Data search
Results for MligTC455_20376
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20376 | 3581 | 74.61 | Mlig455_002644 | Neo: - Age: logFC(26M/2M)=-1.840 Regeneration-depleted R3: -1.933 |
SLC39A4 | Mlig455_002644 {REF} {Length: 2071} {Pfam: ZIP Zinc transporter [PF02535.24, score=146.7]} {Human: ENSG00000285243, SLC39A4, solute carrier family 39 member 4, [RH, Score=167, Expect=9e-45]; ENSG00000147804, SLC39A4, solute carrier family 39 member 4, [RH, Score=166, Expect=2e-44]} {Mouse: ENSMUSG00000063354, Slc39a4, solute carrier family 39 (zinc transporter), member 4, [RH, Score=164, Expect=9e-44]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=143, Expect=8e-37]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_1731_0_2, dd_Smed_v6_1731_0_2, [Score=142, Expect=3e-37]} {RNA1509_3845} {RNA1310_12268.1} {RNA815_4329.1} |
Cumulative graph for MligTC455_20376
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.562 | 6.319 | 0.00287 | 0.17129 | |
| RegionR2 | -0.609 | 6.319 | 0.01380 | 0.12336 | |
| RegionR3 | -0.099 | 6.319 | 0.63551 | 1.00000 | |
| RegionR4 | 0.775 | 6.319 | 0.00169 | 0.01569 | |
| RegionR5 | -0.167 | 6.319 | 0.42301 | 0.78323 | |
| RegionR6 | 0.238 | 6.319 | 0.25115 | 0.83740 | |
| RegionR7 | 0.557 | 6.319 | 0.01551 | 0.22568 | |
| RegionR8 | 0.868 | 6.319 | 0.00130 | 0.05628 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.6 | 6.319 | 0.45187 | 1.00000 | |
| RegenerationR2 | -1.494 | 6.319 | 0.00000 | 0.00000 | |
| RegenerationR3 | -1.933 | 6.319 | 0.00000 | 0.00000 | |
| RegenerationR4 | -1.525 | 6.319 | 0.00000 | 0.00000 | |
| RegenerationR5 | -0.68 | 6.319 | 0.00558 | 0.13749 | |
| RegenerationR6 | -1.199 | 6.319 | 0.00000 | 0.00070 | |
| RegenerationBL | -0.751 | 6.319 | 0.00180 | 0.03365 | |
| RegenerationTP | -1.57 | 6.319 | 0.00000 | 0.00002 |
Genes with expression patterns similar to MligTC455_20376
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20376 | 3581 | 74.61 | Mlig455_002644 | Neo: - Age: logFC(26M/2M)=-1.840 Regeneration-depleted R3: -1.933 |
SLC39A4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002644 {REF} {Length: 2071} {Pfam: ZIP Zinc transporter [PF02535.24, score=146.7]} {Human: ENSG00000285243, SLC39A4, solute carrier family 39 member 4, [RH, Score=167, Expect=9e-45]; ENSG00000147804, SLC39A4, solute carrier family 39 member 4, [RH, Score=166, Expect=2e-44]} {Mouse: ENSMUSG00000063354, Slc39a4, solute carrier family 39 (zinc transporter), member 4, [RH, Score=164, Expect=9e-44]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=143, Expect=8e-37]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_1731_0_2, dd_Smed_v6_1731_0_2, [Score=142, Expect=3e-37]} {RNA1509_3845} {RNA1310_12268.1} {RNA815_4329.1} |
| 2. | MligTC455_48954 | 316 | 6.59 | Mlig455_000336, Mlig455_067936 | Neo: - Age: - Region-enriched R8: 6.016/0.00000 |
WNT2 | 3.263 | 0.777 | 0.719 | - | 0.810 | 0.957 | - | Mlig455_000336 {REF} {Length: 2268} {Pfam: wnt family [PF00110.21, score=150.7]} {Human: ENSG00000105989, WNT2, Wnt family member 2, [Score=94.4, Expect=1e-20]; ENSG00000162552, WNT4, Wnt family member 4, [Score=92.8, Expect=3e-20]} {Mouse: ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=95.1, Expect=4e-21]; ENSMUSG00000036856, Wnt4, wingless-type MMTV integration site family, member 4, [Score=93.2, Expect=2e-20]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=75.5, Expect=3e-14]} {Celegans: WBGene00000857, cwn-1, [Score=95.5, Expect=2e-21]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [RH, Score=137, Expect=4e-36]} {RNA1509_39977} {RNA1310_11459, RNA1509_39977} {RNA1509_39977, RNA815_18855} Mlig455_067936 {REF} {Length: 2361} {Pfam: wnt family [PF00110.21, score=149.2]} {Human: ENSG00000105989, WNT2, Wnt family member 2, [Score=96.7, Expect=2e-21]; ENSG00000162552, WNT4, Wnt family member 4, [Score=92.0, Expect=6e-20]} {Mouse: ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=97.4, Expect=7e-22]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=75.5, Expect=3e-14]} {Celegans: WBGene00000857, cwn-1, [Score=96.3, Expect=1e-21]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [RH, Score=133, Expect=7e-35]} {RNA1509_39977} {RNA1310_11459} {RNA815_18855} |
| 3. | MligTC455_20375 | 2124 | 44.26 | Mlig455_002525 | Neo: - Age: logFC(26M/2M)=-1.167 |
SLC39A4 | 2.563 | - | 0.713 | - | 0.950 | 0.900 | - | Mlig455_002525 {REF} {Length: 2881} {Pfam: ZIP Zinc transporter [PF02535.24, score=146.7]} {Human: ENSG00000285243, SLC39A4, solute carrier family 39 member 4, [RH, Score=167, Expect=9e-45]; ENSG00000147804, SLC39A4, solute carrier family 39 member 4, [RH, Score=166, Expect=2e-44]} {Mouse: ENSMUSG00000063354, Slc39a4, solute carrier family 39 (zinc transporter), member 4, [RH, Score=164, Expect=1e-43]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=143, Expect=7e-37]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_1731_0_2, dd_Smed_v6_1731_0_2, [Score=142, Expect=3e-37]} {RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385} {RNA1310_12268.1, RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385} {RNA1509_15034, RNA1509_22480, RNA1509_3845, RNA1509_57385, RNA815_4329.1} |
| 4. | MligTC455_21878 | 777 | 16.19 | Mlig455_005870 | Neo: - Age: logFC(26M/2M)=-1.101 |
TRPM1 | 2.548 | - | - | 0.796 | 0.799 | 0.953 | - | Mlig455_005870 {REF} {Length: 5568} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=44.1]; Ankyrin repeats (many copies) [PF13637.8, score=38.2]; Ion transport protein [PF00520.33, score=36.8]; Ankyrin repeats (many copies) [PF13857.8, score=36.7]; Ankyrin repeat [PF13606.8, score=26.0]; Ankyrin repeat [PF00023.32, score=25.0]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=74.7, Expect=8e-13]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=59.7, Expect=2e-08]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=70.1, Expect=1e-11]} {Smed: dd_Smed_v6_17981_0_1, dd_Smed_v6_17981_0_1, [Score=93.6, Expect=7e-19]} {RNA1509_43082, RNA1509_7199} {RNA1310_2221.1, RNA1509_43082, RNA1509_7199} {RNA1509_43082, RNA1509_7199, RNA815_581} |
| 5. | MligTC455_42723 | 666 | 13.88 | Mlig455_069654 | Neo: Irradiation Age: - Region-enriched R7: 2.955/0.00360 Regeneration-upregulated BL: 3.069 Regeneration-enriched BL: 3.069 |
1.81 | - | - | - | 0.855 | 0.955 | - | Mlig455_069654 {REF} {Length: 1471} {RNA1310_30663.1} {RNA815_50207} | |
| 6. | MligTC455_53573 | 220 | 4.58 | Mlig455_033230 | Neo: - Age: logFC(26M/2M)=-0.512 Region-enriched R8: 7.203/0.00000 |
LMNB1 | 1.794 | - | - | - | 0.837 | 0.957 | - | Mlig455_033230 {REF} {Length: 2512} {Pfam: Intermediate filament protein [PF00038.23, score=183.5]; Lamin Tail Domain [PF00932.21, score=45.5]; Septation ring formation regulator, EzrA [PF06160.14, score=24.2]} {Human: ENSG00000113368, LMNB1, lamin B1, [Score=181, Expect=5e-49]; ENSG00000160789, LMNA, lamin A/C, [Score=177, Expect=2e-47]} {Mouse: ENSMUSG00000024590, Lmnb1, lamin B1, [Score=180, Expect=8e-49]; ENSMUSG00000028063, Lmna, lamin A, [Score=172, Expect=8e-46]} {Dmel: FBgn0002525, Lam, Lamin, [RH, Score=201, Expect=2e-56]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [RH, Score=404, Expect=3e-134]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_3449} {RNA1310_9642} {RNA815_3251.1} |
| 7. | MligTC455_53572 | 2350 | 48.96 | Mlig455_010811 | Neo: - Age: Down-Up-Down Region-enriched R8: 7.256/0.00000 |
LMNB1 | 1.782 | - | - | - | 0.824 | 0.958 | - | Mlig455_010811 {REF} {Length: 2584} {Pfam: Intermediate filament protein [PF00038.23, score=182.9]; Lamin Tail Domain [PF00932.21, score=45.3]; Septation ring formation regulator, EzrA [PF06160.14, score=24.8]} {Human: ENSG00000113368, LMNB1, lamin B1, [Score=182, Expect=7e-49]; ENSG00000160789, LMNA, lamin A/C, [Score=177, Expect=6e-47]} {Mouse: ENSMUSG00000024590, Lmnb1, lamin B1, [Score=180, Expect=2e-48]; ENSMUSG00000028063, Lmna, lamin A, [Score=172, Expect=2e-45]} {Dmel: FBgn0002525, Lam, Lamin, [RH, Score=201, Expect=9e-56]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [RH, Score=403, Expect=7e-133]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [RH, Score=578, Expect=0.0]} {RNA1509_3449} {RNA1310_9642} {RNA815_3251.1} |
| 8. | MligTC455_48750 | 3844 | 80.09 | Mlig455_007168 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.187/0.00002 Regeneration-upregulated BL: 1.016 Regeneration-enriched BL: 1.016 |
SERP2 | 1.743 | - | - | - | 0.950 | 0.793 | - | Mlig455_007168 {REF} {Length: 789} {TRANSSPLICED} {Pfam: Ribosome associated membrane protein RAMP4 [PF06624.14, score=90.6]} {Human: ENSG00000151778, SERP2, stress associated endoplasmic reticulum protein family member 2, [Score=81.3, Expect=4e-22]} {Mouse: ENSMUSG00000052584, Serp2, stress-associated endoplasmic reticulum protein family member 2, [Score=81.3, Expect=3e-22]} {Dmel: FBgn0047135, CG32276, [RH, Score=92.4, Expect=9e-27]} {Celegans: WBGene00020374, T09A12.5, [Score=81.3, Expect=2e-22]} {Smed: dd_Smed_v6_304_0_1, dd_Smed_v6_304_0_1, [Score=103, Expect=3e-31]} {RNA1509_11428, RNA1509_17290, RNA1509_20419, RNA1509_28870, RNA1509_7506} {RNA1310_25484.2, RNA1509_11428, RNA1509_17290, RNA1509_20419, RNA1509_28870, RNA1509_7506} {RNA1509_11428, RNA1509_17290, RNA1509_20419, RNA1509_28870, RNA1509_7506, RNA815_21542} |
| 9. | MligTC455_28885 | 254 | 5.3 | Mlig455_044378, Mlig455_047614 | Neo: - Age: - |
1.711 | - | - | - | 0.760 | 0.951 | - | Mlig455_044378 {REF} {Length: 4881} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=142.9]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=382, Expect=2e-111]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2} Mlig455_047614 {REF} {Length: 3468} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=116.0]} {Celegans: WBGene00007723, C25F9.2, [Score=300, Expect=4e-88]} {RNA1509_17816} {RNA1310_2280.1} {RNA815_694.2} |
|
| 10. | MligTC455_19358 | 257 | 5.35 | Mlig455_066132 | Neo: - Age: - Region-enriched R7: 2.720/0.00219 |
1.709 | - | - | - | 0.759 | 0.950 | - | Mlig455_066132 {REF} {Length: 828} {RNA1509_29828} {RNA1310_19258} {RNA815_18075} | |
| 11. | MligTC455_20102 | 307 | 6.39 | Mlig455_022275 | Neo: - Age: - |
EAPP | 0.961 | - | - | - | - | 0.961 | - | Mlig455_022275 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: E2F-associated phosphoprotein [PF10238.11, score=139.4]} {Human: ENSG00000129518, EAPP, E2F associated phosphoprotein, [RH, Score=135, Expect=5e-39]} {Mouse: ENSMUSG00000054302, Eapp, E2F-associated phosphoprotein, [RH, Score=136, Expect=1e-39]} {Celegans: WBGene00018609, F48E8.2, [RH, Score=107, Expect=3e-27]} {Smed: dd_Smed_v6_3350_0_1, dd_Smed_v6_3350_0_1, [RH, Score=90.9, Expect=2e-23]} {RNA1509_35417, RNA1509_39727} {RNA1310_28043.1, RNA1509_35417} {RNA1509_35417, RNA815_23956} |
| 12. | MligTC455_36555 | 40 | 0.84 | Mlig455_027790, Mlig455_063458 | Neo: - Age: - Region-enriched R4: 7.080/0.02387 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_027790 {REF} {Length: 3034} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=20.8]} {RNA1509_20583} {RNA1310_17633} {RNA815_8151} Mlig455_063458 {REF} {Length: 3182} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=20.8]} {RNA1509_20583} {RNA1310_17633} {RNA815_8151} |
|
| 13. | MligTC455_15356 | 22 | 0.45 | Mlig455_002421 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_002421 {REF} {Length: 588} {NoTransDecoderORF} {RNA1509_51125} {RNA1310_30349.2} | |
| 14. | MligTC455_35610 | 492 | 10.24 | Mlig455_067884 | Neo: - Age: - Region-enriched R5: 1.463/0.00105 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_067884 {REF} {Length: 4050} {TRANSSPLICED} {Pfam: RING-type zinc-finger [PF13445.8, score=31.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=29.7]; Ring finger domain [PF13639.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.1]; Prokaryotic RING finger family 4 [PF14447.8, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.6]; zinc-RING finger domain [PF14634.8, score=22.6]} {RNA1509_23091} {RNA1310_4343, RNA1509_23091} {RNA1509_23091, RNA815_2957.1} | |
| 15. | MligTC455_51970 | 10 | 0.21 | Mlig455_058942 | Neo: - Age: Up-Down-Down |
0.953 | - | - | - | - | 0.953 | - | Mlig455_058942 {REF} {Length: 2794} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_33135} {RNA815_39433} | |
| 16. | MligTC455_21716 | 16 | 0.34 | Mlig455_010621 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_010621 {REF} {Length: 1606} {NoTransDecoderORF} {RNA1310_115082} | |
| 17. | MligTC455_24672 | 39 | 0.81 | Mlig455_047708 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_047708 {REF} {Length: 1539} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=32.9]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=26.1]} {Smed: dd_Smed_v6_24805_0_1, dd_Smed_v6_24805_0_1, [Score=150, Expect=2e-41]} {RNA1310_20543} {RNA815_8393} | |
| 18. | MligTC455_09554 | 41 | 0.85 | Mlig455_038807 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_038807 {REF} {Length: 594} {NoTransDecoderORF} {RNA1310_117051} |
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