TomoSeq data search

Data search

Results for MligTC455_30512

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30512

296

6.16

Mlig455_057485

Neo: -

Age: -

CPNE8

Mlig455_057485 {REF} {Length: 5002} {TRANSSPLICED} {Pfam: Copine [PF07002.18, score=261.8]; C2 domain [PF00168.32, score=88.0]; vWA found in TerF C terminus [PF10138.11, score=30.8]} {Human: ENSG00000139117, CPNE8, copine 8, [RH, Score=491, Expect=2e-167]; ENSG00000124772, CPNE5, copine 5, [RH, Score=475, Expect=5e-161]; ENSG00000085719, CPNE3, copine 3, [RH, Score=473, Expect=8e-161]; ENSG00000214078, CPNE1, copine 1, [RH, Score=467, Expect=2e-158]} {Mouse: ENSMUSG00000052560, Cpne8, copine VIII, [RH, Score=489, Expect=8e-167]; ENSMUSG00000024008, Cpne5, copine V, [RH, Score=480, Expect=5e-163]; ENSMUSG00000028228, Cpne3, copine III, [RH, Score=479, Expect=1e-163]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [RH, Score=383, Expect=3e-125]} {Smed: dd_Smed_v6_2149_0_1, dd_Smed_v6_2149_0_1, [RH, Score=544, Expect=0.0]} {RNA1509_30376} {RNA1310_21877.1} {RNA815_8974}

Cumulative graph for MligTC455_30512

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.671	3.099	0.36653	1.00000
RegionR2	0.58	3.099	0.36402	0.75871
RegionR3	0.63	3.099	0.17827	0.70757
RegionR4	0.163	3.099	0.78332	1.00000
RegionR5	-1.023	3.099	0.07840	0.25820
RegionR6	0.359	3.099	0.46907	1.00000
RegionR7	0.419	3.099	0.53053	1.00000
RegionR8	0.543	3.099	0.49328	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.398	3.099	0.59937	1.00000
RegenerationR2	0.303	3.099	0.52854	0.88322
RegenerationR3	0.351	3.099	0.48825	0.85377
RegenerationR4	-0.047	3.099	0.93631	1.00000
RegenerationR5	1.551	3.099	0.00180	0.07304
RegenerationR6	0.962	3.099	0.06636	0.32350
RegenerationBL	0.898	3.099	0.17777	0.50609
RegenerationTP	-0.459	3.099	0.56620	0.94219

Genes with expression patterns similar to MligTC455_30512

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30512	296	6.16	Mlig455_057485	Neo: - Age: -	CPNE8	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_057485 {REF} {Length: 5002} {TRANSSPLICED} {Pfam: Copine [PF07002.18, score=261.8]; C2 domain [PF00168.32, score=88.0]; vWA found in TerF C terminus [PF10138.11, score=30.8]} {Human: ENSG00000139117, CPNE8, copine 8, [RH, Score=491, Expect=2e-167]; ENSG00000124772, CPNE5, copine 5, [RH, Score=475, Expect=5e-161]; ENSG00000085719, CPNE3, copine 3, [RH, Score=473, Expect=8e-161]; ENSG00000214078, CPNE1, copine 1, [RH, Score=467, Expect=2e-158]} {Mouse: ENSMUSG00000052560, Cpne8, copine VIII, [RH, Score=489, Expect=8e-167]; ENSMUSG00000024008, Cpne5, copine V, [RH, Score=480, Expect=5e-163]; ENSMUSG00000028228, Cpne3, copine III, [RH, Score=479, Expect=1e-163]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [RH, Score=383, Expect=3e-125]} {Smed: dd_Smed_v6_2149_0_1, dd_Smed_v6_2149_0_1, [RH, Score=544, Expect=0.0]} {RNA1509_30376} {RNA1310_21877.1} {RNA815_8974}
2.	MligTC455_14565	555	11.56	Mlig455_025146	Neo: - Age: -		1.697	0.953	-	-	-	-	0.744	Mlig455_025146 {REF} {Length: 2733} {TRANSSPLICED} {RNA1509_11357} {RNA1310_10080.1, RNA1509_11357} {RNA1509_11357, RNA815_13917}
3.	MligTC455_24088	1082	22.53	Mlig455_017398, Mlig455_030918	Neo: - Age: - Regeneration-downregulated TP: -2.327 Regeneration-depleted TP: -2.327	CBS	1.682	0.704	-	-	-	0.978	-	Mlig455_017398 {REF} {Length: 2236} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=216.9]; CBS domain [PF00571.30, score=48.7]} {Human: ENSG00000160200, CBS, cystathionine-beta-synthase, [Score=593, Expect=0.0]; ENSG00000274276, CBSL, cystathionine-beta-synthase like, [Score=593, Expect=0.0]} {Mouse: ENSMUSG00000024039, Cbs, cystathionine beta-synthase, [Score=598, Expect=0.0]} {Dmel: FBgn0031148, Cbs, centrosomin's beautiful sister, [RH, Score=442, Expect=2e-151]} {Celegans: WBGene00013866, cbs-1, Cystathionine Beta-Synthase, [RH, Score=365, Expect=6e-119]} {Smed: dd_Smed_v6_1585_0_1, dd_Smed_v6_1585_0_1, [RH, Score=642, Expect=0.0]} {RNA1509_32341} {RNA1310_10466.1} {RNA815_2644.1} Mlig455_030918 {REF} {Length: 2927} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=199.2]; CBS domain [PF00571.30, score=49.2]} {Human: ENSG00000160200, CBS, cystathionine-beta-synthase, [Score=557, Expect=0.0]; ENSG00000274276, CBSL, cystathionine-beta-synthase like, [Score=557, Expect=0.0]} {Mouse: ENSMUSG00000024039, Cbs, cystathionine beta-synthase, [Score=558, Expect=0.0]} {Dmel: FBgn0031148, Cbs, centrosomin's beautiful sister, [Score=409, Expect=9e-139]} {Celegans: WBGene00013866, cbs-1, Cystathionine Beta-Synthase, [Score=335, Expect=4e-108]} {Smed: dd_Smed_v6_1585_0_1, dd_Smed_v6_1585_0_1, [Score=603, Expect=0.0]} {RNA1509_32341} {RNA1310_10466.1} {RNA815_2644.1}
4.	MligTC455_43302	297	6.19	Mlig455_001798	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.756		0.963	0.963	-	-	-	-	-	Mlig455_001798 {REF} {Length: 2162} {RNA1509_14667} {RNA1310_23413, RNA1509_14667} {RNA1509_14667, RNA815_13658}
5.	MligTC455_23774	749	15.6	Mlig455_051848, Mlig455_051861	Neo: - Age: - Region-enriched R7: 1.943/0.04725		0.961	0.961	-	-	-	-	-	Mlig455_051848 {REF} {Length: 1676} {RNA1509_43013} {RNA1310_12180.2} {RNA815_6222} Mlig455_051861 {REF} {Length: 1572} {RNA1509_43013} {RNA1310_12180.2} {RNA815_6222}
6.	MligTC455_47647	386	8.05	Mlig455_039025, Mlig455_039029	Neo: - Age: Down-Up-Down Region-enriched R8: 8.248/0.00000 Region-enriched R2: 6.877/0.00091 Region-enriched R7: 4.106/0.01478		0.961	0.961	-	-	-	-	-	Mlig455_039025 {REF} {Length: 996} {NoTransDecoderORF} {RNA1509_17584, RNA1509_53722, RNA1509_59811} {RNA1310_35546, RNA1509_17584, RNA1509_53722, RNA1509_59811} {RNA1509_17584, RNA1509_53722, RNA1509_59811, RNA815_23548} Mlig455_039029 {REF} {Length: 557} {NoTransDecoderORF} {RNA1509_17584} {RNA1310_35546} {RNA815_23548}
7.	MligTC455_25642	404	8.41	Mlig455_055674	Neo: - Age: logFC(26M/2M)=-0.267 Regeneration-downregulated BL: -3.906 Regeneration-depleted BL: -3.906	TRAF3	0.958	0.958	-	-	-	-	-	Mlig455_055674 {REF} {Length: 3425} {Pfam: TRAF-type zinc finger [PF02176.20, score=35.2]; Seven in absentia protein family [PF03145.18, score=32.2]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=68.9, Expect=2e-11]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=75.5, Expect=1e-13]; ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=72.0, Expect=1e-12]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_8046_0_1, dd_Smed_v6_8046_0_1, [Score=79.0, Expect=4e-15]} {RNA1509_45640} {RNA1310_11522} {RNA815_6004}
8.	MligTC455_07733	433	9.02	Mlig455_010369	Neo: - Age: -	PRKCE	0.954	-	-	-	0.954	-	-	Mlig455_010369 {REF} {Length: 6223} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=219.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=128.3]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=104.8]; Krr1 KH1 domain [PF17903.3, score=94.5]; C2 domain [PF00168.32, score=49.6]; Protein kinase C terminal domain [PF00433.26, score=36.3]; Kinase-like [PF14531.8, score=22.1]; ABC1 atypical kinase-like domain [PF03109.18, score=21.4]} {Human: ENSG00000171132, PRKCE, protein kinase C epsilon, [RH, Score=799, Expect=0.0]} {Mouse: ENSMUSG00000045038, Prkce, protein kinase C, epsilon, [RH, Score=798, Expect=0.0]} {Dmel: FBgn0003093, Pkc98E, Protein C kinase 98E, [RH, Score=781, Expect=0.0]} {Celegans: WBGene00004032, pkc-1, Protein kinase C-like 1B, [RH, Score=566, Expect=0.0]} {Smed: dd_Smed_v6_8010_0_1, dd_Smed_v6_8010_0_1, [Score=751, Expect=0.0]} {RNA1509_10559, RNA1509_50072} {RNA1310_6246, RNA1509_10559, RNA1509_50072} {RNA1509_10559, RNA1509_50072, RNA815_11360}
9.	MligTC455_02910	161	3.36	Mlig455_009657	Neo: - Age: Up-Down-Up		0.953	0.953	-	-	-	-	-	Mlig455_009657 {REF} {Length: 1037} {NoTransDecoderORF} {RNA1509_10368} {RNA1310_6915.2} {RNA815_1043.1}
10.	MligTC455_35002	390	8.12	Mlig455_070372	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.711	SVEP1	0.953	0.953	-	-	-	-	-	Mlig455_070372 {REF} {Length: 1042} {Pfam: EGF-like domain [PF00008.29, score=33.8]; EGF-like domain [PF07974.15, score=21.9]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=51.6, Expect=3e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=51.2, Expect=4e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=58.9, Expect=5e-10]} {Dmel: FBgn0004647, N, Notch, [Score=50.1, Expect=4e-07]} {RNA1509_29817} {RNA1310_28236} {RNA815_11876.1}
11.	MligTC455_07087	753	15.69	Mlig455_033003, Mlig455_044987, Mlig455_044989, Mlig455_052687	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.952		0.952	0.952	-	-	-	-	-	Mlig455_033003 {REF} {Length: 253} {NoTransDecoderORF} {RNA1509_51459} {RNA1310_59944} {RNA815_10907} Mlig455_044987 {REF} {Length: 249} {NoTransDecoderORF} {RNA1509_51459} {RNA1310_59944, RNA1509_51459} {RNA1509_51459, RNA815_10907} Mlig455_044989 {REF} {Length: 239} {NoTransDecoderORF} {RNA1509_51459} {RNA1310_59944} {RNA815_10907} Mlig455_052687 {REF} {Length: 243} {NoTransDecoderORF} {RNA1509_51459} {RNA1310_59944} {RNA815_10907}
12.	MligTC455_18291	173	3.6	Mlig455_011831	Neo: - Age: -	MEIG1	0.952	0.952	-	-	-	-	-	Mlig455_011831 {REF} {Length: 1149} {Pfam: Meiosis-expressed [PF15163.8, score=127.4]} {Human: ENSG00000197889, MEIG1, meiosis/spermiogenesis associated 1, [RH, Score=101, Expect=3e-29]} {Mouse: ENSMUSG00000026650, Meig1, meiosis expressed gene 1, [RH, Score=98.2, Expect=3e-28]} {Smed: dd_Smed_v6_4620_0_1, dd_Smed_v6_4620_0_1, [RH, Score=112, Expect=2e-34]} {RNA1509_47514} {RNA1310_45574} {RNA815_22417}
13.	MligTC455_30779	140	2.92	Mlig455_061630	Neo: - Age: -	LRIG2	0.952	0.952	-	-	-	-	-	Mlig455_061630 {REF} {Length: 6435} {Pfam: Leucine rich repeat [PF13855.8, score=97.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=39.2]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=37.9]} {Human: ENSG00000198799, LRIG2, leucine rich repeats and immunoglobulin like domains 2, [Score=57.4, Expect=2e-07]; ENSG00000255690, TRIL, TLR4 interactor with leucine rich repeats, [Score=55.1, Expect=9e-07]} {Mouse: ENSMUSG00000043496, Tril, TLR4 interactor with leucine-rich repeats, [Score=59.7, Expect=3e-08]} {Dmel: FBgn0004364, 18w, 18 wheeler, [Score=77.0, Expect=1e-13]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=75.9, Expect=2e-13]} {RNA1509_37294} {RNA1310_1523.2} {RNA815_1519}
14.	MligTC455_33995	174	3.63	Mlig455_042151	Neo: - Age: logFC(26M/2M)=-0.705	ANK1	0.952	0.952	-	-	-	-	-	Mlig455_042151 {REF} {Length: 8174} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=414.4]; Ankyrin repeats (many copies) [PF13637.8, score=253.9]; Ankyrin repeats (many copies) [PF13857.8, score=156.9]; Ankyrin repeat [PF13606.8, score=149.6]; Ankyrin repeat [PF00023.32, score=87.1]; Family of unknown function (DUF6189) [PF19688.1, score=71.1]; 3,4-dihydroxy-2-butanone 4-phosphate synthase [PF00926.21, score=44.8]; Domain of unknown function (DUF6487) [PF20097.1, score=28.5]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=81.6, Expect=1e-14]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=71.6, Expect=9e-12]; ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=68.2, Expect=9e-11]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=65.5, Expect=4e-10]} {RNA1509_28890} {RNA1310_16696.1, RNA1509_28890} {RNA1509_28890, RNA815_12859.1}
15.	MligTC455_20089	751	15.64	Mlig455_002088	Neo: - Age: -		0.951	0.951	-	-	-	-	-	Mlig455_002088 {REF} {Length: 1181} {Pfam: Domain of unknown function (DUF4570) [PF15134.8, score=52.3]} {Smed: dd_Smed_v6_13889_0_1, dd_Smed_v6_13889_0_1, [RH, Score=87.8, Expect=8e-21]} {RNA1509_56785} {RNA1310_23624} {RNA815_15856.1}
16.	MligTC455_20447	411	8.57	Mlig455_017759	Neo: - Age: -	SLC2A3	0.951	-	-	-	-	0.951	-	Mlig455_017759 {REF} {Length: 2994} {Pfam: Sugar (and other) transporter [PF00083.26, score=369.0]; Major Facilitator Superfamily [PF07690.18, score=71.5]} {Human: ENSG00000059804, SLC2A3, solute carrier family 2 member 3, [RH, Score=349, Expect=1e-114]; ENSG00000117394, SLC2A1, solute carrier family 2 member 1, [RH, Score=345, Expect=3e-113]; ENSG00000173262, SLC2A14, solute carrier family 2 member 14, [RH, Score=342, Expect=9e-112]} {Mouse: ENSMUSG00000028645, Slc2a1, solute carrier family 2 (facilitated glucose transporter), member 1, [RH, Score=343, Expect=1e-112]} {Dmel: FBgn0264574, Glut1, Glucose transporter 1, [RH, Score=409, Expect=1e-136]} {Celegans: WBGene00019207, fgt-1, Facilitated glucose transporter protein 1, [RH, Score=296, Expect=1e-94]} {Smed: dd_Smed_v6_8244_0_1, dd_Smed_v6_8244_0_1, [RH, Score=390, Expect=3e-131]} {RNA1509_33283} {RNA1310_5985.1, RNA1509_33283} {RNA1509_33283, RNA815_5376}
17.	MligTC455_41743	720	15.01	Mlig455_043677	Neo: - Age: -	CERS5	0.95	0.950	-	-	-	-	-	Mlig455_043677 {REF} {Length: 2949} {TRANSSPLICED} {Pfam: TLC domain [PF03798.18, score=142.3]; Homeodomain [PF00046.31, score=28.0]} {Human: ENSG00000139624, CERS5, ceramide synthase 5, [RH, Score=246, Expect=1e-77]; ENSG00000172292, CERS6, ceramide synthase 6, [RH, Score=236, Expect=6e-74]; ENSG00000143418, CERS2, ceramide synthase 2, [RH, Score=236, Expect=3e-74]} {Mouse: ENSMUSG00000023021, Cers5, ceramide synthase 5, [RH, Score=267, Expect=1e-85]} {Dmel: FBgn0040918, schlank, [RH, Score=224, Expect=2e-69]} {Celegans: WBGene00002043, hyl-1, Ceramide synthase hyl-1, [RH, Score=161, Expect=1e-46]} {Smed: dd_Smed_v6_4223_0_1, dd_Smed_v6_4223_0_1, [RH, Score=232, Expect=2e-73]} {RNA1509_46469} {RNA1310_13424.1} {RNA815_10078.1}
18.	MligTC455_43307	242	5.04	Mlig455_061239	Neo: - Age: -		0.95	0.950	-	-	-	-	-	Mlig455_061239 {REF} {Length: 792} {NoTransDecoderORF} {RNA1509_38062} {RNA1310_36873} {RNA815_8442.1}
19.	MligTC455_52885	834	17.37	Mlig455_005944	Neo: - Age: logFC(26M/2M)=0.846	AGRN	0.95	0.950	-	-	-	-	-	Mlig455_005944 {REF} {Length: 1532} {Pfam: Kazal-type serine protease inhibitor domain [PF00050.23, score=108.9]; Kazal-type serine protease inhibitor domain [PF07648.17, score=95.1]} {Human: ENSG00000188157, AGRN, agrin, [Score=55.8, Expect=3e-08]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=50.4, Expect=1e-06]} {Dmel: FBgn0052354, CG32354, [Score=50.1, Expect=1e-06]} {Celegans: WBGene00009257, F29G6.1, [Score=60.8, Expect=3e-10]} {RNA1509_43736} {RNA1310_25866.3, RNA1509_43736} {RNA1509_43736, RNA815_10610.1}

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