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Results for MligTC455_20356

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20356 1023 21.30 Mlig455_046881

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.397

Region-enriched R5: 1.335/0.00006

 PEX13 Mlig455_046881 {REF} {Length: 1778} {TRANSSPLICED} {Pfam: Peroxin 13, N-terminal region [PF04088.15, score=58.5]; Variant SH3 domain [PF14604.8, score=31.4]; SH3 domain [PF00018.30, score=24.1]} {Human: ENSG00000162928, PEX13, peroxisomal biogenesis factor 13, [RH, Score=114, Expect=8e-28]} {Mouse: ENSMUSG00000020283, Pex13, peroxisomal biogenesis factor 13, [RH, Score=114, Expect=6e-28]} {Dmel: FBgn0033812, Pex13, Peroxin 13, [Score=62.0, Expect=3e-10]} {Celegans: WBGene00004198, prx-13, Probable peroxisomal membrane protein PEX13, [RH, Score=108, Expect=1e-26]} {Smed: dd_Smed_v6_2249_0_1, dd_Smed_v6_2249_0_1, [RH, Score=85.5, Expect=1e-18]} {RNA1509_25866} {RNA1310_13795} {RNA815_33367}

Cumulative graph for MligTC455_20356

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.509 4.722 0.03883 0.48113
RegionR2 0.794 4.722 0.06691 0.31414
RegionR3 0.189 4.722 0.59553 1.00000
RegionR4 -0.443 4.722 0.28686 0.59638
RegionR5 1.335 4.722 0.00000 0.00006
RegionR6 0.749 4.722 0.02817 0.30836
RegionR7 -0.396 4.722 0.45954 1.00000
RegionR8 0.28 4.722 0.63873 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.985 4.722 0.03559 0.64896
RegenerationR2 0.004 4.722 0.98913 1.00000
RegenerationR3 0.673 4.722 0.05722 0.41085
RegenerationR4 0.861 4.722 0.01397 0.18474
RegenerationR5 0.363 4.722 0.20959 0.64318
RegenerationR6 0.551 4.722 0.10101 0.39374
RegenerationBL -0.027 4.722 0.95546 1.00000
RegenerationTP -0.209 4.722 0.70638 1.00000


Genes with expression patterns similar to MligTC455_20356

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20356 1023 21.3 Mlig455_046881

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.397

Region-enriched R5: 1.335/0.00006

 PEX13 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_046881 {REF} {Length: 1778} {TRANSSPLICED} {Pfam: Peroxin 13, N-terminal region [PF04088.15, score=58.5]; Variant SH3 domain [PF14604.8, score=31.4]; SH3 domain [PF00018.30, score=24.1]} {Human: ENSG00000162928, PEX13, peroxisomal biogenesis factor 13, [RH, Score=114, Expect=8e-28]} {Mouse: ENSMUSG00000020283, Pex13, peroxisomal biogenesis factor 13, [RH, Score=114, Expect=6e-28]} {Dmel: FBgn0033812, Pex13, Peroxin 13, [Score=62.0, Expect=3e-10]} {Celegans: WBGene00004198, prx-13, Probable peroxisomal membrane protein PEX13, [RH, Score=108, Expect=1e-26]} {Smed: dd_Smed_v6_2249_0_1, dd_Smed_v6_2249_0_1, [RH, Score=85.5, Expect=1e-18]} {RNA1509_25866} {RNA1310_13795} {RNA815_33367}
2. MligTC455_49264 360 7.49 Mlig455_025965

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.763/0.00003

 2.445 - - 0.746 - 0.951 0.748 Mlig455_025965 {REF} {Length: 1751} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=19.4]} {RNA1509_59972} {RNA1310_7813} {RNA815_21109}
3. MligTC455_20357 266 5.53 Mlig455_063020

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.127/0.03917

 PEX13 1.735 - - - 0.772 - 0.963 Mlig455_063020 {REF} {Length: 2216} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=29.5]; SH3 domain [PF00018.30, score=20.7]} {Human: ENSG00000162928, PEX13, peroxisomal biogenesis factor 13, [Score=67.0, Expect=9e-12]} {Mouse: ENSMUSG00000020283, Pex13, peroxisomal biogenesis factor 13, [Score=67.4, Expect=4e-12]} {Celegans: WBGene00004198, prx-13, Probable peroxisomal membrane protein PEX13, [Score=69.3, Expect=4e-13]} {RNA1509_25866, RNA1509_36886} {RNA1310_13795, RNA1509_36886} {RNA1509_36886, RNA815_33367}
4. MligTC455_25981 970 20.21 Mlig455_020309

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.666

Region-enriched R5: 2.043/0.00000

 FIGNL1 1.735 - - - - 0.956 0.779 Mlig455_020309 {REF} {Length: 2500} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=125.9]; AAA+ lid domain [PF17862.3, score=34.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=24.7]; Vps4 C terminal oligomerisation domain [PF09336.12, score=21.0]} {Human: ENSG00000132436, FIGNL1, fidgetin like 1, [RH, Score=439, Expect=3e-146]} {Mouse: ENSMUSG00000035455, Fignl1, fidgetin-like 1, [RH, Score=436, Expect=4e-145]} {Dmel: FBgn0031519, Fign, Fidgetin, [RH, Score=320, Expect=4e-102]} {Celegans: WBGene00017981, figl-1, Fidgetin-like protein 1, [RH, Score=338, Expect=2e-108]} {Smed: dd_Smed_v6_14599_0_2, dd_Smed_v6_14599_0_2, [RH, Score=394, Expect=2e-130]} {RNA1509_15082, RNA1509_24009} {RNA1310_15510, RNA1509_15082, RNA1509_24009} {RNA1509_15082, RNA1509_24009, RNA815_18261}
5. MligTC455_23884 1234 25.71 Mlig455_013909, Mlig455_050505

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.354

 1.69 - - - 0.735 - 0.955

Mlig455_013909 {REF} {Length: 999} {TRANSSPLICED} {RNA1509_27549, RNA1509_6154} {RNA1310_41822, RNA1509_27549} {RNA1509_27549, RNA815_26185}

Mlig455_050505 {REF} {Length: 999} {TRANSSPLICED} {RNA1509_6154} {RNA1310_41822} {RNA815_26185}
6. MligTC455_49263 512 10.68 Mlig455_025933

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.311

Region-enriched R5: 1.439/0.00123

 0.96 - - - - 0.960 - Mlig455_025933 {REF} {Length: 2336} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=21.8]} {RNA1509_14753, RNA1509_37242, RNA1509_59972} {RNA1310_7813, RNA1509_14753, RNA1509_37242, RNA1509_59972} {RNA1509_14753, RNA1509_37242, RNA1509_59972, RNA815_11829.1}
7. MligTC455_18894 1132 23.59 Mlig455_021180

Neo: Irradiation

Age: -

 DDX52 0.957 - - - - - 0.957 Mlig455_021180 {REF} {Length: 1746} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=113.8]; Helicase conserved C-terminal domain [PF00271.33, score=87.4]} {Human: ENSG00000278053, DDX52, DExD-box helicase 52, [RH, Score=288, Expect=8e-90]; ENSG00000277594, DDX52, DExD-box helicase 52, [RH, Score=287, Expect=3e-89]} {Mouse: ENSMUSG00000020677, Ddx52, DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, [RH, Score=289, Expect=5e-90]} {Dmel: FBgn0036754, CG5589, [RH, Score=278, Expect=4e-86]} {Celegans: WBGene00011032, R05D11.4, [RH, Score=251, Expect=3e-76]} {Smed: dd_Smed_v6_7870_0_1, dd_Smed_v6_7870_0_1, [RH, Score=245, Expect=3e-75]} {RNA1509_7314} {RNA1310_15587, RNA1509_7314} {RNA1509_7314, RNA815_6774}
8. MligTC455_52060 860 17.92 Mlig455_020170

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.363

 0.957 - - 0.957 - - - Mlig455_020170 {REF} {Length: 1703} {TRANSSPLICED} {Pfam: Mid-1-related chloride channel (MCLC) [PF05934.13, score=24.2]} {RNA1509_45538} {RNA1310_18152, RNA1509_45538} {RNA1509_45538, RNA815_7271}
9. MligTC455_28091 865 18.01 Mlig455_057437, Mlig455_057529

Neo: -

Age: -

 SLC25A1 0.954 - - - - - 0.954

Mlig455_057437 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=220.8]} {Human: ENSG00000100075, SLC25A1, solute carrier family 25 member 1, [RH, Score=392, Expect=4e-137]} {Mouse: ENSMUSG00000003528, Slc25a1, solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1, [RH, Score=395, Expect=1e-138]} {Dmel: FBgn0037912, sea, scheggia, [RH, Score=447, Expect=4e-159]} {Celegans: WBGene00010780, K11H3.3, Putative tricarboxylate transport protein, mitochondrial, [RH, Score=389, Expect=3e-136]} {Smed: dd_Smed_v6_8165_0_1, dd_Smed_v6_8165_0_1, [RH, Score=454, Expect=3e-162]} {RNA1509_58053} {RNA1310_9317} {RNA815_16804}

Mlig455_057529 {REF} {Length: 3062} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=220.8]} {Human: ENSG00000100075, SLC25A1, solute carrier family 25 member 1, [RH, Score=392, Expect=4e-137]} {Mouse: ENSMUSG00000003528, Slc25a1, solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1, [RH, Score=395, Expect=1e-138]} {Dmel: FBgn0037912, sea, scheggia, [RH, Score=447, Expect=4e-159]} {Celegans: WBGene00010780, K11H3.3, Putative tricarboxylate transport protein, mitochondrial, [RH, Score=389, Expect=3e-136]} {Smed: dd_Smed_v6_8165_0_1, dd_Smed_v6_8165_0_1, [RH, Score=454, Expect=3e-162]} {RNA1509_44858, RNA1509_58053} {RNA1310_9317, RNA1509_44858, RNA1509_58053} {RNA1509_44858, RNA1509_58053, RNA815_16804}
10. MligTC455_51151 2217 46.19 Mlig455_020959

Neo: -

Age: -

 OAT 0.953 - - - 0.953 - - Mlig455_020959 {REF} {Length: 2051} {TRANSSPLICED} {Pfam: Aminotransferase class-III [PF00202.23, score=387.3]} {Human: ENSG00000065154, OAT, ornithine aminotransferase, [RH, Score=593, Expect=0.0]} {Mouse: ENSMUSG00000030934, Oat, ornithine aminotransferase, [RH, Score=609, Expect=0.0]} {Dmel: FBgn0022774, Oat, Ornithine aminotransferase precursor, [RH, Score=602, Expect=0.0]} {Celegans: WBGene00015814, oatr-1, Probable ornithine aminotransferase, mitochondrial, [RH, Score=558, Expect=0.0]} {Smed: dd_Smed_v6_1896_0_1, dd_Smed_v6_1896_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_2337} {RNA1310_13076.1} {RNA815_4668}
11. MligTC455_09513 574 11.96 Mlig455_000773

Neo: -

Age: -

Region-enriched R5: 2.245/0.00003

 GAB1 0.952 - - - - - 0.952 Mlig455_000773 {REF} {Length: 2767} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=39.3]} {Human: ENSG00000109458, GAB1, GRB2 associated binding protein 1, [Score=59.7, Expect=5e-09]} {Mouse: ENSMUSG00000031714, Gab1, growth factor receptor bound protein 2-associated protein 1, [Score=58.2, Expect=1e-08]} {RNA1509_18784, RNA1509_39656, RNA1509_41700, RNA1509_53219} {RNA1310_16455.1, RNA1509_18784, RNA1509_39656, RNA1509_41700, RNA1509_53219} {RNA1509_18784, RNA1509_39656, RNA1509_41700, RNA1509_53219, RNA815_11275}
12. MligTC455_18896 1136 23.67 Mlig455_057881

Neo: Irradiation

Age: Down-Up-Up

 DDX52 0.952 - - - - - 0.952 Mlig455_057881 {REF} {Length: 1741} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=115.0]; Helicase conserved C-terminal domain [PF00271.33, score=87.4]} {Human: ENSG00000278053, DDX52, DExD-box helicase 52, [RH, Score=289, Expect=6e-90]; ENSG00000277594, DDX52, DExD-box helicase 52, [RH, Score=288, Expect=2e-89]} {Mouse: ENSMUSG00000020677, Ddx52, DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, [RH, Score=289, Expect=3e-90]} {Dmel: FBgn0036754, CG5589, [RH, Score=278, Expect=5e-86]} {Celegans: WBGene00011032, R05D11.4, [RH, Score=253, Expect=6e-77]} {Smed: dd_Smed_v6_7870_0_1, dd_Smed_v6_7870_0_1, [RH, Score=246, Expect=2e-75]} {RNA1509_7314} {RNA1310_15587} {RNA815_6774}
13. MligTC455_17574 150 3.12 Mlig455_068350

Neo: -

Age: Down-Up-Down

 0.95 - - - - - 0.950 Mlig455_068350 {REF} {Length: 353} {TRANSSPLICED} {Pfam: PET assembly of cytochrome c oxidase, mitochondrial [PF15786.7, score=45.7]} {RNA1509_37276} {RNA1310_21851} {RNA815_12138.1}
14. MligTC455_39190 323 6.72 Mlig455_026588

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.318/0.02368

 FEN1 0.95 - - - - - 0.950 Mlig455_026588 {REF} {Length: 2905} {Pfam: XPG N-terminal domain [PF00752.19, score=105.5]; XPG I-region [PF00867.20, score=101.3]; 5'-3' exonuclease, C-terminal SAM fold [PF01367.22, score=34.7]} {Human: ENSG00000168496, FEN1, flap structure-specific endonuclease 1, [RH, Score=461, Expect=1e-161]} {Mouse: ENSMUSG00000024742, Fen1, flap structure specific endonuclease 1, [RH, Score=476, Expect=1e-167]} {Dmel: FBgn0025832, Fen1, Flap endonuclease 1, [RH, Score=465, Expect=2e-163]} {Celegans: WBGene00000794, crn-1, Flap endonuclease 1, [RH, Score=438, Expect=4e-153]} {Smed: dd_Smed_v6_8206_0_1, dd_Smed_v6_8206_0_1, [RH, Score=469, Expect=2e-165]} {RNA1509_43574, RNA1509_54653} {RNA1310_13213.1, RNA1509_43574, RNA1509_54653} {RNA1509_43574, RNA1509_54653, RNA815_9256}

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