Data search
Results for MligTC455_19904
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19904 | 276 | 5.75 | Mlig455_041003 | Neo: - Age: - |
CLIP1 | Mlig455_041003 {REF} {Length: 3725} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=148.6]; CLIP1 zinc knuckle [PF16641.7, score=54.0]; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=25.9]; Uso1 / p115 like vesicle tethering protein, C terminal region [PF04871.15, score=21.6]; Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=20.1]; Vacuolar sorting 38 and autophagy-related subunit 14 [PF10186.11, score=19.0]; PDZ domain of MCC-2 bdg protein for Usher syndrome [PF10506.11, score=18.8]} {Human: ENSG00000130779, CLIP1, CAP-Gly domain containing linker protein 1, [RH, Score=226, Expect=2e-61]; ENSG00000106665, CLIP2, CAP-Gly domain containing linker protein 2, [RH, Score=215, Expect=6e-58]} {Mouse: ENSMUSG00000049550, Clip1, CAP-GLY domain containing linker protein 1, [RH, Score=221, Expect=6e-60]; ENSMUSG00000063146, Clip2, CAP-GLY domain containing linker protein 2, [RH, Score=212, Expect=3e-57]} {Dmel: FBgn0020503, CLIP-190, Cytoplasmic linker protein 190, [RH, Score=216, Expect=2e-58]} {Celegans: WBGene00001017, dnc-1, DyNactin Complex component, [Score=72.8, Expect=8e-13]} {Smed: dd_Smed_v6_6651_0_1, dd_Smed_v6_6651_0_1, [Score=191, Expect=1e-50]} {RNA1509_55044, RNA1509_6017} {RNA1310_1622, RNA1509_55044} {RNA1509_55044, RNA815_1338} |
Cumulative graph for MligTC455_19904
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.018 | 3.005 | 0.28738 | 0.93926 | |
| RegionR2 | 1.078 | 3.005 | 0.29274 | 0.68107 | |
| RegionR3 | -0.178 | 3.005 | 0.90402 | 1.00000 | |
| RegionR4 | 0.9 | 3.005 | 0.36176 | 0.68474 | |
| RegionR5 | 0.758 | 3.005 | 0.38272 | 0.73761 | |
| RegionR6 | 1.046 | 3.005 | 0.24035 | 0.82539 | |
| RegionR7 | -0.113 | 3.005 | 0.89422 | 1.00000 | |
| RegionR8 | 1.528 | 3.005 | 0.22078 | 0.82839 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.878 | 3.005 | 0.10038 | 0.81739 | |
| RegenerationR2 | 1.365 | 3.005 | 0.00854 | 0.14782 | |
| RegenerationR3 | 1.724 | 3.005 | 0.01078 | 0.19000 | |
| RegenerationR4 | 0.656 | 3.005 | 0.30710 | 0.74836 | |
| RegenerationR5 | 0.758 | 3.005 | 0.17723 | 0.60671 | |
| RegenerationR6 | 0.779 | 3.005 | 0.20287 | 0.54457 | |
| RegenerationBL | 1.509 | 3.005 | 0.04212 | 0.23358 | |
| RegenerationTP | -0.05 | 3.005 | 0.96337 | 1.00000 |
Genes with expression patterns similar to MligTC455_19904
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19904 | 276 | 5.75 | Mlig455_041003 | Neo: - Age: - |
CLIP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_041003 {REF} {Length: 3725} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=148.6]; CLIP1 zinc knuckle [PF16641.7, score=54.0]; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=25.9]; Uso1 / p115 like vesicle tethering protein, C terminal region [PF04871.15, score=21.6]; Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=20.1]; Vacuolar sorting 38 and autophagy-related subunit 14 [PF10186.11, score=19.0]; PDZ domain of MCC-2 bdg protein for Usher syndrome [PF10506.11, score=18.8]} {Human: ENSG00000130779, CLIP1, CAP-Gly domain containing linker protein 1, [RH, Score=226, Expect=2e-61]; ENSG00000106665, CLIP2, CAP-Gly domain containing linker protein 2, [RH, Score=215, Expect=6e-58]} {Mouse: ENSMUSG00000049550, Clip1, CAP-GLY domain containing linker protein 1, [RH, Score=221, Expect=6e-60]; ENSMUSG00000063146, Clip2, CAP-GLY domain containing linker protein 2, [RH, Score=212, Expect=3e-57]} {Dmel: FBgn0020503, CLIP-190, Cytoplasmic linker protein 190, [RH, Score=216, Expect=2e-58]} {Celegans: WBGene00001017, dnc-1, DyNactin Complex component, [Score=72.8, Expect=8e-13]} {Smed: dd_Smed_v6_6651_0_1, dd_Smed_v6_6651_0_1, [Score=191, Expect=1e-50]} {RNA1509_55044, RNA1509_6017} {RNA1310_1622, RNA1509_55044} {RNA1509_55044, RNA815_1338} |
| 2. | MligTC455_47288 | 377 | 7.86 | Mlig455_002368, Mlig455_044568 | Neo: - Age: Down-Down-Up |
ANGPT4 | 1.722 | - | 0.772 | 0.950 | - | - | - | Mlig455_002368 {REF} {Length: 2275} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=118.7]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=99.0, Expect=1e-22]; ENSG00000085265, FCN1, ficolin 1, [Score=99.0, Expect=3e-23]} {Mouse: ENSMUSG00000026835, Fcnb, ficolin B, [Score=99.0, Expect=2e-23]} {Dmel: FBgn0003326, sca, scabrous, [Score=93.6, Expect=7e-21]} {Celegans: WBGene00020516, T15B7.1, [Score=58.9, Expect=1e-09]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=76.3, Expect=2e-15]} {RNA1509_25154} {RNA1310_17005} {RNA815_14675} Mlig455_044568 {REF} {Length: 2278} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=117.0]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=99.4, Expect=9e-23]; ENSG00000085265, FCN1, ficolin 1, [Score=94.7, Expect=1e-21]} {Mouse: ENSMUSG00000026835, Fcnb, ficolin B, [Score=94.7, Expect=5e-22]; ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=92.8, Expect=4e-21]; ENSMUSG00000002289, Angptl4, angiopoietin-like 4, [Score=92.4, Expect=1e-20]; ENSMUSG00000026725, Tnn, tenascin N, [Score=92.0, Expect=4e-20]; ENSMUSG00000022309, Angpt1, angiopoietin 1, [Score=91.7, Expect=3e-20]} {Dmel: FBgn0003326, sca, scabrous, [Score=95.1, Expect=2e-21]} {Celegans: WBGene00020516, T15B7.1, [Score=62.0, Expect=1e-10]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=77.0, Expect=1e-15]} {RNA1509_25154} {RNA1310_17005, RNA1509_25154} {RNA1509_25154, RNA815_14675} |
| 3. | MligTC455_32749 | 444 | 9.24 | Mlig455_034970 | Neo: - Age: - |
SYNRG | 1.703 | - | - | 0.735 | 0.968 | - | - | Mlig455_034970 {REF} {Length: 5291} {TRANSSPLICED} {Human: ENSG00000275066, SYNRG, synergin gamma, [RH, Score=81.6, Expect=6e-15]; ENSG00000274047, SYNRG, synergin gamma, [RH, Score=81.6, Expect=6e-15]} {Mouse: ENSMUSG00000034940, Synrg, synergin, gamma, [RH, Score=80.1, Expect=1e-14]} {Celegans: WBGene00011218, R10E11.6, [RH, Score=65.9, Expect=5e-11]} {Smed: dd_Smed_v6_8044_0_1, dd_Smed_v6_8044_0_1, [RH, Score=71.2, Expect=2e-12]} {RNA1509_23685, RNA1509_56509} {RNA1310_5432, RNA1509_56509} {RNA1509_56509, RNA815_2849} |
| 4. | MligTC455_30860 | 1595 | 33.23 | Mlig455_047536 | Neo: - Age: - |
TRIP12 | 1.657 | - | - | - | 0.950 | 0.707 | - | Mlig455_047536 {REF} {Length: 5542} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=253.2]} {Human: ENSG00000153827, TRIP12, thyroid hormone receptor interactor 12, [Score=529, Expect=2e-168]} {Mouse: ENSMUSG00000026219, Trip12, thyroid hormone receptor interactor 12, [Score=523, Expect=2e-166]} {Dmel: FBgn0260794, ctrip, circadian trip, [RH, Score=326, Expect=1e-96]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [Score=246, Expect=1e-69]} {Smed: dd_Smed_v6_2525_0_4, dd_Smed_v6_2525_0_4, [Score=396, Expect=4e-121]} {RNA1509_1044} {RNA1310_351.2} {RNA815_5070} |
| 5. | MligTC455_15349 | 404 | 8.41 | Mlig455_026642 | Neo: - Age: logFC(26M/2M)=-0.377 |
1.654 | - | - | - | 0.704 | 0.950 | - | Mlig455_026642 {REF} {Length: 3114} {Pfam: EF-hand domain [PF13405.8, score=70.7]; EF-hand domain pair [PF13499.8, score=54.9]; EF hand [PF00036.34, score=48.7]; EF-hand domain pair [PF13833.8, score=33.4]; EF-hand domain [PF08976.13, score=22.0]} {Dmel: FBgn0038163, CG10841, [RH, Score=209, Expect=1e-56]} {Smed: dd_Smed_v6_8441_0_1, dd_Smed_v6_8441_0_1, [RH, Score=828, Expect=0.0]} {RNA1509_4624} {RNA1310_4455} {RNA815_1290} | |
| 6. | MligTC455_25323 | 440 | 9.16 | Mlig455_044300 | Neo: - Age: - |
0.967 | - | - | - | 0.967 | - | - | Mlig455_044300 {REF} {Length: 4648} {Pfam: DDE superfamily endonuclease [PF13358.8, score=47.2]} {Dmel: FBgn0263076, Klp54D, Kinesin-like protein at 54D, [Score=76.6, Expect=7e-14]} {Smed: dd_Smed_v6_15852_0_1, dd_Smed_v6_15852_0_1, [Score=106, Expect=1e-24]} {RNA1509_56341} {RNA1310_5922.1} {RNA815_12097} | |
| 7. | MligTC455_35117 | 347 | 7.22 | Mlig455_049394 | Neo: - Age: Up-Up-Down |
0.958 | - | - | - | - | - | 0.958 | Mlig455_049394 {REF} {Length: 2696} {NoTransDecoderORF} {RNA1509_26681} {RNA1310_40886, RNA1509_26681} {RNA1509_26681, RNA815_17792} | |
| 8. | MligTC455_53787 | 269 | 5.6 | Mlig455_023349 | Neo: - Age: Up-Down-Down |
MPDZ | 0.957 | - | - | - | - | 0.957 | - | Mlig455_023349 {REF} {Length: 8123} {Pfam: PDZ domain [PF00595.26, score=507.0]; PDZ domain [PF17820.3, score=249.1]; PDZ domain [PF13180.8, score=188.6]; Family of unknown function (DUF6288) [PF19805.1, score=25.5]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [Score=421, Expect=2e-118]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [Score=419, Expect=5e-118]} {Dmel: FBgn0067864, Patj, [RH, Score=234, Expect=3e-63]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [RH, Score=174, Expect=3e-43]} {Smed: dd_Smed_v6_5376_0_3, dd_Smed_v6_5376_0_3, [Score=368, Expect=2e-103]} {RNA1509_9181} {RNA1310_504} {RNA815_2967} |
| 9. | MligTC455_21134 | 997 | 20.77 | Mlig455_003592, Mlig455_015398 | Neo: - Age: Up-Down-Down |
KMT2C | 0.955 | - | - | - | 0.955 | - | - | Mlig455_003592 {REF} {Length: 5094} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=64.7]; PHD-zinc-finger like domain [PF13832.8, score=31.6]; PHD-like zinc-binding domain [PF13771.8, score=24.3]; F/Y-rich N-terminus [PF05964.16, score=18.6]} {Human: ENSG00000055609, KMT2C, lysine methyltransferase 2C, [Score=211, Expect=1e-54]; ENSG00000167548, KMT2D, lysine methyltransferase 2D, [Score=204, Expect=3e-52]} {Mouse: ENSMUSG00000038056, Kmt2c, lysine (K)-specific methyltransferase 2C, [Score=210, Expect=1e-54]; ENSMUSG00000048154, Kmt2d, lysine (K)-specific methyltransferase 2D, [Score=204, Expect=2e-52]} {Dmel: FBgn0023518, trr, trithorax-related, [Score=186, Expect=3e-47]} {Celegans: WBGene00011729, set-16, Histone-lysine N-methyltransferase, [Score=148, Expect=1e-35]} {Smed: dd_Smed_v6_6838_0_1, dd_Smed_v6_6838_0_1, [Score=198, Expect=2e-51]} {RNA1509_12595} {RNA1310_1313.2} {RNA815_2378} Mlig455_015398 {REF} {Length: 5040} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=64.7]; PHD-zinc-finger like domain [PF13832.8, score=30.6]; PHD-like zinc-binding domain [PF13771.8, score=23.5]; F/Y-rich N-terminus [PF05964.16, score=18.6]} {Human: ENSG00000055609, KMT2C, lysine methyltransferase 2C, [Score=208, Expect=6e-54]; ENSG00000167548, KMT2D, lysine methyltransferase 2D, [Score=202, Expect=1e-51]} {Mouse: ENSMUSG00000038056, Kmt2c, lysine (K)-specific methyltransferase 2C, [Score=208, Expect=8e-54]; ENSMUSG00000048154, Kmt2d, lysine (K)-specific methyltransferase 2D, [Score=202, Expect=8e-52]} {Dmel: FBgn0023518, trr, trithorax-related, [Score=183, Expect=4e-46]} {Celegans: WBGene00011729, set-16, Histone-lysine N-methyltransferase, [Score=148, Expect=1e-35]} {Smed: dd_Smed_v6_6838_0_1, dd_Smed_v6_6838_0_1, [Score=197, Expect=5e-51]} {RNA1509_12595, RNA1509_14006, RNA1509_7046} {RNA1310_1313.2, RNA1509_14006, RNA1509_7046} {RNA1509_14006, RNA1509_7046, RNA815_2378} |
| 10. | MligTC455_46311 | 178 | 3.71 | Mlig455_024248 | Neo: - Age: Down-Up-Down |
NISCH | 0.954 | - | - | - | - | - | 0.954 | Mlig455_024248 {REF} {Length: 4779} {TRANSSPLICED} {Pfam: Leucine-rich repeat [PF14580.8, score=44.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=40.7]; Leucine rich repeat [PF13855.8, score=33.7]; PX domain [PF00787.26, score=25.6]} {Human: ENSG00000010322, NISCH, nischarin, [Score=298, Expect=8e-91]} {Mouse: ENSMUSG00000021910, Nisch, nischarin, [Score=286, Expect=1e-86]} {Dmel: FBgn0033996, CG11807, [Score=201, Expect=7e-56]} {Celegans: WBGene00008750, F13E9.1, [Score=188, Expect=2e-51]} {Smed: dd_Smed_v6_8533_0_5, dd_Smed_v6_8533_0_5, [Score=196, Expect=4e-54]} {RNA1509_31748} {RNA1310_12578} {RNA815_13327} |
| 11. | MligTC455_54141 | 314 | 6.55 | Mlig455_029404 | Neo: - Age: - |
WHRN | 0.954 | - | - | - | - | 0.954 | - | Mlig455_029404 {REF} {Length: 3333} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=134.1]; PDZ domain [PF17820.3, score=91.4]; PDZ domain [PF13180.8, score=46.4]} {Human: ENSG00000095397, WHRN, whirlin, [RH, Score=204, Expect=4e-54]} {Mouse: ENSMUSG00000039137, Whrn, whirlin, [RH, Score=203, Expect=4e-54]} {Dmel: FBgn0264006, dysc, dyschronic, [RH, Score=161, Expect=3e-40]} {Celegans: WBGene00010444, magi-1, MAGI (Membrane Associated Guanylate kinase Inverted) homolog, [Score=67.8, Expect=2e-11]} {Smed: dd_Smed_v6_17308_0_1, dd_Smed_v6_17308_0_1, [RH, Score=87.4, Expect=1e-17]} {RNA1509_25200} {RNA1310_7486} {RNA815_5120} |
| 12. | MligTC455_26928 | 570 | 11.87 | Mlig455_032950 | Neo: - Age: logFC(26M/2M)=-0.353 |
DNAAF2 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_032950 {REF} {Length: 5987} {TRANSSPLICED} {Pfam: PIH1 N-terminal domain [PF08190.14, score=164.4]; PIH1 CS-like domain [PF18201.3, score=70.8]} {Human: ENSG00000165506, DNAAF2, dynein axonemal assembly factor 2, [RH, Score=208, Expect=8e-56]} {Mouse: ENSMUSG00000020973, Dnaaf2, dynein, axonemal assembly factor 2, [RH, Score=197, Expect=2e-52]} {Dmel: FBgn0033224, Nop17l, Nop17 like, [RH, Score=236, Expect=1e-65]} {Smed: dd_Smed_v6_14336_0_1, dd_Smed_v6_14336_0_1, [RH, Score=310, Expect=9e-94]} {RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1310_6945.1, RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1509_15744, RNA1509_20346, RNA1509_21241, RNA815_416.1} |
| 13. | MligTC455_43641 | 1815 | 37.81 | Mlig455_012350, Mlig455_012727 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_012350 {REF} {Length: 1834} {TRANSSPLICED} {Pfam: Immunoglobulin V-set domain [PF07686.19, score=19.8]} {RNA1509_12109} {RNA1310_16228, RNA1509_12109} {RNA1509_12109, RNA815_15191} Mlig455_012727 {REF} {Length: 4556} {Pfam: Immunoglobulin V-set domain [PF07686.19, score=19.5]} {RNA1509_12109, RNA1509_48222} {RNA1310_16228, RNA1509_48222} {RNA1509_48222, RNA815_15191} |
|
| 14. | MligTC455_50875 | 99 | 2.05 | Mlig455_066419 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_066419 {REF} {Length: 1122} {NoTransDecoderORF} {RNA1509_21226} {RNA1310_71629} {RNA815_14011} | |
| 15. | MligTC455_27428 | 621 | 12.94 | Mlig455_018304 | Neo: - Age: logFC(26M/2M)=-0.197 Region-enriched R2: 1.678/0.01399 |
RAB18 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_018304 {REF} {Length: 2563} {Pfam: Ras family [PF00071.24, score=191.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=123.0]; ADP-ribosylation factor family [PF00025.23, score=68.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=28.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.4]; RsgA GTPase [PF03193.18, score=26.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.2]; AAA domain [PF13479.8, score=19.5]; AAA domain [PF13401.8, score=18.9]} {Human: ENSG00000099246, RAB18, RAB18, member RAS oncogene family, [RH, Score=286, Expect=6e-99]} {Mouse: ENSMUSG00000073639, Rab18, RAB18, member RAS oncogene family, [RH, Score=288, Expect=6e-100]} {Dmel: FBgn0015794, Rab18, [RH, Score=193, Expect=1e-62]} {Celegans: WBGene00004277, rab-18, Ras-related protein Rab-18, [RH, Score=263, Expect=5e-90]} {Smed: dd_Smed_v6_4001_0_1, dd_Smed_v6_4001_0_1, [RH, Score=292, Expect=7e-102]} {RNA1509_33888} {RNA1310_22965, RNA1509_33888} {RNA1509_33888, RNA815_9889} |
| 16. | MligTC455_21136 | 487 | 10.15 | Mlig455_041556 | Neo: - Age: logFC(26M/2M)=0.559 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_041556 {REF} {Length: 1371} {NoTransDecoderORF} {RNA1509_14006} {RNA1310_16944} {RNA815_1283} |
Berezikov Lab - 2020-2021 © ERIBA