Data search
Results for MligTC455_20227
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20227 | 1990 | 41.46 | Mlig455_002507, Mlig455_002662 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.419 Region-enriched R4: 1.369/0.01148 |
XPA | Mlig455_002507 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: XPA protein C-terminus [PF05181.14, score=63.7]; XPA protein N-terminal [PF01286.20, score=33.8]} {Human: ENSG00000136936, XPA, XPA, DNA damage recognition and repair factor, [RH, Score=164, Expect=7e-49]} {Mouse: ENSMUSG00000028329, Xpa, xeroderma pigmentosum, complementation group A, [RH, Score=162, Expect=2e-48]} {Dmel: FBgn0004832, Xpac, Xeroderma pigmentosum group A-like, [RH, Score=180, Expect=3e-55]} {Celegans: WBGene00006963, xpa-1, XPA (Xeroderma pigmentosum comp grp A) related, [RH, Score=138, Expect=1e-39]} {Smed: dd_Smed_v6_1950_0_1, dd_Smed_v6_1950_0_1, [RH, Score=140, Expect=3e-40]} {RNA1509_14407} {RNA1310_28161} {RNA815_15309} Mlig455_002662 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: XPA protein C-terminus [PF05181.14, score=63.7]; XPA protein N-terminal [PF01286.20, score=33.8]} {Human: ENSG00000136936, XPA, XPA, DNA damage recognition and repair factor, [RH, Score=164, Expect=7e-49]} {Mouse: ENSMUSG00000028329, Xpa, xeroderma pigmentosum, complementation group A, [RH, Score=162, Expect=2e-48]} {Dmel: FBgn0004832, Xpac, Xeroderma pigmentosum group A-like, [RH, Score=180, Expect=3e-55]} {Celegans: WBGene00006963, xpa-1, XPA (Xeroderma pigmentosum comp grp A) related, [RH, Score=138, Expect=1e-39]} {Smed: dd_Smed_v6_1950_0_1, dd_Smed_v6_1950_0_1, [RH, Score=140, Expect=3e-40]} {RNA1509_14407, RNA1509_21024} {RNA1310_28161, RNA1509_14407, RNA1509_21024} {RNA1509_14407, RNA1509_21024, RNA815_15309} |
Cumulative graph for MligTC455_20227
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.169 | 5.626 | 0.16374 | 0.78706 | |
| RegionR2 | 0.303 | 5.626 | 0.51519 | 0.89151 | |
| RegionR3 | 0.112 | 5.626 | 0.77140 | 1.00000 | |
| RegionR4 | 1.369 | 5.626 | 0.00113 | 0.01148 | |
| RegionR5 | 0.794 | 5.626 | 0.02348 | 0.10873 | |
| RegionR6 | 0.34 | 5.626 | 0.37435 | 0.95495 | |
| RegionR7 | -0.042 | 5.626 | 0.92386 | 1.00000 | |
| RegionR8 | -1.706 | 5.626 | 0.00667 | 0.14925 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.86 | 5.626 | 0.21947 | 0.95484 | |
| RegenerationR2 | 0.356 | 5.626 | 0.41261 | 0.82211 | |
| RegenerationR3 | 0.731 | 5.626 | 0.11507 | 0.52944 | |
| RegenerationR4 | -0.16 | 5.626 | 0.73531 | 0.96608 | |
| RegenerationR5 | 0.059 | 5.626 | 0.89064 | 1.00000 | |
| RegenerationR6 | 0.605 | 5.626 | 0.18464 | 0.52042 | |
| RegenerationBL | 0.6 | 5.626 | 0.20013 | 0.53865 | |
| RegenerationTP | 1.185 | 5.626 | 0.02324 | 0.25877 |
Genes with expression patterns similar to MligTC455_20227
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20227 | 1990 | 41.46 | Mlig455_002507, Mlig455_002662 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.419 Region-enriched R4: 1.369/0.01148 |
XPA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002507 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: XPA protein C-terminus [PF05181.14, score=63.7]; XPA protein N-terminal [PF01286.20, score=33.8]} {Human: ENSG00000136936, XPA, XPA, DNA damage recognition and repair factor, [RH, Score=164, Expect=7e-49]} {Mouse: ENSMUSG00000028329, Xpa, xeroderma pigmentosum, complementation group A, [RH, Score=162, Expect=2e-48]} {Dmel: FBgn0004832, Xpac, Xeroderma pigmentosum group A-like, [RH, Score=180, Expect=3e-55]} {Celegans: WBGene00006963, xpa-1, XPA (Xeroderma pigmentosum comp grp A) related, [RH, Score=138, Expect=1e-39]} {Smed: dd_Smed_v6_1950_0_1, dd_Smed_v6_1950_0_1, [RH, Score=140, Expect=3e-40]} {RNA1509_14407} {RNA1310_28161} {RNA815_15309} Mlig455_002662 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: XPA protein C-terminus [PF05181.14, score=63.7]; XPA protein N-terminal [PF01286.20, score=33.8]} {Human: ENSG00000136936, XPA, XPA, DNA damage recognition and repair factor, [RH, Score=164, Expect=7e-49]} {Mouse: ENSMUSG00000028329, Xpa, xeroderma pigmentosum, complementation group A, [RH, Score=162, Expect=2e-48]} {Dmel: FBgn0004832, Xpac, Xeroderma pigmentosum group A-like, [RH, Score=180, Expect=3e-55]} {Celegans: WBGene00006963, xpa-1, XPA (Xeroderma pigmentosum comp grp A) related, [RH, Score=138, Expect=1e-39]} {Smed: dd_Smed_v6_1950_0_1, dd_Smed_v6_1950_0_1, [RH, Score=140, Expect=3e-40]} {RNA1509_14407, RNA1509_21024} {RNA1310_28161, RNA1509_14407, RNA1509_21024} {RNA1509_14407, RNA1509_21024, RNA815_15309} |
| 2. | MligTC455_14283 | 1138 | 23.71 | Mlig455_016581 | Neo: Irradiation Age: - Region-enriched R4: 1.657/0.00131 |
2.396 | - | - | - | 0.702 | 0.735 | 0.959 | Mlig455_016581 {REF} {Length: 1964} {TRANSSPLICED} {Smed: dd_Smed_v6_11504_0_1, dd_Smed_v6_11504_0_1, [RH, Score=170, Expect=3e-48]} {RNA1509_13610, RNA1509_4949} {RNA1310_18237, RNA1509_13610, RNA1509_4949} {RNA1509_13610, RNA1509_4949, RNA815_7092} | |
| 3. | MligTC455_51869 | 4778 | 99.53 | Mlig455_048978, Mlig455_067779 | Neo: Int S/G2/M Age: Down-Up-Up |
1.767 | - | - | - | 0.957 | 0.810 | - | Mlig455_048978 {REF} {Length: 1058} {TRANSSPLICED} {Pfam: BCCIP [PF13862.8, score=29.9]; BUD22 [PF09073.12, score=19.7]} {RNA1509_13464, RNA1509_6893} {RNA1310_33345, RNA1509_13464, RNA1509_6893} {RNA1509_13464, RNA1509_6893, RNA815_15735} Mlig455_067779 {REF} {Length: 1067} {TRANSSPLICED} {Pfam: BCCIP [PF13862.8, score=30.7]} {RNA1509_13464} {RNA1310_33345} {RNA815_15735} |
|
| 4. | MligTC455_14284 | 1120 | 23.33 | Mlig455_035596 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.566 Region-enriched R4: 1.689/0.00083 |
UNG | 1.722 | - | - | - | - | 0.771 | 0.951 | Mlig455_035596 {REF} {Length: 2421} {TRANSSPLICED} {Pfam: Uracil DNA glycosylase superfamily [PF03167.21, score=50.6]} {Human: ENSG00000076248, UNG, uracil DNA glycosylase, [Score=168, Expect=1e-48]} {Mouse: ENSMUSG00000029591, Ung, uracil DNA glycosylase, [Score=166, Expect=2e-48]} {Celegans: WBGene00013241, ung-1, Uracil-DNA glycosylase, [Score=127, Expect=6e-34]} {Smed: dd_Smed_v6_1568_0_1, dd_Smed_v6_1568_0_1, [Score=142, Expect=3e-40]} {RNA1509_4949} {RNA1310_18237} {RNA815_7092} |
| 5. | MligTC455_28834 | 768 | 15.99 | Mlig455_025128 | Neo: - Age: - |
GARS | 0.957 | - | - | - | 0.957 | - | - | Mlig455_025128 {REF} {Length: 1771} {Pfam: Anticodon binding domain [PF03129.22, score=52.5]; tRNA synthetase class II core domain (G, H, P, S and T) [PF00587.27, score=44.1]} {Human: ENSG00000106105, GARS, glycyl-tRNA synthetase, [Score=366, Expect=7e-118]} {Mouse: ENSMUSG00000029777, Gars, glycyl-tRNA synthetase, [Score=367, Expect=2e-118]} {Dmel: FBgn0027088, GlyRS, Glycyl-tRNA synthetase, [Score=380, Expect=2e-124]} {Celegans: WBGene00001744, gars-1, Glycine--tRNA ligase, [Score=368, Expect=1e-119]} {Smed: dd_Smed_v6_3958_0_1, dd_Smed_v6_3958_0_1, [Score=359, Expect=3e-117]} {RNA1509_13579} {RNA1310_564} {RNA815_3927} |