45601, RNA815_25263} |
18. | MligTC455_12674 | 5 | 0.1 | Mlig455_008612 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_008612 {REF} {Length: 1724} {NoTransDecoderORF} {RNA1310_73363} {RNA815_43965} | |
19. | MligTC455_29620 | 214 | 4.45 | Mlig455_046746, Mlig455_046767, Mlig455_069972 | Neo: - Age: Up-Down-Up |
EPHA1, KSR1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_046746 {REF} {Length: 3906} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=110.5]; Protein kinase domain [PF00069.27, score=65.0]; Kinase-like [PF14531.8, score=20.1]} {Human: ENSG00000141068, KSR1, kinase suppressor of ras 1, [Score=126, Expect=3e-29]; ENSG00000171435, KSR2, kinase suppressor of ras 2, [Score=124, Expect=1e-28]} {Mouse: ENSMUSG00000018334, Ksr1, kinase suppressor of ras 1, [Score=130, Expect=1e-30]; ENSMUSG00000061578, Ksr2, kinase suppressor of ras 2, [Score=124, Expect=1e-28]} {Dmel: FBgn0015402, ksr, kinase suppressor of ras, [Score=151, Expect=2e-37]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=129, Expect=1e-30]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [RH, Score=331, Expect=1e-102]} {RNA1509_38394} {RNA1310_3636} {RNA815_15015.1} Mlig455_046767 {REF} {Length: 3979} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=110.5]; Protein kinase domain [PF00069.27, score=65.0]; Kinase-like [PF14531.8, score=20.1]} {Human: ENSG00000141068, KSR1, kinase suppressor of ras 1, [Score=125, Expect=4e-29]; ENSG00000171435, KSR2, kinase suppressor of ras 2, [Score=124, Expect=1e-28]} {Mouse: ENSMUSG00000018334, Ksr1, kinase suppressor of ras 1, [Score=130, Expect=1e-30]; ENSMUSG00000061578, Ksr2, kinase suppressor of ras 2, [Score=124, Expect=1e-28]} {Dmel: FBgn0015402, ksr, kinase suppressor of ras, [Score=152, Expect=2e-37]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=129, Expect=1e-30]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [RH, Score=329, Expect=5e-102]} {RNA1509_38394} {RNA1310_3636} {RNA815_15015.1} Mlig455_069972 {REF} {Length: 1901} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=60.7]; Protein kinase domain [PF00069.27, score=33.2]} {Human: ENSG00000146904, EPHA1, EPH receptor A1, [Score=50.8, Expect=1e-07]; ENSG00000284816, EPHA1, EPH receptor A1, [Score=50.8, Expect=1e-07]; ENSG00000120899, PTK2B, protein tyrosine kinase 2 beta, [Score=50.1, Expect=3e-07]; ENSG00000047936, ROS1, ROS proto-oncogene 1, receptor tyrosine kinase, [Score=48.9, Expect=7e-07]; ENSG00000140443, IGF1R, insulin like growth factor 1 receptor, [Score=48.5, Expect=1e-06]} {Mouse: ENSMUSG00000029859, Epha1, Eph receptor A1, [Score=51.6, Expect=5e-08]; ENSMUSG00000003534, Ddr1, discoidin domain receptor family, member 1, [Score=50.8, Expect=1e-07]; ENSMUSG00000014361, Mertk, c-mer proto-oncogene tyrosine kinase, [Score=50.8, Expect=1e-07]; ENSMUSG00000028876, Epha10, Eph receptor A10, [Score=49.7, Expect=2e-07]; ENSMUSG00000059456, Ptk2b, PTK2 protein tyrosine kinase 2 beta, [Score=49.3, Expect=3e-07]} {Dmel: FBgn0003366, sev, sevenless, [Score=52.8, Expect=2e-08]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=53.5, Expect=6e-09]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [Score=125, Expect=5e-34]} {RNA1509_38394} {RNA1310_34788} {RNA815_31369} |
20. | MligTC455_37026 | 109 | 2.28 | Mlig455_029463 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_029463 {REF} {Length: 788} {RNA1310_43520} {RNA815_2407} |