M. lignano Tomo-Seq
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Results for MligTC455_20181

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20181 82 1.71 Mlig455_003175

Neo: -

Age: -

 Mlig455_003175 {REF} {Length: 263} {NoTransDecoderORF} {RNA1509_49615}

Cumulative graph for MligTC455_20181

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.209 1.549 0.99995 1.00000
RegionR2 1.367 1.549 1.00000 1.00000
RegionR3 1.479 1.549 0.99992 1.00000
RegionR4 0.027 1.549 0.99992 1.00000
RegionR5 1.419 1.549 0.99987 1.00000
RegionR6 1.391 1.549 0.99994 1.00000
RegionR7 0.227 1.549 1.00000 1.00000
RegionR8 -1.7 1.549 0.99989 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.148 1.549 1.00000 1.00000
RegenerationR2 5.699 1.549 0.01278 0.18385
RegenerationR3 5.156 1.549 0.07067 0.44518
RegenerationR4 3.708 1.549 0.14147 0.56386
RegenerationR5 4.749 1.549 0.03900 0.32564
RegenerationR6 5.377 1.549 0.06380 0.31722
RegenerationBL 5.446 1.549 0.02877 0.18844
RegenerationTP 5.703 1.549 0.08978 0.47170


Genes with expression patterns similar to MligTC455_20181

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20181 82 1.71 Mlig455_003175

Neo: -

Age: -

 3 - - - 1.000 1.000 1.000 Mlig455_003175 {REF} {Length: 263} {NoTransDecoderORF} {RNA1509_49615}
2. MligTC455_57390 157 3.26 Mlig455_040521

Neo: -

Age: -

 1.715 - - - - 0.762 0.953 Mlig455_040521 {REF} {Length: 293} {NoTransDecoderORF}
3. MligTC455_00892 28 0.59 Mlig455_025905

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_025905 {REF} {Length: 994} {NoTransDecoderORF} {RNA1509_33187} {RNA1310_15716.1} {RNA815_44681}
4. MligTC455_40594 171 3.55 Mlig455_006568

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_006568 {REF} {Length: 1824} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13277} {RNA1310_51098} {RNA815_47536}
5. MligTC455_54222 114 2.38 Mlig455_055360, Mlig455_055418

Neo: -

Age: -

Regeneration-enriched TP: 9.881
Regeneration-enriched R3: 8.972
Regeneration-enriched R5: 6.734
Regeneration-enriched R2: 6.390
Regeneration-enriched R6: 5.942

 MCU 0.97 - - - - 0.970 -

Mlig455_055360 {REF} {Length: 2517} {TRANSSPLICED} {Pfam: Mitochondrial calcium uniporter [PF04678.15, score=202.5]; MerR, DNA binding [PF09278.13, score=20.5]} {Human: ENSG00000156026, MCU, mitochondrial calcium uniporter, [RH, Score=248, Expect=4e-81]} {Mouse: ENSMUSG00000009647, Mcu, mitochondrial calcium uniporter, [RH, Score=251, Expect=1e-81]} {Dmel: FBgn0042185, MCU, Mitochondrial calcium uniporter, [RH, Score=256, Expect=2e-82]} {Celegans: WBGene00019296, mcu-1, Calcium uniporter protein, mitochondrial, [RH, Score=228, Expect=5e-73]} {Smed: dd_Smed_v6_4033_0_1, dd_Smed_v6_4033_0_1, [RH, Score=258, Expect=2e-85]} {RNA1509_35363} {RNA1310_16831, RNA1509_35363} {RNA1509_35363, RNA815_13813}

Mlig455_055418 {REF} {Length: 2505} {TRANSSPLICED} {Pfam: Mitochondrial calcium uniporter [PF04678.15, score=202.5]; MerR, DNA binding [PF09278.13, score=20.5]} {Human: ENSG00000156026, MCU, mitochondrial calcium uniporter, [RH, Score=248, Expect=4e-81]} {Mouse: ENSMUSG00000009647, Mcu, mitochondrial calcium uniporter, [RH, Score=251, Expect=1e-81]} {Dmel: FBgn0042185, MCU, Mitochondrial calcium uniporter, [RH, Score=256, Expect=2e-82]} {Celegans: WBGene00019296, mcu-1, Calcium uniporter protein, mitochondrial, [RH, Score=228, Expect=5e-73]} {Smed: dd_Smed_v6_4033_0_1, dd_Smed_v6_4033_0_1, [RH, Score=258, Expect=2e-85]} {RNA1509_35363} {RNA1310_16831} {RNA815_13813}
6. MligTC455_05581 42 0.87 Mlig455_005887

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_005887 {REF} {Length: 906} {NoTransDecoderORF}
7. MligTC455_12958 55 1.15 Mlig455_055683

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_055683 {REF} {Length: 1376}
8. MligTC455_21464 18 0.37 Mlig455_057821

Neo: -

Age: -

Regeneration-enriched R3: 7.884
Regeneration-enriched R4: 7.555
Regeneration-enriched R2: 5.214

 0.961 - - - - - 0.961 Mlig455_057821 {REF} {Length: 312} {RNA1509_6194} {RNA1310_1675.2} {RNA815_2266}
9. MligTC455_08052 24 0.51 Mlig455_053894

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_053894 {REF} {Length: 693} {NoTransDecoderORF} {RNA1509_53934} {RNA1310_52963} {RNA815_43290}
10. MligTC455_38112 144 3 Mlig455_035800, Mlig455_068307

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.078

 0.955 - - - - - 0.955

Mlig455_035800 {REF} {Length: 440} {NoTransDecoderORF}

Mlig455_068307 {REF} {Length: 195} {NoTransDecoderORF}
11. MligTC455_34952 124 2.59 Mlig455_012890

Neo: -

Age: Up-Down-Down

Region-enriched R7: 3.857/0.02491

 ANGPTL7 0.951 - - - - - 0.951 Mlig455_012890 {REF} {Length: 1624} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=123.8]} {Human: ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=102, Expect=1e-24]; ENSG00000120332, TNN, tenascin N, [Score=101, Expect=3e-23]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=98.2, Expect=2e-22]} {Mouse: ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=100, Expect=4e-24]; ENSMUSG00000026725, Tnn, tenascin N, [Score=97.4, Expect=4e-22]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=97.1, Expect=2e-22]} {Dmel: FBgn0034160, CG5550, [Score=107, Expect=2e-27]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=108, Expect=2e-26]} {RNA1509_54507} {RNA1310_26965} {RNA815_12335}
12. MligTC455_00996 14 0.3 Mlig455_002222, Mlig455_035063

Neo: -

Age: -

 0.95 - - - - 0.950 -

Mlig455_002222 {REF} {Length: 391} {NoTransDecoderORF} {RNA1509_3168} {RNA1310_10013}

Mlig455_035063 {REF} {Length: 348} {NoTransDecoderORF} {RNA1509_3168} {RNA1310_10013}
13. MligTC455_12006 34 0.71 Mlig455_019929

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_019929 {REF} {Length: 483} {NoTransDecoderORF} {RNA1310_116624}

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