TomoSeq data search

Data search

Results for MligTC455_20185

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20185

46

0.95

Mlig455_041358

Neo: -

Age: Down-Up-Down

Region-enriched R3: 5.259/0.00102
Region-enriched R6: 4.759/0.04227

Mlig455_041358 {REF} {Length: 1249} {RNA1310_50765} {RNA815_56959}

Cumulative graph for MligTC455_20185

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-8.472	0.951	1.00000	1.00000
RegionR2	3.225	0.951	0.12131	0.43114
RegionR3	5.259	0.951	0.00002	0.00102
RegionR4	2.388	0.951	0.01775	0.09349
RegionR5	-0.266	0.951	1.00000	1.00000
RegionR6	4.759	0.951	0.00115	0.04227
RegionR7	-2.887	0.951	1.00000	1.00000
RegionR8	-4.007	0.951	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.192	0.951	0.99991	1.00000
RegenerationR2	-0.204	0.951	0.86339	1.00000
RegenerationR3	-2.079	0.951	0.14809	0.57606
RegenerationR4	0.222	0.951	0.78765	0.98315
RegenerationR5	1.706	0.951	0.57350	0.89733
RegenerationR6	-3.757	0.951	0.01742	0.16276
RegenerationBL	3.23	0.951	0.43091	0.79886
RegenerationTP	4.871	0.951	0.30265	0.74826

Genes with expression patterns similar to MligTC455_20185

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20185	46	0.95	Mlig455_041358	Neo: - Age: Down-Up-Down Region-enriched R3: 5.259/0.00102 Region-enriched R6: 4.759/0.04227		3	1.000	1.000	-	1.000	-	-	Mlig455_041358 {REF} {Length: 1249} {RNA1310_50765} {RNA815_56959}
2.	MligTC455_38585	271	5.64	Mlig455_049023, Mlig455_051567	Neo: - Age: Down-Up-Down		0.985	-	-	-	0.985	-	-	Mlig455_049023 {REF} {Length: 1479} {RNA1509_39410} {RNA1310_55738} {RNA815_31370.1} Mlig455_051567 {REF} {Length: 1403} {RNA1509_39410} {RNA1310_55738} {RNA815_31370.1}
3.	MligTC455_47130	799	16.64	Mlig455_045674	Neo: - Age: Down-Up-Down Region-enriched R8: 3.665/0.00000 Region-enriched R7: 3.245/0.00000	OVOL1	0.983	-	-	-	0.983	-	-	Mlig455_045674 {REF} {Length: 2321} {Pfam: Zinc-finger double domain [PF13465.8, score=53.3]; Zinc finger, C2H2 type [PF00096.28, score=47.1]; C2H2-type zinc finger [PF13894.8, score=35.2]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [RH, Score=174, Expect=7e-53]} {Mouse: ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=172, Expect=1e-51]} {Dmel: FBgn0003028, ovo, [Score=184, Expect=9e-52]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=187, Expect=1e-57]} {Smed: dd_Smed_v6_12010_0_1, dd_Smed_v6_12010_0_1, [RH, Score=183, Expect=3e-56]} {RNA1509_42049} {RNA1310_21041, RNA1509_42049} {RNA1509_42049, RNA815_8487.1}
4.	MligTC455_47131	1841	38.35	Mlig455_045626, Mlig455_045684	Neo: - Age: Down-Up-Up Region-enriched R8: 3.370/0.00000 Region-enriched R7: 3.254/0.00000	OVOL1	0.982	-	-	-	0.982	-	-	Mlig455_045626 {REF} {Length: 1791} {Pfam: Zinc-finger double domain [PF13465.8, score=54.3]; Zinc finger, C2H2 type [PF00096.28, score=48.2]; C2H2-type zinc finger [PF13894.8, score=31.2]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [Score=172, Expect=2e-52]} {Mouse: ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=169, Expect=1e-51]} {Dmel: FBgn0003028, ovo, [Score=181, Expect=7e-52]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=185, Expect=8e-58]} {Smed: dd_Smed_v6_12010_0_1, dd_Smed_v6_12010_0_1, [RH, Score=182, Expect=8e-57]} {RNA1509_42049} {RNA1310_21041} {RNA815_8487.1} Mlig455_045684 {REF} {Length: 1609} {Pfam: Zinc-finger double domain [PF13465.8, score=53.6]; Zinc finger, C2H2 type [PF00096.28, score=47.2]; C2H2-type zinc finger [PF13894.8, score=35.3]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [RH, Score=174, Expect=7e-53]} {Mouse: ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=172, Expect=1e-51]} {Dmel: FBgn0003028, ovo, [Score=184, Expect=8e-52]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=188, Expect=5e-58]} {Smed: dd_Smed_v6_12010_0_1, dd_Smed_v6_12010_0_1, [RH, Score=183, Expect=2e-56]} {RNA1509_42049} {RNA1310_21041} {RNA815_8487.1}
5.	MligTC455_33794	948	19.75	Mlig455_060591	Neo: - Age: logFC(26M/2M)=-0.355 Region-enriched R8: 2.325/0.02122	CNFN	0.981	-	-	-	0.981	-	-	Mlig455_060591 {REF} {Length: 1665} {Pfam: PLAC8 family [PF04749.19, score=60.7]} {Human: ENSG00000105427, CNFN, cornifelin, [RH, Score=70.9, Expect=2e-16]} {Mouse: ENSMUSG00000063651, Cnfn, cornifelin, [RH, Score=70.9, Expect=2e-16]} {Smed: dd_Smed_v6_3182_0_1, dd_Smed_v6_3182_0_1, [RH, Score=85.1, Expect=3e-22]} {RNA1509_35358, RNA1509_9786} {RNA1310_42064, RNA1509_35358, RNA1509_9786} {RNA1509_35358, RNA1509_9786, RNA815_27081}
6.	MligTC455_47088	3826	79.71	Mlig455_027638	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.552 Region-enriched R8: 6.838/0.00000 Region-enriched R7: 4.443/0.00000	CALML6	0.976	-	-	-	0.976	-	-	Mlig455_027638 {REF} {Length: 788} {Pfam: EF-hand domain pair [PF13499.8, score=77.1]; EF hand [PF00036.34, score=76.3]; EF-hand domain [PF13405.8, score=63.9]; EF hand [PF13202.8, score=54.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=31.3]; EF-hand domain [PF14658.8, score=25.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=23.3]; EF-hand domain pair [PF13833.8, score=21.6]} {Human: ENSG00000169885, CALML6, calmodulin like 6, [Score=53.9, Expect=8e-09]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=52.4, Expect=2e-08]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=50.8, Expect=5e-08]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=50.8, Expect=5e-08]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=50.4, Expect=6e-08]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=48.1, Expect=3e-07]} {Celegans: WBGene00000286, cal-2, CALmodulin related genes; Calmodulin-like protein, [Score=50.4, Expect=5e-08]} {Smed: dd_Smed_v6_299_0_1, dd_Smed_v6_299_0_1, [RH, Score=99.8, Expect=4e-27]} {RNA1509_8844} {RNA1310_30724} {RNA815_14702}
7.	MligTC455_15042	369	7.7	Mlig455_005904	Neo: - Age: Down-Up-Down Region-specific R8: 8.223 Region-enriched R8: 8.355/0.00000 Region-enriched R7: 5.709/0.00000	CRIP1	0.971	-	-	-	0.971	-	-	Mlig455_005904 {REF} {Length: 675} {Pfam: LIM domain [PF00412.24, score=56.3]} {Human: ENSG00000213145, CRIP1, cysteine rich protein 1, [RH, Score=142, Expect=5e-46]; ENSG00000257341, AL928654.3, novel transcript, [RH, Score=142, Expect=5e-46]} {Mouse: ENSMUSG00000006360, Crip1, cysteine-rich protein 1 (intestinal), [RH, Score=141, Expect=4e-45]} {Dmel: FBgn0039055, Rassf, Ras association family member, [Score=102, Expect=7e-27]} {Celegans: WBGene00015216, valv-1, [Score=115, Expect=8e-36]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=57.0, Expect=9e-12]} {RNA1310_46877} {RNA815_34890}
8.	MligTC455_33925	519	10.82	Mlig455_020716, Mlig455_020784	Neo: - Age: Down-Down-Up Region-enriched R8: 6.564/0.00000 Region-enriched R7: 4.314/0.00003		0.971	-	-	-	0.971	-	-	Mlig455_020716 {REF} {Length: 1635} {Pfam: Amastin surface glycoprotein [PF07344.13, score=21.1]} {RNA1310_25321} {RNA815_36976} Mlig455_020784 {REF} {Length: 2274} {Pfam: Amastin surface glycoprotein [PF07344.13, score=22.1]} {RNA1310_25321} {RNA815_36976}
9.	MligTC455_15043	1215	25.31	Mlig455_028582, Mlig455_028601, Mlig455_056913	Neo: - Age: Down-Up-Down Region-enriched R8: 8.125/0.00000 Region-enriched R7: 5.243/0.00010	AL928654.3, CRIP1	0.964	-	-	-	0.964	-	-	Mlig455_028582 {REF} {Length: 547} {Pfam: LIM domain [PF00412.24, score=54.3]; DNA gyrase inhibitor YacG [PF03884.16, score=18.3]} {Human: ENSG00000213145, CRIP1, cysteine rich protein 1, [RH, Score=140, Expect=3e-45]; ENSG00000257341, AL928654.3, novel transcript, [RH, Score=140, Expect=3e-45]} {Mouse: ENSMUSG00000006360, Crip1, cysteine-rich protein 1 (intestinal), [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0039055, Rassf, Ras association family member, [Score=99.4, Expect=5e-26]} {Celegans: WBGene00015216, valv-1, [Score=114, Expect=3e-35]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=54.3, Expect=1e-10]} {RNA1310_46877} {RNA815_34890} Mlig455_028601 {REF} {Length: 1461} {Pfam: LIM domain [PF00412.24, score=56.4]} {Human: ENSG00000213145, CRIP1, cysteine rich protein 1, [RH, Score=124, Expect=5e-39]; ENSG00000257341, AL928654.3, novel transcript, [RH, Score=124, Expect=5e-39]} {Mouse: ENSMUSG00000006360, Crip1, cysteine-rich protein 1 (intestinal), [RH, Score=122, Expect=3e-38]} {Dmel: FBgn0039055, Rassf, Ras association family member, [RH, Score=94.0, Expect=3e-24]} {Celegans: WBGene00015216, valv-1, [RH, Score=101, Expect=2e-30]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=55.8, Expect=2e-11]} {RNA1509_42587} {RNA1310_58649} {RNA815_34890} Mlig455_056913 {REF} {Length: 444} {Pfam: LIM domain [PF00412.24, score=34.9]} {Human: ENSG00000257341, AL928654.3, novel transcript, [Score=103, Expect=6e-30]; ENSG00000213145, CRIP1, cysteine rich protein 1, [Score=103, Expect=6e-30]} {Mouse: ENSMUSG00000006360, Crip1, cysteine-rich protein 1 (intestinal), [Score=103, Expect=1e-29]} {Dmel: FBgn0039055, Rassf, Ras association family member, [Score=77.4, Expect=9e-18]} {Celegans: WBGene00015216, valv-1, [Score=83.6, Expect=2e-22]} {RNA1310_46877} {RNA815_34890}
10.	MligTC455_47087	7707	160.57	Mlig455_027628	Neo: - Age: - Region-specific R8: 7.073 Region-enriched R8: 6.753/0.00000 Region-enriched R7: 4.044/0.00000	CALML6	0.963	-	-	-	0.963	-	-	Mlig455_027628 {REF} {Length: 884} {Pfam: EF hand [PF00036.34, score=82.2]; EF-hand domain pair [PF13499.8, score=79.5]; EF-hand domain [PF13405.8, score=70.1]; EF hand [PF13202.8, score=64.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=31.5]; EF-hand domain [PF14658.8, score=30.6]; EF-hand domain pair [PF13833.8, score=28.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=22.0]} {Human: ENSG00000169885, CALML6, calmodulin like 6, [Score=58.2, Expect=4e-10]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=55.5, Expect=4e-09]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=48.1, Expect=5e-07]} {Celegans: WBGene00000554, cnb-1, Protein phosphatase 2B regulatory subunit cnb-1, [Score=53.9, Expect=4e-09]} {Smed: dd_Smed_v6_5204_0_1, dd_Smed_v6_5204_0_1, [Score=108, Expect=4e-30]} {RNA1509_8844} {RNA1310_30724} {RNA815_14702}
11.	MligTC455_35051	220	4.58	Mlig455_020175	Neo: - Age: Down-Up-Down Region-enriched R8: 5.304/0.00000 Region-enriched R7: 4.092/0.00006	CALM3	0.96	-	-	-	0.960	-	-	Mlig455_020175 {REF} {Length: 927} {Pfam: EF hand [PF00036.34, score=111.3]; EF-hand domain pair [PF13499.8, score=98.6]; EF-hand domain [PF13405.8, score=91.1]; EF-hand domain pair [PF13833.8, score=78.1]; EF hand [PF13202.8, score=76.7]; EF-hand domain [PF14658.8, score=56.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=26.7]; Dockerin type I domain [PF00404.20, score=22.0]; EF-hand domain [PF17959.3, score=21.1]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=146, Expect=5e-45]; ENSG00000198668, CALM1, calmodulin 1, [Score=146, Expect=5e-45]; ENSG00000143933, CALM2, calmodulin 2, [Score=146, Expect=5e-45]; ENSG00000178363, CALML3, calmodulin like 3, [Score=143, Expect=8e-44]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=146, Expect=3e-45]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=146, Expect=3e-45]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=146, Expect=3e-45]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=144, Expect=4e-44]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=148, Expect=8e-46]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=147, Expect=7e-46]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=147, Expect=5e-46]} {RNA1310_46966} {RNA815_26674}
12.	MligTC455_31145	244	5.09	Mlig455_016670, Mlig455_056357	Neo: - Age: - Region-enriched R8: 3.415/0.00478		0.959	-	-	-	0.959	-	-	Mlig455_016670 {REF} {Length: 2972} {RNA1509_46776} {RNA1310_10756} {RNA815_21244} Mlig455_056357 {REF} {Length: 1716} {RNA1509_46776} {RNA1310_10756} {RNA815_21244}
13.	MligTC455_07107	177	3.68	Mlig455_037410	Neo: - Age: - Region-enriched R8: 7.446/0.00923		0.957	-	-	-	0.957	-	-	Mlig455_037410 {REF} {Length: 2565} {RNA1509_34967} {RNA1310_16201, RNA1509_34967} {RNA1509_34967, RNA815_28129}
14.	MligTC455_26605	131	2.74	Mlig455_011826	Neo: - Age: Down-Up-Down	SLC35B2	0.957	-	-	-	0.957	-	-	Mlig455_011826 {REF} {Length: 3784} {Pfam: UAA transporter family [PF08449.13, score=186.8]; Triose-phosphate Transporter family [PF03151.18, score=18.6]} {Human: ENSG00000157593, SLC35B2, solute carrier family 35 member B2, [Score=291, Expect=3e-93]} {Mouse: ENSMUSG00000037089, Slc35b2, solute carrier family 35, member B2, [Score=289, Expect=1e-92]} {Dmel: FBgn0038524, sll, slalom, [Score=282, Expect=1e-89]} {Celegans: WBGene00004206, pst-1, Adenosine 3'-phospho 5'-phosphosulfate transporter 1, [Score=203, Expect=5e-60]} {Smed: dd_Smed_v6_6703_0_1, dd_Smed_v6_6703_0_1, [Score=306, Expect=2e-99]} {RNA1509_29229} {RNA1310_7808} {RNA815_3554}
15.	MligTC455_22230	170	3.54	Mlig455_013703, Mlig455_013720	Neo: - Age: Down-Up-Down Region-enriched R8: 5.137/0.00004 Region-enriched R7: 5.134/0.00000 Region-enriched R6: 3.126/0.00746		0.952	-	-	-	0.952	-	-	Mlig455_013703 {REF} {Length: 2025} {RNA1509_49155} {RNA1310_23836, RNA1509_49155} {RNA1509_49155, RNA815_28676} Mlig455_013720 {REF} {Length: 2031} {RNA1509_49155} {RNA1310_23836} {RNA815_28676}
16.	MligTC455_34472	552	11.5	Mlig455_021887, Mlig455_021964	Neo: - Age: logFC(26M/2M)=-0.244	ODF2	0.952	-	-	-	0.952	-	-	Mlig455_021887 {REF} {Length: 2964} {Human: ENSG00000136811, ODF2, outer dense fiber of sperm tails 2, [RH, Score=103, Expect=3e-22]} {Mouse: ENSMUSG00000026790, Odf2, outer dense fiber of sperm tails 2, [RH, Score=105, Expect=5e-23]} {Smed: dd_Smed_v6_3609_0_1, dd_Smed_v6_3609_0_1, [RH, Score=100, Expect=6e-22]} {RNA1509_22862} {RNA1310_5417.1} {RNA815_16137} Mlig455_021964 {REF} {Length: 2879} {TRANSSPLICED} {Human: ENSG00000136811, ODF2, outer dense fiber of sperm tails 2, [Score=101, Expect=1e-21]} {Mouse: ENSMUSG00000026790, Odf2, outer dense fiber of sperm tails 2, [Score=102, Expect=2e-22]} {Smed: dd_Smed_v6_3609_0_2, dd_Smed_v6_3609_0_2, [RH, Score=166, Expect=5e-44]} {RNA1509_12793} {RNA1310_4923} {RNA815_16137}
17.	MligTC455_42325	270	5.62	Mlig455_016673	Neo: - Age: Down-Up-Up Region-enriched R7: 4.030/0.00009	EVX1	0.951	-	-	-	0.951	-	-	Mlig455_016673 {REF} {Length: 1449} {Pfam: Homeodomain [PF00046.31, score=74.8]} {Human: ENSG00000106038, EVX1, even-skipped homeobox 1, [RH, Score=131, Expect=1e-34]; ENSG00000174279, EVX2, even-skipped homeobox 2, [RH, Score=130, Expect=7e-34]} {Mouse: ENSMUSG00000005503, Evx1, even-skipped homeobox 1, [RH, Score=131, Expect=1e-34]; ENSMUSG00000001815, Evx2, even-skipped homeobox 2, [RH, Score=131, Expect=3e-34]} {Dmel: FBgn0000606, eve, even skipped, [RH, Score=136, Expect=4e-37]} {Celegans: WBGene00006873, vab-7, Homeobox protein vab-7, [RH, Score=110, Expect=3e-28]} {Smed: dd_Smed_v6_18147_0_1, dd_Smed_v6_18147_0_1, [RH, Score=117, Expect=2e-32]} {RNA1509_36832} {RNA1310_42544, RNA1509_36832} {RNA1509_36832, RNA815_33148}

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