Data search
Results for MligTC455_27428
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27428 | 621 | 12.94 | Mlig455_018304 | Neo: - Age: logFC(26M/2M)=-0.197 Region-enriched R2: 1.678/0.01399 |
RAB18 | Mlig455_018304 {REF} {Length: 2563} {Pfam: Ras family [PF00071.24, score=191.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=123.0]; ADP-ribosylation factor family [PF00025.23, score=68.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=28.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.4]; RsgA GTPase [PF03193.18, score=26.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.2]; AAA domain [PF13479.8, score=19.5]; AAA domain [PF13401.8, score=18.9]} {Human: ENSG00000099246, RAB18, RAB18, member RAS oncogene family, [RH, Score=286, Expect=6e-99]} {Mouse: ENSMUSG00000073639, Rab18, RAB18, member RAS oncogene family, [RH, Score=288, Expect=6e-100]} {Dmel: FBgn0015794, Rab18, [RH, Score=193, Expect=1e-62]} {Celegans: WBGene00004277, rab-18, Ras-related protein Rab-18, [RH, Score=263, Expect=5e-90]} {Smed: dd_Smed_v6_4001_0_1, dd_Smed_v6_4001_0_1, [RH, Score=292, Expect=7e-102]} {RNA1509_33888} {RNA1310_22965, RNA1509_33888} {RNA1509_33888, RNA815_9889} |
Cumulative graph for MligTC455_27428
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.073 | 4.011 | 0.35206 | 0.99536 | |
| RegionR2 | 1.678 | 4.011 | 0.00053 | 0.01399 | |
| RegionR3 | 0.227 | 4.011 | 0.54727 | 1.00000 | |
| RegionR4 | 0.006 | 4.011 | 0.98911 | 1.00000 | |
| RegionR5 | -0.315 | 4.011 | 0.38626 | 0.74175 | |
| RegionR6 | -0.244 | 4.011 | 0.54831 | 1.00000 | |
| RegionR7 | -0.892 | 4.011 | 0.11819 | 0.64956 | |
| RegionR8 | 0.613 | 4.011 | 0.26847 | 0.89179 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.045 | 4.011 | 0.58874 | 1.00000 | |
| RegenerationR2 | 0.573 | 4.011 | 0.11097 | 0.52077 | |
| RegenerationR3 | 0.667 | 4.011 | 0.14287 | 0.56920 | |
| RegenerationR4 | 0.166 | 4.011 | 0.72402 | 0.96293 | |
| RegenerationR5 | 0.586 | 4.011 | 0.16371 | 0.58841 | |
| RegenerationR6 | 0.603 | 4.011 | 0.22674 | 0.57184 | |
| RegenerationBL | 0.998 | 4.011 | 0.08755 | 0.34693 | |
| RegenerationTP | 0.339 | 4.011 | 0.59539 | 0.95802 |
Genes with expression patterns similar to MligTC455_27428
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27428 | 621 | 12.94 | Mlig455_018304 | Neo: - Age: logFC(26M/2M)=-0.197 Region-enriched R2: 1.678/0.01399 |
RAB18 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018304 {REF} {Length: 2563} {Pfam: Ras family [PF00071.24, score=191.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=123.0]; ADP-ribosylation factor family [PF00025.23, score=68.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=28.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.4]; RsgA GTPase [PF03193.18, score=26.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.2]; AAA domain [PF13479.8, score=19.5]; AAA domain [PF13401.8, score=18.9]} {Human: ENSG00000099246, RAB18, RAB18, member RAS oncogene family, [RH, Score=286, Expect=6e-99]} {Mouse: ENSMUSG00000073639, Rab18, RAB18, member RAS oncogene family, [RH, Score=288, Expect=6e-100]} {Dmel: FBgn0015794, Rab18, [RH, Score=193, Expect=1e-62]} {Celegans: WBGene00004277, rab-18, Ras-related protein Rab-18, [RH, Score=263, Expect=5e-90]} {Smed: dd_Smed_v6_4001_0_1, dd_Smed_v6_4001_0_1, [RH, Score=292, Expect=7e-102]} {RNA1509_33888} {RNA1310_22965, RNA1509_33888} {RNA1509_33888, RNA815_9889} |
| 2. | MligTC455_45173 | 1421 | 29.61 | Mlig455_000256 | Neo: - Age: Up-Down-Up Region-enriched R2: 2.313/0.00035 |
1.729 | - | - | - | - | 0.951 | 0.778 | Mlig455_000256 {REF} {Length: 574} {RNA1509_48066} {RNA1310_71808.1} {RNA815_32033} | |
| 3. | MligTC455_45174 | 1447 | 30.15 | Mlig455_058539 | Neo: - Age: - Region-enriched R2: 2.293/0.00024 |
MLX | 1.727 | - | - | - | - | 0.950 | 0.777 | Mlig455_058539 {REF} {Length: 4178} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=41.6]} {Human: ENSG00000108788, MLX, MLX, MAX dimerization protein, [RH, Score=145, Expect=5e-42]} {Mouse: ENSMUSG00000017801, Mlx, MAX-like protein X, [RH, Score=144, Expect=8e-42]} {Dmel: FBgn0039509, bigmax, [RH, Score=130, Expect=2e-36]} {Smed: dd_Smed_v6_3140_0_1, dd_Smed_v6_3140_0_1, [RH, Score=163, Expect=3e-48]} {RNA1509_10793} {RNA1310_22883.1, RNA1509_10793} {RNA1509_10793, RNA815_10829} |
| 4. | MligTC455_44513 | 1822 | 37.96 | Mlig455_044390 | Neo: - Age: Down-Up-Up Region-specific R2: 2.967 Region-enriched R2: 2.054/0.00008 |
0.976 | - | - | - | - | 0.976 | - | Mlig455_044390 {REF} {Length: 727} {Smed: dd_Smed_v6_5576_0_1, dd_Smed_v6_5576_0_1, [Score=93.2, Expect=5e-25]} {RNA1509_30750, RNA1509_53240, RNA1509_6792} {RNA1310_36193, RNA1509_30750, RNA1509_53240, RNA1509_6792} {RNA1509_30750, RNA1509_53240, RNA1509_6792, RNA815_16957} | |
| 5. | MligTC455_26324 | 2227 | 46.4 | Mlig455_067472 | Neo: - Age: - Region-enriched R2: 4.150/0.00003 |
0.967 | - | - | - | - | 0.967 | - | Mlig455_067472 {REF} {Length: 918} {Smed: dd_Smed_v6_1588_0_1, dd_Smed_v6_1588_0_1, [Score=42.7, Expect=2e-06]} {RNA1509_6938} {RNA1310_54464.2} {RNA815_23024.2} | |
| 6. | MligTC455_35294 | 1547 | 32.23 | Mlig455_001167, Mlig455_001326, Mlig455_070580 | Neo: - Age: Down-Up-Up Region-enriched R8: 1.741/0.00233 |
GRIA2, GRID1 | 0.967 | - | - | - | - | 0.967 | - | Mlig455_001167 {REF} {Length: 3625} {Pfam: Ligand-gated ion channel [PF00060.28, score=89.8]; Universal stress protein family [PF00582.28, score=80.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.4]; Receptor family ligand binding region [PF01094.30, score=23.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=19.3]} {Human: ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=123, Expect=6e-28]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=120, Expect=3e-27]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=117, Expect=5e-26]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=123, Expect=3e-28]; ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=117, Expect=4e-26]} {Dmel: FBgn0038837, CG3822, [Score=124, Expect=9e-29]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=113, Expect=2e-25]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=220, Expect=2e-63]} {RNA1509_17988} {RNA1310_23557} {RNA815_11623.1} Mlig455_001326 {REF} {Length: 3494} {Pfam: Ligand-gated ion channel [PF00060.28, score=92.1]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.4]; Receptor family ligand binding region [PF01094.30, score=23.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=19.8]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=121, Expect=2e-27]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=118, Expect=2e-26]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=124, Expect=2e-28]} {Dmel: FBgn0038840, Grik, [Score=125, Expect=7e-29]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=114, Expect=1e-25]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=220, Expect=9e-64]} {RNA1509_17988} {RNA1310_23557} {RNA815_11623.1} Mlig455_070580 {REF} {Length: 3686} {Pfam: Ligand-gated ion channel [PF00060.28, score=92.1]; Universal stress protein family [PF00582.28, score=80.3]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=33.4]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=33.2]; Receptor family ligand binding region [PF01094.30, score=22.8]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=125, Expect=1e-28]; ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=128, Expect=1e-29]} {Dmel: FBgn0038837, CG3822, [Score=135, Expect=4e-32]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=119, Expect=4e-27]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=237, Expect=2e-69]} {RNA1509_17988} {RNA1310_23557} {RNA815_11623.1} |
| 7. | MligTC455_46698 | 2235 | 46.56 | Mlig455_009652 | Neo: - Age: Down-Up-Up Region-enriched R2: 2.372/0.00045 Regeneration-depleted TP: -3.177 |
0.957 | - | - | - | - | 0.957 | - | Mlig455_009652 {REF} {Length: 763} {Pfam: WD repeat binding protein EZH2 [PF11616.10, score=33.2]; NOPS (NUC059) domain [PF08075.13, score=29.1]} {RNA1509_45891} {RNA1310_92759} {RNA815_24028} | |
| 8. | MligTC455_48218 | 1632 | 34 | Mlig455_054782, Mlig455_054874 | Neo: - Age: Down-Down-Up Region-specific R2: 3.792 Region-enriched R2: 2.673/0.00000 Regeneration-downregulated BL: -2.255 Regeneration-depleted BL: -2.255 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_054782 {REF} {Length: 1928} {RNA1509_16585} {RNA1310_35143} {RNA815_1375.1} Mlig455_054874 {REF} {Length: 2445} {RNA1509_16585} {RNA1310_35143, RNA1509_16585} {RNA1509_16585, RNA815_1375.1} |
|
| 9. | MligTC455_19904 | 276 | 5.75 | Mlig455_041003 | Neo: - Age: - |
CLIP1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_041003 {REF} {Length: 3725} {TRANSSPLICED} {Pfam: CAP-Gly domain [PF01302.27, score=148.6]; CLIP1 zinc knuckle [PF16641.7, score=54.0]; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=25.9]; Uso1 / p115 like vesicle tethering protein, C terminal region [PF04871.15, score=21.6]; Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=20.1]; Vacuolar sorting 38 and autophagy-related subunit 14 [PF10186.11, score=19.0]; PDZ domain of MCC-2 bdg protein for Usher syndrome [PF10506.11, score=18.8]} {Human: ENSG00000130779, CLIP1, CAP-Gly domain containing linker protein 1, [RH, Score=226, Expect=2e-61]; ENSG00000106665, CLIP2, CAP-Gly domain containing linker protein 2, [RH, Score=215, Expect=6e-58]} {Mouse: ENSMUSG00000049550, Clip1, CAP-GLY domain containing linker protein 1, [RH, Score=221, Expect=6e-60]; ENSMUSG00000063146, Clip2, CAP-GLY domain containing linker protein 2, [RH, Score=212, Expect=3e-57]} {Dmel: FBgn0020503, CLIP-190, Cytoplasmic linker protein 190, [RH, Score=216, Expect=2e-58]} {Celegans: WBGene00001017, dnc-1, DyNactin Complex component, [Score=72.8, Expect=8e-13]} {Smed: dd_Smed_v6_6651_0_1, dd_Smed_v6_6651_0_1, [Score=191, Expect=1e-50]} {RNA1509_55044, RNA1509_6017} {RNA1310_1622, RNA1509_55044} {RNA1509_55044, RNA815_1338} |
| 10. | MligTC455_46697 | 2841 | 59.19 | Mlig455_009247 | Neo: - Age: - Region-enriched R2: 2.282/0.00076 Regeneration-downregulated BL: -2.847 Regeneration-depleted BL: -2.847 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_009247 {REF} {Length: 774} {Pfam: WD repeat binding protein EZH2 [PF11616.10, score=40.0]; NOPS (NUC059) domain [PF08075.13, score=34.4]} {RNA1509_12661} {RNA1310_96333} {RNA815_24028} |