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Results for MligTC455_28834

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28834 768 15.99 Mlig455_025128

Neo: -

Age: -

 GARS Mlig455_025128 {REF} {Length: 1771} {Pfam: Anticodon binding domain [PF03129.22, score=52.5]; tRNA synthetase class II core domain (G, H, P, S and T) [PF00587.27, score=44.1]} {Human: ENSG00000106105, GARS, glycyl-tRNA synthetase, [Score=366, Expect=7e-118]} {Mouse: ENSMUSG00000029777, Gars, glycyl-tRNA synthetase, [Score=367, Expect=2e-118]} {Dmel: FBgn0027088, GlyRS, Glycyl-tRNA synthetase, [Score=380, Expect=2e-124]} {Celegans: WBGene00001744, gars-1, Glycine--tRNA ligase, [Score=368, Expect=1e-119]} {Smed: dd_Smed_v6_3958_0_1, dd_Smed_v6_3958_0_1, [Score=359, Expect=3e-117]} {RNA1509_13579} {RNA1310_564} {RNA815_3927}

Cumulative graph for MligTC455_28834

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.615 4.316 0.06254 0.57084
RegionR2 -0.882 4.316 0.09606 0.38029
RegionR3 -0.86 4.316 0.05230 0.40026
RegionR4 0.111 4.316 0.82034 1.00000
RegionR5 0.399 4.316 0.28357 0.61277
RegionR6 -0.606 4.316 0.16459 0.71912
RegionR7 -0.014 4.316 0.97815 1.00000
RegionR8 0.237 4.316 0.72459 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -9.044 4.316 0.00357 0.30201
RegenerationR2 0.465 4.316 0.32941 0.76695
RegenerationR3 0.672 4.316 0.19700 0.63203
RegenerationR4 0.3 4.316 0.57200 0.90236
RegenerationR5 -0.393 4.316 0.40490 0.80193
RegenerationR6 0.951 4.316 0.06365 0.31680
RegenerationBL -0.443 4.316 0.44333 0.81051
RegenerationTP -0.255 4.316 0.68147 1.00000


Genes with expression patterns similar to MligTC455_28834

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28834 768 15.99 Mlig455_025128

Neo: -

Age: -

 GARS 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_025128 {REF} {Length: 1771} {Pfam: Anticodon binding domain [PF03129.22, score=52.5]; tRNA synthetase class II core domain (G, H, P, S and T) [PF00587.27, score=44.1]} {Human: ENSG00000106105, GARS, glycyl-tRNA synthetase, [Score=366, Expect=7e-118]} {Mouse: ENSMUSG00000029777, Gars, glycyl-tRNA synthetase, [Score=367, Expect=2e-118]} {Dmel: FBgn0027088, GlyRS, Glycyl-tRNA synthetase, [Score=380, Expect=2e-124]} {Celegans: WBGene00001744, gars-1, Glycine--tRNA ligase, [Score=368, Expect=1e-119]} {Smed: dd_Smed_v6_3958_0_1, dd_Smed_v6_3958_0_1, [Score=359, Expect=3e-117]} {RNA1509_13579} {RNA1310_564} {RNA815_3927}
2. MligTC455_51318 370 7.71 Mlig455_040327

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.854

Region-enriched R5: 1.980/0.00436

 RAD51C 1.838 - 0.964 - 0.874 - - Mlig455_040327 {REF} {Length: 1394} {Pfam: Rad51 [PF08423.13, score=138.5]; AAA domain [PF13481.8, score=35.5]; KaiC [PF06745.15, score=18.8]} {Human: ENSG00000108384, RAD51C, RAD51 paralog C, [RH, Score=183, Expect=1e-53]} {Mouse: ENSMUSG00000007646, Rad51c, RAD51 paralog C, [RH, Score=181, Expect=4e-53]} {Dmel: FBgn0003482, spn-D, spindle D, [RH, Score=110, Expect=1e-27]} {Celegans: WBGene00004297, rad-51, RAD51 short isoform; RecA/Rad51/Dmc1-like protein, [Score=70.1, Expect=4e-13]} {Smed: dd_Smed_v6_16724_0_2, dd_Smed_v6_16724_0_2, [RH, Score=184, Expect=2e-55]} {RNA1509_27617} {RNA1310_25633.1} {RNA815_20829}
3. MligTC455_32126 504 10.51 Mlig455_002779, Mlig455_066933

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.758/0.00025

 TRIM31 0.975 - 0.975 - - - -

Mlig455_002779 {REF} {Length: 3847} {TRANSSPLICED} {Pfam: zinc finger of C3HC4-type, RING [PF15227.8, score=38.3]; RING-type zinc-finger [PF13445.8, score=36.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=32.8]; Prokaryotic RING finger family 4 [PF14447.8, score=32.3]; Ring finger domain [PF13639.8, score=28.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.8]; zinc-RING finger domain [PF14634.8, score=27.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.5]} {Human: ENSG00000223531, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000204616, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000233573, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000224168, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000225130, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000226402, TRIM31, tripartite motif containing 31, [RH, Score=58.9, Expect=9e-09]; ENSG00000137397, TRIM31, tripartite motif containing 31, [RH, Score=58.2, Expect=2e-08]; ENSG00000224542, TRIM31, tripartite motif containing 31, [RH, Score=57.0, Expect=1e-08]} {Mouse: ENSMUSG00000058063, Trim31, tripartite motif-containing 31, [RH, Score=53.5, Expect=4e-07]} {Dmel: FBgn0036897, CG8786, [Score=53.9, Expect=2e-07]} {Smed: dd_Smed_v6_6290_0_1, dd_Smed_v6_6290_0_1, [Score=50.4, Expect=1e-06]} {RNA1509_21799} {RNA1310_16610, RNA1509_21799} {RNA1509_21799, RNA815_19239}

Mlig455_066933 {REF} {Length: 3550} {TRANSSPLICED} {Pfam: zinc finger of C3HC4-type, RING [PF15227.8, score=38.6]; RING-type zinc-finger [PF13445.8, score=36.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=33.1]; Prokaryotic RING finger family 4 [PF14447.8, score=32.8]; Ring finger domain [PF13639.8, score=29.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.1]; zinc-RING finger domain [PF14634.8, score=27.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.8]} {Human: ENSG00000233573, TRIM31, tripartite motif containing 31, [RH, Score=63.5, Expect=3e-10]; ENSG00000226402, TRIM31, tripartite motif containing 31, [RH, Score=63.5, Expect=3e-10]; ENSG00000224168, TRIM31, tripartite motif containing 31, [RH, Score=63.2, Expect=3e-10]; ENSG00000223531, TRIM31, tripartite motif containing 31, [RH, Score=63.2, Expect=3e-10]; ENSG00000204616, TRIM31, tripartite motif containing 31, [RH, Score=63.2, Expect=3e-10]; ENSG00000225130, TRIM31, tripartite motif containing 31, [RH, Score=63.2, Expect=3e-10]; ENSG00000137397, TRIM31, tripartite motif containing 31, [RH, Score=62.8, Expect=5e-10]; ENSG00000224542, TRIM31, tripartite motif containing 31, [RH, Score=61.2, Expect=5e-10]} {Mouse: ENSMUSG00000058063, Trim31, tripartite motif-containing 31, [RH, Score=53.5, Expect=3e-07]} {Dmel: FBgn0036897, CG8786, [Score=53.5, Expect=2e-07]} {Smed: dd_Smed_v6_6290_0_1, dd_Smed_v6_6290_0_1, [Score=50.4, Expect=1e-06]} {RNA1509_47313, RNA1509_48965} {RNA1310_43552, RNA1509_47313, RNA1509_48965} {RNA1509_47313, RNA1509_48965, RNA815_19239}
4. MligTC455_44334 424 8.82 Mlig455_033154

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_033154 {REF} {Length: 850} {TRANSSPLICED} {RNA1509_58729} {RNA1310_32528} {RNA815_27474}
5. MligTC455_17903 55 1.15 Mlig455_038590

Neo: -

Age: Down-Up-Up

 POLR3K 0.965 - - - - - 0.965 Mlig455_038590 {REF} {Length: 438} {TRANSSPLICED} {Pfam: Transcription factor S-II (TFIIS) [PF01096.20, score=62.5]; RNA polymerases M/15 Kd subunit [PF02150.18, score=27.0]; Nudix N-terminal [PF14803.8, score=18.9]; TFIIB zinc-binding [PF08271.14, score=18.7]} {Human: ENSG00000161980, POLR3K, RNA polymerase III subunit K, [RH, Score=134, Expect=1e-41]} {Mouse: ENSMUSG00000038628, Polr3k, polymerase (RNA) III (DNA directed) polypeptide K, [RH, Score=133, Expect=1e-41]} {Dmel: FBgn0061362, CG33785, [RH, Score=118, Expect=1e-35]} {Celegans: WBGene00022309, rpc-11, DNA-directed RNA polymerase subunit, [RH, Score=123, Expect=8e-38]} {Smed: dd_Smed_v6_5337_0_1, dd_Smed_v6_5337_0_1, [RH, Score=72.4, Expect=7e-18]} {RNA1509_20847} {RNA1310_49768.2} {RNA815_35455.1}
6. MligTC455_35450 523 10.89 Mlig455_060478

Neo: -

Age: -

 0.965 - - - - - 0.965 Mlig455_060478 {REF} {Length: 1403} {Pfam: Endoribonuclease L-PSP [PF01042.23, score=29.9]} {Dmel: FBgn0030336, CG1578, [Score=89.4, Expect=9e-19]} {Smed: dd_Smed_v6_13307_0_1, dd_Smed_v6_13307_0_1, [Score=95.9, Expect=3e-21]} {RNA1509_25405} {RNA1310_11460.1} {RNA815_8423}
7. MligTC455_14971 1058 22.04 Mlig455_064420

Neo: -

Age: Up-Down-Down

Region-enriched R4: 1.104/0.01713

 OTUD6B 0.958 - - - - - 0.958 Mlig455_064420 {REF} {Length: 5720} {Pfam: OTU-like cysteine protease [PF02338.21, score=80.0]; Peptidase C65 Otubain [PF10275.11, score=26.9]} {Human: ENSG00000155100, OTUD6B, OTU domain containing 6B, [RH, Score=120, Expect=3e-31]} {Mouse: ENSMUSG00000040550, Otud6b, OTU domain containing 6B, [RH, Score=124, Expect=2e-32]; ENSMUSG00000051582, Otud6a, OTU domain containing 6A, [RH, Score=120, Expect=3e-31]} {Dmel: FBgn0026738, CG7857, [RH, Score=134, Expect=1e-36]} {Celegans: WBGene00009007, otub-3, OTUBain deubiquitylating protease homolog, [RH, Score=81.6, Expect=2e-17]} {Smed: dd_Smed_v6_12645_0_2, dd_Smed_v6_12645_0_2, [RH, Score=82.4, Expect=5e-18]} {RNA1509_14470, RNA1509_22735, RNA1509_5461, RNA1509_7052} {RNA1310_32929, RNA1509_14470, RNA1509_22735, RNA1509_5461, RNA1509_7052} {RNA1509_14470, RNA1509_22735, RNA1509_5461, RNA1509_7052, RNA815_31130}
8. MligTC455_20227 1990 41.46 Mlig455_002507, Mlig455_002662

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.419

Region-enriched R4: 1.369/0.01148

 XPA 0.957 - - - 0.957 - -

Mlig455_002507 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: XPA protein C-terminus [PF05181.14, score=63.7]; XPA protein N-terminal [PF01286.20, score=33.8]} {Human: ENSG00000136936, XPA, XPA, DNA damage recognition and repair factor, [RH, Score=164, Expect=7e-49]} {Mouse: ENSMUSG00000028329, Xpa, xeroderma pigmentosum, complementation group A, [RH, Score=162, Expect=2e-48]} {Dmel: FBgn0004832, Xpac, Xeroderma pigmentosum group A-like, [RH, Score=180, Expect=3e-55]} {Celegans: WBGene00006963, xpa-1, XPA (Xeroderma pigmentosum comp grp A) related, [RH, Score=138, Expect=1e-39]} {Smed: dd_Smed_v6_1950_0_1, dd_Smed_v6_1950_0_1, [RH, Score=140, Expect=3e-40]} {RNA1509_14407} {RNA1310_28161} {RNA815_15309}

Mlig455_002662 {REF} {Length: 1083} {TRANSSPLICED} {Pfam: XPA protein C-terminus [PF05181.14, score=63.7]; XPA protein N-terminal [PF01286.20, score=33.8]} {Human: ENSG00000136936, XPA, XPA, DNA damage recognition and repair factor, [RH, Score=164, Expect=7e-49]} {Mouse: ENSMUSG00000028329, Xpa, xeroderma pigmentosum, complementation group A, [RH, Score=162, Expect=2e-48]} {Dmel: FBgn0004832, Xpac, Xeroderma pigmentosum group A-like, [RH, Score=180, Expect=3e-55]} {Celegans: WBGene00006963, xpa-1, XPA (Xeroderma pigmentosum comp grp A) related, [RH, Score=138, Expect=1e-39]} {Smed: dd_Smed_v6_1950_0_1, dd_Smed_v6_1950_0_1, [RH, Score=140, Expect=3e-40]} {RNA1509_14407, RNA1509_21024} {RNA1310_28161, RNA1509_14407, RNA1509_21024} {RNA1509_14407, RNA1509_21024, RNA815_15309}
9. MligTC455_51081 100 2.09 Mlig455_029025

Neo: -

Age: -

 THAP2 0.954 - - - - - 0.954 Mlig455_029025 {REF} {Length: 3115} {Pfam: THAP domain [PF05485.14, score=58.0]} {Human: ENSG00000173451, THAP2, THAP domain containing 2, [Score=64.3, Expect=1e-11]} {Mouse: ENSMUSG00000020137, Thap2, THAP domain containing, apoptosis associated protein 2, [Score=65.1, Expect=3e-12]} {RNA1509_46373, RNA1509_47157} {RNA1310_33057, RNA1509_46373, RNA1509_47157} {RNA1509_46373, RNA1509_47157, RNA815_6917.1}
10. MligTC455_32542 516 10.76 Mlig455_019385

Neo: Int S/G2/M

Age: Up-Down-Up, logFC(26M/2M)=-0.516

 0.951 - - - - 0.951 - Mlig455_019385 {REF} {Length: 1355} {TRANSSPLICED} {Pfam: Rhodanese-like domain [PF00581.22, score=36.8]; AAA domain [PF13238.8, score=24.6]; AAA domain [PF13671.8, score=19.4]; AAA domain [PF13401.8, score=19.2]} {Smed: dd_Smed_v6_9563_0_1, dd_Smed_v6_9563_0_1, [RH, Score=218, Expect=9e-67]} {RNA1509_16759} {RNA1310_23272, RNA1509_16759} {RNA1509_16759, RNA815_10766}

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