TomoSeq data search

Data search

Results for MligTC455_20229

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_20229	268	5.58	Mlig455_025947	Neo: - Age: -	BLM	Mlig455_025947 {REF} {Length: 4787} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=68.8]; Helicase conserved C-terminal domain [PF00271.33, score=64.5]; HRDC domain [PF00570.25, score=42.5]; RQC domain [PF09382.12, score=39.4]; RecQ zinc-binding [PF16124.7, score=33.0]; Type III restriction enzyme, res subunit [PF04851.17, score=26.1]} {Human: ENSG00000197299, BLM, Bloom syndrome RecQ like helicase, [Score=525, Expect=1e-163]} {Mouse: ENSMUSG00000030528, Blm, Bloom syndrome, RecQ like helicase, [Score=523, Expect=1e-162]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [Score=533, Expect=6e-166]} {Celegans: WBGene00001865, him-6, Bloom syndrome protein homolog, [RH, Score=465, Expect=2e-145]} {Smed: dd_Smed_v6_10119_0_1, dd_Smed_v6_10119_0_1, [Score=614, Expect=0.0]} {RNA1509_10459} {RNA1310_1433} {RNA815_5612}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20229

268

5.58

Mlig455_025947

Neo: -

Age: -

BLM

Mlig455_025947 {REF} {Length: 4787} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=68.8]; Helicase conserved C-terminal domain [PF00271.33, score=64.5]; HRDC domain [PF00570.25, score=42.5]; RQC domain [PF09382.12, score=39.4]; RecQ zinc-binding [PF16124.7, score=33.0]; Type III restriction enzyme, res subunit [PF04851.17, score=26.1]} {Human: ENSG00000197299, BLM, Bloom syndrome RecQ like helicase, [Score=525, Expect=1e-163]} {Mouse: ENSMUSG00000030528, Blm, Bloom syndrome, RecQ like helicase, [Score=523, Expect=1e-162]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [Score=533, Expect=6e-166]} {Celegans: WBGene00001865, him-6, Bloom syndrome protein homolog, [RH, Score=465, Expect=2e-145]} {Smed: dd_Smed_v6_10119_0_1, dd_Smed_v6_10119_0_1, [Score=614, Expect=0.0]} {RNA1509_10459} {RNA1310_1433} {RNA815_5612}

Cumulative graph for MligTC455_20229

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.453	2.9	0.76581	1.00000
RegionR2	-0.702	2.9	0.33569	0.72758
RegionR3	-0.726	2.9	0.23687	0.77824
RegionR4	0.923	2.9	0.15052	0.40058
RegionR5	0.979	2.9	0.04207	0.16527
RegionR6	0.682	2.9	0.21095	0.78841
RegionR7	-0.858	2.9	0.32220	0.95757
RegionR8	-0.751	2.9	0.46684	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.294	2.9	0.88051	1.00000
RegenerationR2	-0.483	2.9	0.43683	0.83842
RegenerationR3	0.257	2.9	0.70779	0.95077
RegenerationR4	-0.349	2.9	0.57100	0.90196
RegenerationR5	0.274	2.9	0.60661	0.91260
RegenerationR6	-0.163	2.9	0.79101	0.97299
RegenerationBL	0.561	2.9	0.47798	0.84349
RegenerationTP	-0.927	2.9	0.40956	0.83677

Genes with expression patterns similar to MligTC455_20229

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20229	268	5.58	Mlig455_025947	Neo: - Age: -	BLM	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025947 {REF} {Length: 4787} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=68.8]; Helicase conserved C-terminal domain [PF00271.33, score=64.5]; HRDC domain [PF00570.25, score=42.5]; RQC domain [PF09382.12, score=39.4]; RecQ zinc-binding [PF16124.7, score=33.0]; Type III restriction enzyme, res subunit [PF04851.17, score=26.1]} {Human: ENSG00000197299, BLM, Bloom syndrome RecQ like helicase, [Score=525, Expect=1e-163]} {Mouse: ENSMUSG00000030528, Blm, Bloom syndrome, RecQ like helicase, [Score=523, Expect=1e-162]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [Score=533, Expect=6e-166]} {Celegans: WBGene00001865, him-6, Bloom syndrome protein homolog, [RH, Score=465, Expect=2e-145]} {Smed: dd_Smed_v6_10119_0_1, dd_Smed_v6_10119_0_1, [Score=614, Expect=0.0]} {RNA1509_10459} {RNA1310_1433} {RNA815_5612}
2.	MligTC455_31252	894	18.62	Mlig455_016030, Mlig455_054951, Mlig455_054965	Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R5: 1.348/0.03896		0.956	-	-	-	-	-	0.956	Mlig455_016030 {REF} {Length: 7387} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=42.1]} {RNA1509_4327} {RNA1310_538} {RNA815_243.1} Mlig455_054951 {REF} {Length: 7408} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=42.1]} {RNA1509_4327} {RNA1310_538, RNA1509_4327} {RNA1509_4327, RNA815_243.1} Mlig455_054965 {REF} {Length: 8214} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=41.8]} {RNA1509_4327} {RNA1310_538} {RNA815_243.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts