TomoSeq data search

Data search

Results for MligTC455_20375

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_20375	2124	44.26	Mlig455_002525	Neo: - Age: logFC(26M/2M)=-1.167	SLC39A4	Mlig455_002525 {REF} {Length: 2881} {Pfam: ZIP Zinc transporter [PF02535.24, score=146.7]} {Human: ENSG00000285243, SLC39A4, solute carrier family 39 member 4, [RH, Score=167, Expect=9e-45]; ENSG00000147804, SLC39A4, solute carrier family 39 member 4, [RH, Score=166, Expect=2e-44]} {Mouse: ENSMUSG00000063354, Slc39a4, solute carrier family 39 (zinc transporter), member 4, [RH, Score=164, Expect=1e-43]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=143, Expect=7e-37]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_1731_0_2, dd_Smed_v6_1731_0_2, [Score=142, Expect=3e-37]} {RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385} {RNA1310_12268.1, RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385} {RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385, RNA815_4329.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20375

2124

44.26

Mlig455_002525

Neo: -

Age: logFC(26M/2M)=-1.167

SLC39A4

Mlig455_002525 {REF} {Length: 2881} {Pfam: ZIP Zinc transporter [PF02535.24, score=146.7]} {Human: ENSG00000285243, SLC39A4, solute carrier family 39 member 4, [RH, Score=167, Expect=9e-45]; ENSG00000147804, SLC39A4, solute carrier family 39 member 4, [RH, Score=166, Expect=2e-44]} {Mouse: ENSMUSG00000063354, Slc39a4, solute carrier family 39 (zinc transporter), member 4, [RH, Score=164, Expect=1e-43]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=143, Expect=7e-37]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_1731_0_2, dd_Smed_v6_1731_0_2, [Score=142, Expect=3e-37]} {RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385} {RNA1310_12268.1, RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385} {RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385, RNA815_4329.1}

Cumulative graph for MligTC455_20375

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.69	5.562	0.03371	0.46155
RegionR2	0.228	5.562	0.57704	0.93417
RegionR3	0.143	5.562	0.68996	1.00000
RegionR4	0.691	5.562	0.10854	0.32480
RegionR5	-0.231	5.562	0.53350	0.89638
RegionR6	-0.11	5.562	0.76796	1.00000
RegionR7	0.336	5.562	0.39988	1.00000
RegionR8	0.631	5.562	0.15361	0.71028

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.244	5.562	0.83154	1.00000
RegenerationR2	-1.182	5.562	0.00626	0.12670
RegenerationR3	-1.169	5.562	0.00833	0.16650
RegenerationR4	-0.675	5.562	0.13457	0.55337
RegenerationR5	-0.075	5.562	0.86606	1.00000
RegenerationR6	-0.101	5.562	0.82320	0.98819
RegenerationBL	-0.255	5.562	0.53445	0.89387
RegenerationTP	-0.509	5.562	0.25836	0.70603

Genes with expression patterns similar to MligTC455_20375

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20375	2124	44.26	Mlig455_002525	Neo: - Age: logFC(26M/2M)=-1.167	SLC39A4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002525 {REF} {Length: 2881} {Pfam: ZIP Zinc transporter [PF02535.24, score=146.7]} {Human: ENSG00000285243, SLC39A4, solute carrier family 39 member 4, [RH, Score=167, Expect=9e-45]; ENSG00000147804, SLC39A4, solute carrier family 39 member 4, [RH, Score=166, Expect=2e-44]} {Mouse: ENSMUSG00000063354, Slc39a4, solute carrier family 39 (zinc transporter), member 4, [RH, Score=164, Expect=1e-43]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=143, Expect=7e-37]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_1731_0_2, dd_Smed_v6_1731_0_2, [Score=142, Expect=3e-37]} {RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385} {RNA1310_12268.1, RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385} {RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385, RNA815_4329.1}
2.	MligTC455_20376	3581	74.61	Mlig455_002644	Neo: - Age: logFC(26M/2M)=-1.840 Regeneration-depleted R3: -1.933 Regeneration-depleted TP: -1.570 Regeneration-depleted R4: -1.525 Regeneration-depleted R2: -1.494 Regeneration-depleted R6: -1.199	SLC39A4	2.563	-	0.713	-	0.950	0.900	-	Mlig455_002644 {REF} {Length: 2071} {Pfam: ZIP Zinc transporter [PF02535.24, score=146.7]} {Human: ENSG00000285243, SLC39A4, solute carrier family 39 member 4, [RH, Score=167, Expect=9e-45]; ENSG00000147804, SLC39A4, solute carrier family 39 member 4, [RH, Score=166, Expect=2e-44]} {Mouse: ENSMUSG00000063354, Slc39a4, solute carrier family 39 (zinc transporter), member 4, [RH, Score=164, Expect=9e-44]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=143, Expect=8e-37]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_1731_0_2, dd_Smed_v6_1731_0_2, [Score=142, Expect=3e-37]} {RNA1509_3845} {RNA1310_12268.1} {RNA815_4329.1}
3.	MligTC455_41040	2282	47.54	Mlig455_007193, Mlig455_007263	Neo: - Age: Down-Up-Up	SWAP70	0.956	-	-	-	0.956	-	-	Mlig455_007193 {REF} {Length: 2837} {Pfam: PH domain [PF00169.31, score=32.8]} {RNA1509_34094} {RNA1310_5660.1} {RNA815_1368.1} Mlig455_007263 {REF} {Length: 2947} {Pfam: PH domain [PF00169.31, score=32.8]} {Human: ENSG00000133789, SWAP70, switching B cell complex subunit SWAP70, [Score=52.0, Expect=3e-06]} {Mouse: ENSMUSG00000031015, Swap70, SWA-70 protein, [Score=53.1, Expect=7e-07]} {RNA1509_2935} {RNA1310_5660.1} {RNA815_1368.1}
4.	MligTC455_38785	64	1.34	Mlig455_069764	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_069764 {REF} {Length: 749} {NoTransDecoderORF} {RNA1509_50650} {RNA1310_3080.1} {RNA815_1502}