Data search


search
Exact
Search

Results for MligTC455_54222

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_54222 114 2.38 Mlig455_055360, Mlig455_055418

Neo: -

Age: -

Regeneration-enriched TP: 9.881
Regeneration-enriched R3: 8.972
Regeneration-enriched R5: 6.734
Regeneration-enriched R2: 6.390
Regeneration-enriched R6: 5.942

MCU

Mlig455_055360 {REF} {Length: 2517} {TRANSSPLICED} {Pfam: Mitochondrial calcium uniporter [PF04678.15, score=202.5]; MerR, DNA binding [PF09278.13, score=20.5]} {Human: ENSG00000156026, MCU, mitochondrial calcium uniporter, [RH, Score=248, Expect=4e-81]} {Mouse: ENSMUSG00000009647, Mcu, mitochondrial calcium uniporter, [RH, Score=251, Expect=1e-81]} {Dmel: FBgn0042185, MCU, Mitochondrial calcium uniporter, [RH, Score=256, Expect=2e-82]} {Celegans: WBGene00019296, mcu-1, Calcium uniporter protein, mitochondrial, [RH, Score=228, Expect=5e-73]} {Smed: dd_Smed_v6_4033_0_1, dd_Smed_v6_4033_0_1, [RH, Score=258, Expect=2e-85]} {RNA1509_35363} {RNA1310_16831, RNA1509_35363} {RNA1509_35363, RNA815_13813}

Mlig455_055418 {REF} {Length: 2505} {TRANSSPLICED} {Pfam: Mitochondrial calcium uniporter [PF04678.15, score=202.5]; MerR, DNA binding [PF09278.13, score=20.5]} {Human: ENSG00000156026, MCU, mitochondrial calcium uniporter, [RH, Score=248, Expect=4e-81]} {Mouse: ENSMUSG00000009647, Mcu, mitochondrial calcium uniporter, [RH, Score=251, Expect=1e-81]} {Dmel: FBgn0042185, MCU, Mitochondrial calcium uniporter, [RH, Score=256, Expect=2e-82]} {Celegans: WBGene00019296, mcu-1, Calcium uniporter protein, mitochondrial, [RH, Score=228, Expect=5e-73]} {Smed: dd_Smed_v6_4033_0_1, dd_Smed_v6_4033_0_1, [RH, Score=258, Expect=2e-85]} {RNA1509_35363} {RNA1310_16831} {RNA815_13813}

Cumulative graph for MligTC455_54222

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.213 1.922 0.99966 1.00000
RegionR2 2.673 1.922 0.22995 0.60236
RegionR3 -0.918 1.922 0.98506 1.00000
RegionR4 0.779 1.922 0.47889 0.80661
RegionR5 -0.209 1.922 0.72499 1.00000
RegionR6 1.913 1.922 0.18586 0.75175
RegionR7 -1.084 1.922 0.99955 1.00000
RegionR8 -0.941 1.922 0.99955 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.117 1.922 0.99992 1.00000
RegenerationR2 6.39 1.922 0.00000 0.00002
RegenerationR3 8.972 1.922 0.00000 0.00005
RegenerationR4 4.525 1.922 0.00105 0.03614
RegenerationR5 6.734 1.922 0.00000 0.00010
RegenerationR6 5.942 1.922 0.00001 0.00247
RegenerationBL 2.05 1.922 0.99965 1.00000
RegenerationTP 9.881 1.922 0.00000 0.00005


Genes with expression patterns similar to MligTC455_54222

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_54222 114 2.38 Mlig455_055360, Mlig455_055418

Neo: -

Age: -

Regeneration-enriched TP: 9.881
Regeneration-enriched R3: 8.972
Regeneration-enriched R5: 6.734
Regeneration-enriched R2: 6.390
Regeneration-enriched R6: 5.942

MCU 4 - 1.000 - 1.000 1.000 1.000

Mlig455_055360 {REF} {Length: 2517} {TRANSSPLICED} {Pfam: Mitochondrial calcium uniporter [PF04678.15, score=202.5]; MerR, DNA binding [PF09278.13, score=20.5]} {Human: ENSG00000156026, MCU, mitochondrial calcium uniporter, [RH, Score=248, Expect=4e-81]} {Mouse: ENSMUSG00000009647, Mcu, mitochondrial calcium uniporter, [RH, Score=251, Expect=1e-81]} {Dmel: FBgn0042185, MCU, Mitochondrial calcium uniporter, [RH, Score=256, Expect=2e-82]} {Celegans: WBGene00019296, mcu-1, Calcium uniporter protein, mitochondrial, [RH, Score=228, Expect=5e-73]} {Smed: dd_Smed_v6_4033_0_1, dd_Smed_v6_4033_0_1, [RH, Score=258, Expect=2e-85]} {RNA1509_35363} {RNA1310_16831, RNA1509_35363} {RNA1509_35363, RNA815_13813}

Mlig455_055418 {REF} {Length: 2505} {TRANSSPLICED} {Pfam: Mitochondrial calcium uniporter [PF04678.15, score=202.5]; MerR, DNA binding [PF09278.13, score=20.5]} {Human: ENSG00000156026, MCU, mitochondrial calcium uniporter, [RH, Score=248, Expect=4e-81]} {Mouse: ENSMUSG00000009647, Mcu, mitochondrial calcium uniporter, [RH, Score=251, Expect=1e-81]} {Dmel: FBgn0042185, MCU, Mitochondrial calcium uniporter, [RH, Score=256, Expect=2e-82]} {Celegans: WBGene00019296, mcu-1, Calcium uniporter protein, mitochondrial, [RH, Score=228, Expect=5e-73]} {Smed: dd_Smed_v6_4033_0_1, dd_Smed_v6_4033_0_1, [RH, Score=258, Expect=2e-85]} {RNA1509_35363} {RNA1310_16831} {RNA815_13813}
2. MligTC455_36737 44 0.91 Mlig455_002583

Neo: -

Age: -

1.751 - - - - 0.962 0.789 Mlig455_002583 {REF} {Length: 1838} {Pfam: Cornifin (SPRR) family [PF02389.17, score=19.7]} {RNA1310_118220}
3. MligTC455_01661 15 0.31 Mlig455_049468

Neo: -

Age: -

0.979 - - - - 0.979 - Mlig455_049468 {REF} {Length: 340} {NoTransDecoderORF}
4. MligTC455_20181 82 1.71 Mlig455_003175

Neo: -

Age: -

0.97 - - - - 0.970 - Mlig455_003175 {REF} {Length: 263} {NoTransDecoderORF} {RNA1509_49615}
5. MligTC455_43567 66 1.37 Mlig455_056612

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.471

0.961 - - - - 0.961 - Mlig455_056612 {REF} {Length: 8881} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=55.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=35.6]; Protein of unknown function (DUF2722) [PF10846.10, score=20.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=18.9]} {Mouse: ENSMUSG00000028530, Jak1, Janus kinase 1, [Score=50.8, Expect=1e-05]} {Dmel: FBgn0024329, Mekk1, [Score=50.4, Expect=1e-05]} {Smed: dd_Smed_v6_5859_0_1, dd_Smed_v6_5859_0_1, [Score=192, Expect=9e-50]} {RNA1509_43267, RNA1509_7758} {RNA1310_10778, RNA1509_43267} {RNA1509_43267, RNA815_8372}
6. MligTC455_00996 14 0.3 Mlig455_002222, Mlig455_035063

Neo: -

Age: -

0.957 - - - - 0.957 -

Mlig455_002222 {REF} {Length: 391} {NoTransDecoderORF} {RNA1509_3168} {RNA1310_10013}

Mlig455_035063 {REF} {Length: 348} {NoTransDecoderORF} {RNA1509_3168} {RNA1310_10013}
7. MligTC455_22397 123 2.55 Mlig455_007094, Mlig455_008909, Mlig455_015478, Mlig455_016547, Mlig455_037908, Mlig455_038997, Mlig455_051315

Neo: -

Age: -

0.953 - - - - - 0.953

Mlig455_007094 {REF} {Length: 1370} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56212} {RNA1310_28962.1} {RNA815_25104.1}

Mlig455_008909 {REF} {Length: 529} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56212} {RNA1310_28962.1} {RNA815_25104.1}

Mlig455_015478 {REF} {Length: 1396} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56212} {RNA1310_28962.1} {RNA815_25104.1}

Mlig455_016547 {REF} {Length: 518} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56212} {RNA1310_28962.1} {RNA815_25104.1}

Mlig455_037908 {REF} {Length: 4536} {RNA1509_32371} {RNA1310_7877} {RNA815_19983}

Mlig455_038997 {REF} {Length: 520} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56212} {RNA1310_28962.1} {RNA815_25104.1}

Mlig455_051315 {REF} {Length: 240} {NoTransDecoderORF} {RNA1509_51049} {RNA1310_28962.1} {RNA815_23816.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA