TomoSeq data search

Data search

Results for MligTC455_34472

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34472

552

11.50

Mlig455_021887, Mlig455_021964

Neo: -

Age: logFC(26M/2M)=-0.244

ODF2

Mlig455_021887 {REF} {Length: 2964} {Human: ENSG00000136811, ODF2, outer dense fiber of sperm tails 2, [RH, Score=103, Expect=3e-22]} {Mouse: ENSMUSG00000026790, Odf2, outer dense fiber of sperm tails 2, [RH, Score=105, Expect=5e-23]} {Smed: dd_Smed_v6_3609_0_1, dd_Smed_v6_3609_0_1, [RH, Score=100, Expect=6e-22]} {RNA1509_22862} {RNA1310_5417.1} {RNA815_16137}

Mlig455_021964 {REF} {Length: 2879} {TRANSSPLICED} {Human: ENSG00000136811, ODF2, outer dense fiber of sperm tails 2, [Score=101, Expect=1e-21]} {Mouse: ENSMUSG00000026790, Odf2, outer dense fiber of sperm tails 2, [Score=102, Expect=2e-22]} {Smed: dd_Smed_v6_3609_0_2, dd_Smed_v6_3609_0_2, [RH, Score=166, Expect=5e-44]} {RNA1509_12793} {RNA1310_4923} {RNA815_16137}

Cumulative graph for MligTC455_34472

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.964	3.658	0.40300	1.00000
RegionR2	0.991	3.658	0.06554	0.31028
RegionR3	0.542	3.658	0.23279	0.77493
RegionR4	-0.373	3.658	0.48023	0.80802
RegionR5	-0.462	3.658	0.30018	0.63555
RegionR6	0.074	3.658	0.87150	1.00000
RegionR7	-0.634	3.658	0.29871	0.93348
RegionR8	0.826	3.658	0.15459	0.71211

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.251	3.658	0.88919	1.00000
RegenerationR2	-0.674	3.658	0.17867	0.62074
RegenerationR3	-0.161	3.658	0.76428	0.96932
RegenerationR4	0.006	3.658	0.99179	1.00000
RegenerationR5	0.144	3.658	0.79006	0.98544
RegenerationR6	-1.504	3.658	0.01773	0.16439
RegenerationBL	-0.673	3.658	0.32134	0.68817
RegenerationTP	0.618	3.658	0.31432	0.75930

Genes with expression patterns similar to MligTC455_34472

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34472	552	11.5	Mlig455_021887, Mlig455_021964	Neo: - Age: logFC(26M/2M)=-0.244	ODF2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021887 {REF} {Length: 2964} {Human: ENSG00000136811, ODF2, outer dense fiber of sperm tails 2, [RH, Score=103, Expect=3e-22]} {Mouse: ENSMUSG00000026790, Odf2, outer dense fiber of sperm tails 2, [RH, Score=105, Expect=5e-23]} {Smed: dd_Smed_v6_3609_0_1, dd_Smed_v6_3609_0_1, [RH, Score=100, Expect=6e-22]} {RNA1509_22862} {RNA1310_5417.1} {RNA815_16137} Mlig455_021964 {REF} {Length: 2879} {TRANSSPLICED} {Human: ENSG00000136811, ODF2, outer dense fiber of sperm tails 2, [Score=101, Expect=1e-21]} {Mouse: ENSMUSG00000026790, Odf2, outer dense fiber of sperm tails 2, [Score=102, Expect=2e-22]} {Smed: dd_Smed_v6_3609_0_2, dd_Smed_v6_3609_0_2, [RH, Score=166, Expect=5e-44]} {RNA1509_12793} {RNA1310_4923} {RNA815_16137}
2.	MligTC455_49638	799	16.64	Mlig455_013473	Neo: - Age: Down-Up-Down		1.793	-	-	-	0.957	0.836	-	Mlig455_013473 {REF} {Length: 1363} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19889, RNA1509_27962, RNA1509_48033} {RNA1310_36116, RNA1509_19889, RNA1509_27962, RNA1509_48033} {RNA1509_19889, RNA1509_27962, RNA1509_48033, RNA815_19281}
3.	MligTC455_48633	399	8.32	Mlig455_054497	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.353		0.962	-	-	-	-	-	0.962	Mlig455_054497 {REF} {Length: 2714} {Pfam: TIR domain [PF13676.8, score=87.9]; SAM domain (Sterile alpha motif) [PF07647.19, score=27.1]; SAM domain (Sterile alpha motif) [PF00536.32, score=19.5]} {Smed: dd_Smed_v6_12177_0_1, dd_Smed_v6_12177_0_1, [Score=65.9, Expect=7e-11]} {RNA1509_36274} {RNA1310_5526} {RNA815_2549.1}
4.	MligTC455_29862	174	3.61	Mlig455_062426	Neo: - Age: -	ANK1	0.96	-	-	-	0.960	-	-	Mlig455_062426 {REF} {Length: 6270} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=319.8]; Ankyrin repeat [PF00023.32, score=277.3]; Ankyrin repeats (many copies) [PF13857.8, score=206.7]; Ankyrin repeats (many copies) [PF13637.8, score=185.6]; Ankyrin repeat [PF13606.8, score=184.6]; Glutamine amidotransferase domain [PF13537.8, score=50.3]; Mab-21 protein [PF03281.16, score=32.5]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=261, Expect=2e-70]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=249, Expect=9e-67]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=246, Expect=1e-66]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=252, Expect=4e-68]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=231, Expect=5e-63]} {RNA1509_46044} {RNA1310_3906.1, RNA1509_46044} {RNA1509_46044, RNA815_1664.1}
5.	MligTC455_28746	352	7.34	Mlig455_013115	Neo: - Age: -	ITPR1	0.955	-	-	-	-	-	0.955	Mlig455_013115 {REF} {Length: 9824} {Pfam: RIH domain [PF01365.23, score=97.2]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=68.8]; RyR and IP3R Homology associated [PF08454.13, score=66.6]; MIR domain [PF02815.21, score=57.6]; Ion transport protein [PF00520.33, score=17.9]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=229, Expect=5e-59]; ENSG00000096433, ITPR3, inositol 1,4,5-trisphosphate receptor type 3, [Score=224, Expect=1e-57]; ENSG00000123104, ITPR2, inositol 1,4,5-trisphosphate receptor type 2, [Score=219, Expect=5e-56]} {Mouse: ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=227, Expect=9e-59]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=160, Expect=2e-38]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=166, Expect=2e-40]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [RH, Score=3031, Expect=0.0]} {RNA1509_25537, RNA1509_2749} {RNA1310_434.1, RNA1509_25537, RNA1509_2749} {RNA1509_25537, RNA1509_2749, RNA815_101}
6.	MligTC455_27912	213	4.45	Mlig455_046695	Neo: - Age: - Region-enriched R5: 2.074/0.00238		0.954	-	-	-	0.954	-	-	Mlig455_046695 {REF} {Length: 5091} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=50.5]; Myb-like DNA-binding domain [PF13921.8, score=37.9]} {RNA1509_12469, RNA1509_59513} {RNA1310_2585, RNA1509_12469, RNA1509_59513} {RNA1509_12469, RNA1509_59513, RNA815_1912}
7.	MligTC455_20185	46	0.95	Mlig455_041358	Neo: - Age: Down-Up-Down Region-enriched R3: 5.259/0.00102 Region-enriched R6: 4.759/0.04227		0.952	-	-	-	0.952	-	-	Mlig455_041358 {REF} {Length: 1249} {RNA1310_50765} {RNA815_56959}
8.	MligTC455_44311	1790	37.29	Mlig455_021263, Mlig455_021529	Neo: - Age: Up-Up-Up, logFC(26M/2M)=0.828	MYL6B	0.951	-	-	-	0.951	-	-	Mlig455_021263 {REF} {Length: 1412} {Pfam: EF-hand domain [PF13405.8, score=38.7]; EF-hand domain pair [PF13833.8, score=35.9]; EF-hand domain pair [PF13499.8, score=34.2]; EF hand [PF00036.34, score=26.2]} {Human: ENSG00000196465, MYL6B, myosin light chain 6B, [Score=112, Expect=3e-31]; ENSG00000198336, MYL4, myosin light chain 4, [Score=110, Expect=1e-30]; ENSG00000160808, MYL3, myosin light chain 3, [Score=107, Expect=2e-29]} {Mouse: ENSMUSG00000039824, Myl6b, myosin, light polypeptide 6B, [Score=114, Expect=3e-32]; ENSMUSG00000061086, Myl4, myosin, light polypeptide 4, [Score=112, Expect=1e-31]} {Dmel: FBgn0002772, Mlc1, Myosin alkali light chain 1, [RH, Score=116, Expect=1e-33]} {Celegans: WBGene00003371, mlc-3, Myosin, essential light chain, [RH, Score=130, Expect=3e-39]} {Smed: dd_Smed_v6_223_0_1, dd_Smed_v6_223_0_1, [RH, Score=250, Expect=1e-86]} {RNA1509_31843} {RNA1310_24076} {RNA815_5280.1} Mlig455_021529 {REF} {Length: 1530} {Pfam: EF-hand domain [PF13405.8, score=38.7]; EF-hand domain pair [PF13833.8, score=35.9]; EF-hand domain pair [PF13499.8, score=34.2]; EF hand [PF00036.34, score=26.2]} {Human: ENSG00000196465, MYL6B, myosin light chain 6B, [Score=112, Expect=3e-31]; ENSG00000198336, MYL4, myosin light chain 4, [Score=110, Expect=1e-30]; ENSG00000160808, MYL3, myosin light chain 3, [Score=107, Expect=2e-29]} {Mouse: ENSMUSG00000039824, Myl6b, myosin, light polypeptide 6B, [Score=114, Expect=3e-32]; ENSMUSG00000061086, Myl4, myosin, light polypeptide 4, [Score=112, Expect=1e-31]} {Dmel: FBgn0002772, Mlc1, Myosin alkali light chain 1, [RH, Score=116, Expect=1e-33]} {Celegans: WBGene00003371, mlc-3, Myosin, essential light chain, [RH, Score=130, Expect=3e-39]} {Smed: dd_Smed_v6_223_0_1, dd_Smed_v6_223_0_1, [RH, Score=250, Expect=1e-86]} {RNA1509_31843} {RNA1310_24076, RNA1509_31843} {RNA1509_31843, RNA815_5280.1}
9.	MligTC455_52882	325	6.78	Mlig455_018278	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_018278 {REF} {Length: 3774} {TRANSSPLICED} {RNA1509_55279} {RNA1310_9272} {RNA815_18292}

Berezikov Lab - 2020-2021 © ERIBA