Data search
Results for MligTC455_20089
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20089 | 751 | 15.64 | Mlig455_002088 | Neo: - Age: - |
Mlig455_002088 {REF} {Length: 1181} {Pfam: Domain of unknown function (DUF4570) [PF15134.8, score=52.3]} {Smed: dd_Smed_v6_13889_0_1, dd_Smed_v6_13889_0_1, [RH, Score=87.8, Expect=8e-21]} {RNA1509_56785} {RNA1310_23624} {RNA815_15856.1} |
Cumulative graph for MligTC455_20089
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.97 | 4.283 | 0.03366 | 0.46155 | |
| RegionR2 | 1.053 | 4.283 | 0.14787 | 0.47984 | |
| RegionR3 | 1.13 | 4.283 | 0.07628 | 0.48912 | |
| RegionR4 | 1.311 | 4.283 | 0.05591 | 0.20809 | |
| RegionR5 | 0.725 | 4.283 | 0.34242 | 0.69038 | |
| RegionR6 | 1.347 | 4.283 | 0.02307 | 0.27588 | |
| RegionR7 | 0.721 | 4.283 | 0.41588 | 1.00000 | |
| RegionR8 | 0.682 | 4.283 | 0.49475 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.826 | 4.283 | 0.53058 | 1.00000 | |
| RegenerationR2 | 0.253 | 4.283 | 0.38803 | 0.80695 | |
| RegenerationR3 | -0.24 | 4.283 | 0.48679 | 0.85333 | |
| RegenerationR4 | 0.096 | 4.283 | 0.79116 | 0.98415 | |
| RegenerationR5 | 0.142 | 4.283 | 0.67426 | 0.94269 | |
| RegenerationR6 | -0.694 | 4.283 | 0.05349 | 0.28982 | |
| RegenerationBL | 0.162 | 4.283 | 0.71215 | 1.00000 | |
| RegenerationTP | 0.426 | 4.283 | 0.39182 | 0.82340 |
Genes with expression patterns similar to MligTC455_20089
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20089 | 751 | 15.64 | Mlig455_002088 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002088 {REF} {Length: 1181} {Pfam: Domain of unknown function (DUF4570) [PF15134.8, score=52.3]} {Smed: dd_Smed_v6_13889_0_1, dd_Smed_v6_13889_0_1, [RH, Score=87.8, Expect=8e-21]} {RNA1509_56785} {RNA1310_23624} {RNA815_15856.1} | |
| 2. | MligTC455_17044 | 502 | 10.46 | Mlig455_015598 | Neo: - |
PUF60 | 2.466 | - | - | 0.951 | 0.740 | - | 0.775 | Mlig455_015598 {REF} {Length: 4506} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=145.2]; RNA recognition motif [PF16367.7, score=26.9]} {Human: ENSG00000274081, PUF60, poly(U) binding splicing factor 60, [Score=308, Expect=4e-97]; ENSG00000179950, PUF60, poly(U) binding splicing factor 60, [Score=308, Expect=7e-97]} {Mouse: ENSMUSG00000002524, Puf60, poly-U binding splicing factor 60, [Score=310, Expect=2e-97]} {Dmel: FBgn0028577, hfp, half pint, [RH, Score=225, Expect=2e-64]} {Celegans: WBGene00004389, rnp-6, RNP (RRM RNA binding domain) containing, [RH, Score=229, Expect=4e-69]} {Smed: dd_Smed_v6_3853_0_3, dd_Smed_v6_3853_0_3, [Score=350, Expect=6e-114]} {RNA1509_18272, RNA1509_23731} {RNA1310_20367.1, RNA1509_23731} {RNA1509_23731, RNA815_10999} |
| 3. | MligTC455_23774 | 749 | 15.6 | Mlig455_051848, Mlig455_051861 | Neo: - Age: - Region-enriched R7: 1.943/0.04725 |
1.798 | 0.970 | - | - | - | - | 0.828 | Mlig455_051848 {REF} {Length: 1676} {RNA1509_43013} {RNA1310_12180.2} {RNA815_6222} Mlig455_051861 {REF} {Length: 1572} {RNA1509_43013} {RNA1310_12180.2} {RNA815_6222} |
|
| 4. | MligTC455_40240 | 1636 | 34.08 | Mlig455_028306 | Neo: - Age: - Region-enriched R4: 1.764/0.00013 |
UBE2U | 1.798 | - | - | - | 0.836 | 0.962 | - | Mlig455_028306 {REF} {Length: 1313} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=94.1]} {Human: ENSG00000177414, UBE2U, ubiquitin conjugating enzyme E2 U, [RH, Score=126, Expect=4e-33]} {Mouse: ENSMUSG00000069733, Ube2u, ubiquitin-conjugating enzyme E2U (putative), [RH, Score=114, Expect=1e-28]} {Dmel: FBgn0267383, Ubc87F, Ubiquitin conjugating enzyme 87F, [Score=81.6, Expect=3e-18]} {Celegans: WBGene00006704, ubc-7, Probable ubiquitin-conjugating enzyme E2 7, [Score=81.6, Expect=2e-18]} {Smed: dd_Smed_v6_998_0_1, dd_Smed_v6_998_0_1, [Score=77.0, Expect=9e-17]} {RNA1509_12895} {RNA1310_17637} {RNA815_16983} |
| 5. | MligTC455_16266 | 219 | 4.57 | Mlig455_008514 | Neo: - Age: Down-Down-Up |
SUGT1 | 1.719 | - | - | 0.763 | - | 0.956 | - | Mlig455_008514 {REF} {Length: 1054} {TRANSSPLICED} {Pfam: SGS domain [PF05002.17, score=109.8]; CS domain [PF04969.18, score=26.1]} {Human: ENSG00000165416, SUGT1, SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, [RH, Score=124, Expect=2e-33]} {Mouse: ENSMUSG00000022024, Sugt1, SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), [RH, Score=129, Expect=1e-35]} {Dmel: FBgn0265101, Sgt1, suppressor-of-G2-allele-of-skp1, [RH, Score=118, Expect=5e-33]} {Celegans: WBGene00008371, D1054.3, [RH, Score=119, Expect=3e-33]} {Smed: dd_Smed_v6_3826_0_1, dd_Smed_v6_3826_0_1, [RH, Score=116, Expect=1e-32]} {RNA1509_14874} {RNA1310_20250} {RNA815_14921} |
| 6. | MligTC455_50152 | 714 | 14.88 | Mlig455_061604 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.803/0.00026 |
MPC2 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_061604 {REF} {Length: 1611} {TRANSSPLICED} {Pfam: Mitochondrial pyruvate carriers [PF03650.15, score=143.4]} {Human: ENSG00000143158, MPC2, mitochondrial pyruvate carrier 2, [RH, Score=145, Expect=1e-45]} {Mouse: ENSMUSG00000026568, Mpc2, mitochondrial pyruvate carrier 2, [RH, Score=130, Expect=4e-40]} {Dmel: FBgn0037715, CG9399, [RH, Score=151, Expect=6e-48]} {Celegans: WBGene00018765, mpc-2, Probable mitochondrial pyruvate carrier 2, [RH, Score=137, Expect=6e-43]} {Smed: dd_Smed_v6_6084_0_1, dd_Smed_v6_6084_0_1, [RH, Score=179, Expect=7e-60]} {RNA1509_19569, RNA1509_38340, RNA1509_9799} {RNA1310_57693.1, RNA1509_38340, RNA1509_9799} {RNA1509_38340, RNA1509_9799, RNA815_30843} |
| 7. | MligTC455_30512 | 296 | 6.16 | Mlig455_057485 | Neo: - Age: - |
CPNE8 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_057485 {REF} {Length: 5002} {TRANSSPLICED} {Pfam: Copine [PF07002.18, score=261.8]; C2 domain [PF00168.32, score=88.0]; vWA found in TerF C terminus [PF10138.11, score=30.8]} {Human: ENSG00000139117, CPNE8, copine 8, [RH, Score=491, Expect=2e-167]; ENSG00000124772, CPNE5, copine 5, [RH, Score=475, Expect=5e-161]; ENSG00000085719, CPNE3, copine 3, [RH, Score=473, Expect=8e-161]; ENSG00000214078, CPNE1, copine 1, [RH, Score=467, Expect=2e-158]} {Mouse: ENSMUSG00000052560, Cpne8, copine VIII, [RH, Score=489, Expect=8e-167]; ENSMUSG00000024008, Cpne5, copine V, [RH, Score=480, Expect=5e-163]; ENSMUSG00000028228, Cpne3, copine III, [RH, Score=479, Expect=1e-163]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [RH, Score=383, Expect=3e-125]} {Smed: dd_Smed_v6_2149_0_1, dd_Smed_v6_2149_0_1, [RH, Score=544, Expect=0.0]} {RNA1509_30376} {RNA1310_21877.1} {RNA815_8974} |
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