TomoSeq data search

Data search

Results for MligTC455_20115

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_20115	3156	65.75	Mlig455_013288, Mlig455_035933	Neo: - Age: -	CDH7	Mlig455_013288 {REF} {Length: 1147} {Pfam: Cadherin domain [PF00028.19, score=75.0]} {Human: ENSG00000081138, CDH7, cadherin 7, [Score=86.7, Expect=1e-18]; ENSG00000138650, PCDH10, protocadherin 10, [Score=84.3, Expect=7e-18]; ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=84.3, Expect=9e-18]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=84.3, Expect=9e-18]} {Mouse: ENSMUSG00000055333, Fat2, FAT atypical cadherin 2, [Score=86.7, Expect=1e-18]; ENSMUSG00000026312, Cdh7, cadherin 7, type 2, [Score=86.7, Expect=9e-19]; ENSMUSG00000102692, Dchs2, dachsous cadherin related 2, [Score=85.1, Expect=3e-18]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=84.7, Expect=4e-18]; ENSMUSG00000049100, Pcdh10, protocadherin 10, [Score=84.3, Expect=5e-18]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=82.4, Expect=3e-17]} {Dmel: FBgn0001075, ft, fat, [Score=78.6, Expect=4e-16]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=62.0, Expect=1e-10]} {Smed: dd_Smed_v6_13155_0_1, dd_Smed_v6_13155_0_1, [Score=80.9, Expect=3e-17]} {RNA1509_10914, RNA1509_9301} {RNA1310_820, RNA1509_10914} {RNA1509_10914, RNA815_14374} Mlig455_035933 {REF} {Length: 1255} {Pfam: Cadherin domain [PF00028.19, score=75.4]} {Human: ENSG00000081138, CDH7, cadherin 7, [Score=87.8, Expect=3e-19]} {Mouse: ENSMUSG00000026312, Cdh7, cadherin 7, type 2, [Score=87.4, Expect=3e-19]; ENSMUSG00000055333, Fat2, FAT atypical cadherin 2, [Score=86.3, Expect=8e-19]; ENSMUSG00000102692, Dchs2, dachsous cadherin related 2, [Score=86.3, Expect=9e-19]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=84.0, Expect=5e-18]} {Dmel: FBgn0001075, ft, fat, [Score=79.7, Expect=1e-16]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=62.0, Expect=9e-11]} {Smed: dd_Smed_v6_11223_0_1, dd_Smed_v6_11223_0_1, [Score=79.3, Expect=6e-17]} {RNA1509_9301} {RNA1310_820} {RNA815_14374}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20115

3156

65.75

Mlig455_013288, Mlig455_035933

Neo: -

Age: -

CDH7

Mlig455_013288 {REF} {Length: 1147} {Pfam: Cadherin domain [PF00028.19, score=75.0]} {Human: ENSG00000081138, CDH7, cadherin 7, [Score=86.7, Expect=1e-18]; ENSG00000138650, PCDH10, protocadherin 10, [Score=84.3, Expect=7e-18]; ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=84.3, Expect=9e-18]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=84.3, Expect=9e-18]} {Mouse: ENSMUSG00000055333, Fat2, FAT atypical cadherin 2, [Score=86.7, Expect=1e-18]; ENSMUSG00000026312, Cdh7, cadherin 7, type 2, [Score=86.7, Expect=9e-19]; ENSMUSG00000102692, Dchs2, dachsous cadherin related 2, [Score=85.1, Expect=3e-18]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=84.7, Expect=4e-18]; ENSMUSG00000049100, Pcdh10, protocadherin 10, [Score=84.3, Expect=5e-18]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=82.4, Expect=3e-17]} {Dmel: FBgn0001075, ft, fat, [Score=78.6, Expect=4e-16]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=62.0, Expect=1e-10]} {Smed: dd_Smed_v6_13155_0_1, dd_Smed_v6_13155_0_1, [Score=80.9, Expect=3e-17]} {RNA1509_10914, RNA1509_9301} {RNA1310_820, RNA1509_10914} {RNA1509_10914, RNA815_14374}

Mlig455_035933 {REF} {Length: 1255} {Pfam: Cadherin domain [PF00028.19, score=75.4]} {Human: ENSG00000081138, CDH7, cadherin 7, [Score=87.8, Expect=3e-19]} {Mouse: ENSMUSG00000026312, Cdh7, cadherin 7, type 2, [Score=87.4, Expect=3e-19]; ENSMUSG00000055333, Fat2, FAT atypical cadherin 2, [Score=86.3, Expect=8e-19]; ENSMUSG00000102692, Dchs2, dachsous cadherin related 2, [Score=86.3, Expect=9e-19]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=84.0, Expect=5e-18]} {Dmel: FBgn0001075, ft, fat, [Score=79.7, Expect=1e-16]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=62.0, Expect=9e-11]} {Smed: dd_Smed_v6_11223_0_1, dd_Smed_v6_11223_0_1, [Score=79.3, Expect=6e-17]} {RNA1509_9301} {RNA1310_820} {RNA815_14374}

Cumulative graph for MligTC455_20115

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.821	6.162	0.03081	0.44815
RegionR2	1	6.162	0.12167	0.43180
RegionR3	0.463	6.162	0.40382	0.93147
RegionR4	0.917	6.162	0.17098	0.43485
RegionR5	-0.021	6.162	0.97487	1.00000
RegionR6	1.366	6.162	0.00996	0.16784
RegionR7	-0.102	6.162	0.87463	1.00000
RegionR8	-0.801	6.162	0.28421	0.91121

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.341	6.162	0.01731	0.54429
RegenerationR2	0.394	6.162	0.56159	0.89957
RegenerationR3	1.16	6.162	0.09703	0.49906
RegenerationR4	0.456	6.162	0.53277	0.88519
RegenerationR5	0.923	6.162	0.17473	0.60397
RegenerationR6	0.275	6.162	0.68488	0.91669
RegenerationBL	-0.503	6.162	0.44147	0.80829
RegenerationTP	1.083	6.162	0.12495	0.53552

Genes with expression patterns similar to MligTC455_20115

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20115	3156	65.75	Mlig455_013288, Mlig455_035933	Neo: - Age: -	CDH7	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013288 {REF} {Length: 1147} {Pfam: Cadherin domain [PF00028.19, score=75.0]} {Human: ENSG00000081138, CDH7, cadherin 7, [Score=86.7, Expect=1e-18]; ENSG00000138650, PCDH10, protocadherin 10, [Score=84.3, Expect=7e-18]; ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=84.3, Expect=9e-18]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=84.3, Expect=9e-18]} {Mouse: ENSMUSG00000055333, Fat2, FAT atypical cadherin 2, [Score=86.7, Expect=1e-18]; ENSMUSG00000026312, Cdh7, cadherin 7, type 2, [Score=86.7, Expect=9e-19]; ENSMUSG00000102692, Dchs2, dachsous cadherin related 2, [Score=85.1, Expect=3e-18]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=84.7, Expect=4e-18]; ENSMUSG00000049100, Pcdh10, protocadherin 10, [Score=84.3, Expect=5e-18]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=82.4, Expect=3e-17]} {Dmel: FBgn0001075, ft, fat, [Score=78.6, Expect=4e-16]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=62.0, Expect=1e-10]} {Smed: dd_Smed_v6_13155_0_1, dd_Smed_v6_13155_0_1, [Score=80.9, Expect=3e-17]} {RNA1509_10914, RNA1509_9301} {RNA1310_820, RNA1509_10914} {RNA1509_10914, RNA815_14374} Mlig455_035933 {REF} {Length: 1255} {Pfam: Cadherin domain [PF00028.19, score=75.4]} {Human: ENSG00000081138, CDH7, cadherin 7, [Score=87.8, Expect=3e-19]} {Mouse: ENSMUSG00000026312, Cdh7, cadherin 7, type 2, [Score=87.4, Expect=3e-19]; ENSMUSG00000055333, Fat2, FAT atypical cadherin 2, [Score=86.3, Expect=8e-19]; ENSMUSG00000102692, Dchs2, dachsous cadherin related 2, [Score=86.3, Expect=9e-19]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=84.0, Expect=5e-18]} {Dmel: FBgn0001075, ft, fat, [Score=79.7, Expect=1e-16]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=62.0, Expect=9e-11]} {Smed: dd_Smed_v6_11223_0_1, dd_Smed_v6_11223_0_1, [Score=79.3, Expect=6e-17]} {RNA1509_9301} {RNA1310_820} {RNA815_14374}
2.	MligTC455_35415	2569	53.52	Mlig455_040549, Mlig455_062089	Neo: - Age: - Region-enriched R2: 1.828/0.00030 Region-enriched R6: 1.548/0.00050	SPON1	3.629	0.917	-	0.832	0.968	0.912	-	Mlig455_040549 {REF} {Length: 3554} {Pfam: Spondin_N [PF06468.15, score=172.2]; Kunitz/Bovine pancreatic trypsin inhibitor domain [PF00014.25, score=92.5]; Spondin-like TSP1 domain [PF19028.2, score=86.2]; Thrombospondin type 1 domain [PF00090.21, score=43.5]; Reeler domain [PF02014.18, score=33.7]} {Human: ENSG00000262655, SPON1, spondin 1, [RH, Score=221, Expect=5e-60]} {Mouse: ENSMUSG00000038156, Spon1, spondin 1, (f-spondin) extracellular matrix protein, [RH, Score=224, Expect=3e-61]} {Dmel: FBgn0026721, fat-spondin, [RH, Score=219, Expect=7e-60]} {Celegans: WBGene00006893, spon-1, SPONdin (Extracellular matrix glycoprotein) family, [RH, Score=236, Expect=1e-65]} {Smed: dd_Smed_v6_2400_0_1, dd_Smed_v6_2400_0_1, [RH, Score=376, Expect=7e-117]} {RNA1509_12151, RNA1509_34516, RNA1509_4778} {RNA1310_4115.1, RNA1509_12151, RNA1509_34516, RNA1509_4778} {RNA1509_12151, RNA1509_34516, RNA1509_4778, RNA815_2374} Mlig455_062089 {REF} {Length: 3332} {Pfam: Spondin_N [PF06468.15, score=172.9]; Kunitz/Bovine pancreatic trypsin inhibitor domain [PF00014.25, score=103.7]; Spondin-like TSP1 domain [PF19028.2, score=85.5]; Thrombospondin type 1 domain [PF00090.21, score=47.2]; Reeler domain [PF02014.18, score=34.0]} {Human: ENSG00000262655, SPON1, spondin 1, [RH, Score=221, Expect=1e-59]} {Mouse: ENSMUSG00000038156, Spon1, spondin 1, (f-spondin) extracellular matrix protein, [RH, Score=223, Expect=8e-61]} {Dmel: FBgn0026721, fat-spondin, [RH, Score=217, Expect=4e-59]} {Celegans: WBGene00006893, spon-1, SPONdin (Extracellular matrix glycoprotein) family, [RH, Score=236, Expect=3e-65]} {Smed: dd_Smed_v6_2400_0_1, dd_Smed_v6_2400_0_1, [RH, Score=375, Expect=8e-116]} {RNA1509_12151, RNA1509_45559} {RNA1310_4115.1, RNA1509_45559} {RNA1509_45559, RNA815_2374}
3.	MligTC455_18470	514	10.71	Mlig455_043915	Neo: - Age: -		3.296	0.766	-	-	0.726	0.834	0.970	Mlig455_043915 {REF} {Length: 1376} {RNA1509_15794, RNA1509_31295, RNA1509_46879, RNA1509_48240} {RNA1310_29921.1, RNA1509_15794, RNA1509_31295, RNA1509_46879, RNA1509_48240} {RNA1509_15794, RNA1509_31295, RNA1509_46879, RNA1509_48240, RNA815_24315}
4.	MligTC455_13318	468	9.76	Mlig455_037659	Neo: - Age: -		1.824	-	-	0.870	-	0.954	-	Mlig455_037659 {REF} {Length: 2609} {Smed: dd_Smed_v6_20776_0_1, dd_Smed_v6_20776_0_1, [RH, Score=85.5, Expect=1e-17]} {RNA1509_12918, RNA1509_42831} {RNA1310_7526.1, RNA1509_42831} {RNA1509_42831, RNA815_9598.1}
5.	MligTC455_35098	101	2.11	Mlig455_018035	Neo: - Age: -		0.958	-	-	0.958	-	-	-	Mlig455_018035 {REF} {Length: 2099} {RNA1310_24485.1} {RNA815_11038}
6.	MligTC455_27221	207	4.31	Mlig455_024263	Neo: - Age: -	HELZ2	0.956	0.956	-	-	-	-	-	Mlig455_024263 {REF} {Length: 8150} {TRANSSPLICED} {Pfam: RNB domain [PF00773.21, score=173.7]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=113, Expect=1e-24]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [Score=108, Expect=4e-23]} {Dmel: FBgn0035111, Dis3l2, Dis3 like 3'-5' exoribonuclease 2, [Score=105, Expect=8e-23]} {Celegans: WBGene00001001, dis-3, Probable exosome complex exonuclease RRP44, [Score=97.8, Expect=2e-20]} {Smed: dd_Smed_v6_8176_0_1, dd_Smed_v6_8176_0_1, [Score=196, Expect=1e-50]} {RNA1509_22258, RNA1509_59433, RNA1509_9494} {RNA1310_368.1, RNA1509_22258, RNA1509_59433} {RNA1509_22258, RNA1509_59433, RNA815_2963.1}
7.	MligTC455_27222	167	3.48	Mlig455_051573	Neo: - Age: Down-Up-Down		0.955	0.955	-	-	-	-	-	Mlig455_051573 {REF} {Length: 1704} {Pfam: Lipoprotein leucine-zipper [PF04728.15, score=20.5]; Nucleopolyhedrovirus P10 protein [PF05531.14, score=20.3]} {RNA1509_22258, RNA1509_52099} {RNA1310_79414, RNA1509_52099} {RNA1509_52099, RNA815_45381}