Data search
Results for MligTC455_31252
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31252 | 894 | 18.62 | Mlig455_016030, Mlig455_054951, Mlig455_054965 | Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R5: 1.348/0.03896 |
Mlig455_016030 {REF} {Length: 7387} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=42.1]} {RNA1509_4327} {RNA1310_538} {RNA815_243.1} Mlig455_054951 {REF} {Length: 7408} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=42.1]} {RNA1509_4327} {RNA1310_538, RNA1509_4327} {RNA1509_4327, RNA815_243.1} Mlig455_054965 {REF} {Length: 8214} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=41.8]} {RNA1509_4327} {RNA1310_538} {RNA815_243.1} |
Cumulative graph for MligTC455_31252
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.484 | 4.637 | 0.25444 | 0.90224 | |
| RegionR2 | -0.235 | 4.637 | 0.75079 | 1.00000 | |
| RegionR3 | 0 | 4.637 | 0.99922 | 1.00000 | |
| RegionR4 | 1.343 | 4.637 | 0.05149 | 0.19669 | |
| RegionR5 | 1.348 | 4.637 | 0.00583 | 0.03896 | |
| RegionR6 | 0.557 | 4.637 | 0.31958 | 0.90830 | |
| RegionR7 | -0.65 | 4.637 | 0.30999 | 0.94419 | |
| RegionR8 | -0.879 | 4.637 | 0.24677 | 0.86450 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.745 | 4.637 | 0.24995 | 0.96639 | |
| RegenerationR2 | 0.368 | 4.637 | 0.56586 | 0.90107 | |
| RegenerationR3 | 0.706 | 4.637 | 0.30697 | 0.73752 | |
| RegenerationR4 | -0.062 | 4.637 | 0.93448 | 1.00000 | |
| RegenerationR5 | 0.761 | 4.637 | 0.22836 | 0.66273 | |
| RegenerationR6 | 0.594 | 4.637 | 0.36971 | 0.71262 | |
| RegenerationBL | 0.915 | 4.637 | 0.16115 | 0.48150 | |
| RegenerationTP | -0.971 | 4.637 | 0.27523 | 0.72301 |
Genes with expression patterns similar to MligTC455_31252
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31252 | 894 | 18.62 | Mlig455_016030, Mlig455_054951, Mlig455_054965 | Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R5: 1.348/0.03896 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_016030 {REF} {Length: 7387} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=42.1]} {RNA1509_4327} {RNA1310_538} {RNA815_243.1} Mlig455_054951 {REF} {Length: 7408} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=42.1]} {RNA1509_4327} {RNA1310_538, RNA1509_4327} {RNA1509_4327, RNA815_243.1} Mlig455_054965 {REF} {Length: 8214} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=41.8]} {RNA1509_4327} {RNA1310_538} {RNA815_243.1} |
|
| 2. | MligTC455_19732 | 533 | 11.11 | Mlig455_049987 | Neo: Int S/G2/M Age: Down-Up-Down |
SRP14 | 2.465 | 0.723 | - | - | 0.951 | 0.791 | - | Mlig455_049987 {REF} {Length: 2512} {Pfam: Signal recognition particle 14kD protein [PF02290.17, score=80.9]} {Human: ENSG00000140319, SRP14, signal recognition particle 14, [RH, Score=99.4, Expect=4e-27]} {Mouse: ENSMUSG00000009549, Srp14, signal recognition particle 14, [RH, Score=92.0, Expect=7e-25]} {Dmel: FBgn0038808, Srp14, Signal recognition particle protein 14, [RH, Score=60.8, Expect=9e-13]} {Celegans: WBGene00017799, F25G6.8, Signal recognition particle 14 kDa protein, [RH, Score=65.5, Expect=1e-14]} {Smed: dd_Smed_v6_3653_0_1, dd_Smed_v6_3653_0_1, [RH, Score=112, Expect=4e-33]} {RNA1509_12830, RNA1509_20740, RNA1509_40118} {RNA1310_47278.1, RNA1509_20740, RNA1509_40118} {RNA1509_20740, RNA1509_40118, RNA815_25613} |
| 3. | MligTC455_24403 | 293 | 6.11 | Mlig455_002756 | Neo: Irradiation Age: - |
ATAD2B | 2.45 | 0.747 | - | 0.753 | - | - | 0.950 | Mlig455_002756 {REF} {Length: 5381} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=147.5]; Bromodomain [PF00439.27, score=48.1]; AAA+ lid domain [PF17862.3, score=36.2]; AAA domain (Cdc48 subfamily) [PF07724.16, score=22.9]; AAA ATPase domain [PF13191.8, score=22.0]} {Human: ENSG00000119778, ATAD2B, ATPase family, AAA domain containing 2B, [RH, Score=694, Expect=0.0]} {Mouse: ENSMUSG00000052812, Atad2b, ATPase family, AAA domain containing 2B, [RH, Score=668, Expect=0.0]; ENSMUSG00000116053, Atad2, ATPase family, AAA domain containing 2, [RH, Score=652, Expect=0.0]; ENSMUSG00000022360, Atad2, ATPase family, AAA domain containing 2, [RH, Score=652, Expect=0.0]} {Dmel: FBgn0261014, TER94, [Score=230, Expect=2e-62]} {Celegans: WBGene00008682, lex-1, Tat-binding homolog 7, [RH, Score=513, Expect=5e-160]} {Smed: dd_Smed_v6_8534_0_1, dd_Smed_v6_8534_0_1, [RH, Score=522, Expect=1e-164]} {RNA1509_47976} {RNA1310_2482.1} {RNA815_17171} |
| 4. | MligTC455_27322 | 336 | 7 | Mlig455_010205 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=-0.326 Region-enriched R5: 1.364/0.02539 |
1.804 | - | - | - | - | 0.953 | 0.851 | Mlig455_010205 {REF} {Length: 3139} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=30.2]} {RNA1509_25391} {RNA1310_14948} {RNA815_4608.2} | |
| 5. | MligTC455_51214 | 487 | 10.15 | Mlig455_004556 | Neo: Irradiation Age: Up-Down-Down |
TUT4 | 1.792 | - | - | 0.950 | - | - | 0.842 | Mlig455_004556 {REF} {Length: 6050} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=61.7]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [Score=113, Expect=4e-25]} {Mouse: ENSMUSG00000035248, Tut7, terminal uridylyl transferase 7, [Score=124, Expect=1e-28]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [Score=139, Expect=1e-33]} {RNA1509_33839, RNA1509_58845, RNA1509_7764} {RNA1310_1212.1, RNA1509_33839, RNA1509_58845} {RNA1509_33839, RNA1509_58845, RNA815_8576.1} |
| 6. | MligTC455_50857 | 444 | 9.25 | Mlig455_019848 | Neo: Neoblast Age: - Region-enriched R5: 1.859/0.00000 |
1.725 | - | - | 0.775 | - | - | 0.950 | Mlig455_019848 {REF} {Length: 663} {TRANSSPLICED} {RNA1509_31574} {RNA1310_54335.2, RNA1509_31574} {RNA1509_31574, RNA815_27703.1} | |
| 7. | MligTC455_37487 | 357 | 7.44 | Mlig455_048723 | Neo: Neoblast Age: - Region-enriched R5: 2.818/0.00001 |
AC116366.3 | 1.673 | 0.702 | - | - | - | - | 0.971 | Mlig455_048723 {REF} {Length: 1717} {Pfam: Putative exonuclease SbcCD, C subunit [PF13558.8, score=31.1]; RecF/RecN/SMC N terminal domain [PF02463.21, score=27.9]} {Human: ENSG00000283782, AC116366.3, novel protein, [RH, Score=276, Expect=1e-82]; ENSG00000113522, RAD50, RAD50 double strand break repair protein, [RH, Score=276, Expect=5e-82]} {Mouse: ENSMUSG00000020380, Rad50, RAD50 double strand break repair protein, [Score=278, Expect=7e-83]} {Dmel: FBgn0034728, rad50, [RH, Score=231, Expect=1e-66]} {Celegans: WBGene00004296, rad-50, DNA repair protein rad-50, [RH, Score=158, Expect=7e-42]} {Smed: dd_Smed_v6_11475_0_1, dd_Smed_v6_11475_0_1, [Score=249, Expect=3e-73]} {RNA1509_46929} {RNA1310_1701} {RNA815_40610} |
| 8. | MligTC455_24937 | 381 | 7.93 | Mlig455_002506 | Neo: Germline |
ENPP5 | 0.966 | - | - | - | 0.966 | - | - | Mlig455_002506 {REF} {Length: 2519} {TRANSSPLICED} {Pfam: Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=197.2]; Sulfatase [PF00884.25, score=32.6]} {Human: ENSG00000112796, ENPP5, ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative), [Score=220, Expect=2e-65]; ENSG00000001561, ENPP4, ectonucleotide pyrophosphatase/phosphodiesterase 4, [Score=215, Expect=1e-63]} {Mouse: ENSMUSG00000023961, Enpp4, ectonucleotide pyrophosphatase/phosphodiesterase 4, [Score=213, Expect=7e-63]; ENSMUSG00000023960, Enpp5, ectonucleotide pyrophosphatase/phosphodiesterase 5, [Score=209, Expect=2e-61]} {Celegans: WBGene00007755, C27A7.3, Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.3, [Score=149, Expect=3e-38]} {Smed: dd_Smed_v6_973_0_1, dd_Smed_v6_973_0_1, [RH, Score=290, Expect=2e-92]} {RNA1509_11646} {RNA1310_18120} {RNA815_3546.1} |
| 9. | MligTC455_46874 | 710 | 14.79 | Mlig455_027558 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.389/0.00017 |
IQGAP2 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_027558 {REF} {Length: 6504} {TRANSSPLICED} {Pfam: GTPase-activator protein for Ras-like GTPase [PF00616.21, score=75.4]; RasGAP C-terminus [PF03836.17, score=60.5]; Calponin homology (CH) domain [PF00307.33, score=56.6]; IQ calmodulin-binding motif [PF00612.29, score=29.7]} {Human: ENSG00000145703, IQGAP2, IQ motif containing GTPase activating protein 2, [RH, Score=665, Expect=0.0]} {Mouse: ENSMUSG00000030536, Iqgap1, IQ motif containing GTPase activating protein 1, [RH, Score=489, Expect=3e-145]; ENSMUSG00000021676, Iqgap2, IQ motif containing GTPase activating protein 2, [RH, Score=469, Expect=2e-138]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=63.9, Expect=6e-11]} {Celegans: WBGene00003980, pes-7, Patterned Expression Site, [RH, Score=160, Expect=4e-39]} {Smed: dd_Smed_v6_103369_0_1, dd_Smed_v6_103369_0_1, [RH, Score=56.6, Expect=7e-10]} {RNA1509_11024, RNA1509_7643} {RNA1310_1089.1, RNA1509_11024, RNA1509_7643} {RNA1509_11024, RNA1509_7643, RNA815_3828} |
| 10. | MligTC455_20711 | 445 | 9.26 | Mlig455_068698 | Neo: - Age: Up-Down-Down Region-enriched R4: 1.877/0.04899 |
EPG5 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_068698 {REF} {Length: 10361} {TRANSSPLICED} {Human: ENSG00000152223, EPG5, ectopic P-granules autophagy protein 5 homolog, [RH, Score=543, Expect=7e-156]} {Mouse: ENSMUSG00000116023, Epg5, ectopic P-granules autophagy protein 5 homolog (C. elegans), [RH, Score=542, Expect=6e-156]; ENSMUSG00000039840, Epg5, ectopic P-granules autophagy protein 5 homolog (C. elegans), [RH, Score=542, Expect=6e-156]} {Dmel: FBgn0038651, Epg5, ectopic P-granules autophagy protein 5, [RH, Score=342, Expect=5e-94]} {Celegans: WBGene00016968, epg-5, Ectopic P granules protein 5, [RH, Score=138, Expect=3e-32]} {Smed: dd_Smed_v6_3273_0_1, dd_Smed_v6_3273_0_1, [RH, Score=405, Expect=9e-114]} {RNA1509_3973} {RNA1310_276.1} {RNA815_491} |
| 11. | MligTC455_37235 | 123 | 2.55 | Mlig455_023469, Mlig455_068152 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_023469 {REF} {Length: 2439} {TRANSSPLICED} {RNA1509_36044} {RNA1310_22986} {RNA815_10707} Mlig455_068152 {REF} {Length: 2831} {TRANSSPLICED} {RNA1509_36044, RNA1509_43481} {RNA1310_22986, RNA1509_36044, RNA1509_43481} {RNA1509_36044, RNA1509_43481, RNA815_10707} |
|
| 12. | MligTC455_20229 | 268 | 5.58 | Mlig455_025947 | Neo: - Age: - |
BLM | 0.956 | - | - | - | - | - | 0.956 | Mlig455_025947 {REF} {Length: 4787} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=68.8]; Helicase conserved C-terminal domain [PF00271.33, score=64.5]; HRDC domain [PF00570.25, score=42.5]; RQC domain [PF09382.12, score=39.4]; RecQ zinc-binding [PF16124.7, score=33.0]; Type III restriction enzyme, res subunit [PF04851.17, score=26.1]} {Human: ENSG00000197299, BLM, Bloom syndrome RecQ like helicase, [Score=525, Expect=1e-163]} {Mouse: ENSMUSG00000030528, Blm, Bloom syndrome, RecQ like helicase, [Score=523, Expect=1e-162]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [Score=533, Expect=6e-166]} {Celegans: WBGene00001865, him-6, Bloom syndrome protein homolog, [RH, Score=465, Expect=2e-145]} {Smed: dd_Smed_v6_10119_0_1, dd_Smed_v6_10119_0_1, [Score=614, Expect=0.0]} {RNA1509_10459} {RNA1310_1433} {RNA815_5612} |
| 13. | MligTC455_29608 | 343 | 7.14 | Mlig455_013833 | Neo: - Age: - |
0.956 | - | - | - | 0.956 | - | - | Mlig455_013833 {REF} {Length: 3094} {TRANSSPLICED} {RNA1509_15693, RNA1509_42457} {RNA1310_30603, RNA1509_42457} {RNA1509_42457, RNA815_16223} | |
| 14. | MligTC455_40043 | 769 | 16.02 | Mlig455_017245 | Neo: - |
0.956 | - | - | - | 0.956 | - | - | Mlig455_017245 {REF} {Length: 454} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19225} {RNA1310_80956, RNA1509_19225} {RNA1509_19225, RNA815_19144} | |
| 15. | MligTC455_15941 | 1123 | 23.4 | Mlig455_049917 | Neo: Neoblast, stringent Age: Down-Up-Up Region-enriched R5: 2.129/0.00000 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_049917 {REF} {Length: 702} {TRANSSPLICED} {Pfam: Replication factor A protein 3 [PF08661.13, score=81.0]} {RNA1509_16541, RNA1509_18258} {RNA1310_40327, RNA1509_16541, RNA1509_18258} {RNA1509_16541, RNA1509_18258, RNA815_26601} | |
| 16. | MligTC455_34123 | 200 | 4.18 | Mlig455_064846 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_064846 {REF} {Length: 3316} {TRANSSPLICED} {Pfam: Tetraspanin family [PF00335.22, score=29.6]} {RNA1509_20621, RNA1509_52026} {RNA1310_4019, RNA1509_52026} {RNA1509_52026, RNA815_15497} | |
| 17. | MligTC455_39017 | 222 | 4.63 | Mlig455_033445 | Neo: Int S/G2/M Age: - |
TCEA2 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_033445 {REF} {Length: 1713} {Pfam: Transcription factor S-II (TFIIS), central domain [PF07500.16, score=114.2]; Transcription factor S-II (TFIIS) [PF01096.20, score=70.2]; TFIIS helical bundle-like domain [PF08711.13, score=33.7]} {Human: ENSG00000171703, TCEA2, transcription elongation factor A2, [RH, Score=257, Expect=3e-84]; ENSG00000187735, TCEA1, transcription elongation factor A1, [RH, Score=252, Expect=2e-82]} {Mouse: ENSMUSG00000033813, Tcea1, transcription elongation factor A (SII) 1, [RH, Score=247, Expect=2e-80]; ENSMUSG00000059540, Tcea2, transcription elongation factor A (SII), 2, [RH, Score=244, Expect=2e-79]; ENSMUSG00000001604, Tcea3, transcription elongation factor A (SII), 3, [RH, Score=237, Expect=4e-76]} {Dmel: FBgn0010422, TfIIS, RNA polymerase II elongation factor, [RH, Score=245, Expect=1e-79]} {Celegans: WBGene00012000, T24H10.1, Putative transcription elongation factor S-II, [RH, Score=213, Expect=2e-67]} {Smed: dd_Smed_v6_3176_0_1, dd_Smed_v6_3176_0_1, [RH, Score=251, Expect=5e-82]} {RNA1509_7459} {RNA1310_7696} {RNA815_8604} |
| 18. | MligTC455_45267 | 1159 | 24.14 | Mlig455_018447 | Neo: Int S/G2/M Age: - |
AP1S2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_018447 {REF} {Length: 2234} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=194.8]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=268, Expect=3e-93]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=258, Expect=2e-89]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=268, Expect=2e-93]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=258, Expect=1e-89]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=263, Expect=1e-91]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=259, Expect=7e-90]} {Smed: dd_Smed_v6_9393_0_2, dd_Smed_v6_9393_0_2, [RH, Score=267, Expect=4e-93]} {RNA1509_41633} {RNA1310_26709.1, RNA1509_41633} {RNA1509_41633, RNA815_14963.1} |
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