TomoSeq data search

Data search

Results for MligTC455_20430

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20430

68

1.42

Mlig455_002157

Neo: -

Age: -

TP53BP1

Mlig455_002157 {REF} {Length: 6574} {Human: ENSG00000067369, TP53BP1, tumor protein p53 binding protein 1, [RH, Score=86.3, Expect=3e-16]} {Mouse: ENSMUSG00000043909, Trp53bp1, transformation related protein 53 binding protein 1, [RH, Score=85.9, Expect=2e-16]} {RNA1509_51455} {RNA1310_14436, RNA1509_51455} {RNA1509_51455, RNA815_16236}

Cumulative graph for MligTC455_20430

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.702	1.558	0.65129	1.00000
RegionR2	2.542	1.558	0.04212	0.24006
RegionR3	0.577	1.558	0.49164	0.98996
RegionR4	1.253	1.558	0.22965	0.52215
RegionR5	1.671	1.558	0.07158	0.24201
RegionR6	1.222	1.558	0.25721	0.84345
RegionR7	-3.909	1.558	0.99966	1.00000
RegionR8	-4.057	1.558	0.99989	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.676	1.558	0.57323	1.00000
RegenerationR2	-1.679	1.558	0.05648	0.39054
RegenerationR3	1.567	1.558	0.09341	0.49184
RegenerationR4	0.714	1.558	0.43660	0.83465
RegenerationR5	0.157	1.558	0.81871	0.99404
RegenerationR6	1.048	1.558	0.27201	0.62208
RegenerationBL	3.564	1.558	0.08182	0.33454
RegenerationTP	0.772	1.558	0.99994	1.00000

Genes with expression patterns similar to MligTC455_20430

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20430	68	1.42	Mlig455_002157	Neo: - Age: -	TP53BP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002157 {REF} {Length: 6574} {Human: ENSG00000067369, TP53BP1, tumor protein p53 binding protein 1, [RH, Score=86.3, Expect=3e-16]} {Mouse: ENSMUSG00000043909, Trp53bp1, transformation related protein 53 binding protein 1, [RH, Score=85.9, Expect=2e-16]} {RNA1509_51455} {RNA1310_14436, RNA1509_51455} {RNA1509_51455, RNA815_16236}
2.	MligTC455_20431	57	1.18	Mlig455_002257	Neo: Irradiation Age: -	TP53BP1	3.798	0.951	-	0.871	0.982	-	0.994	Mlig455_002257 {REF} {Length: 7030} {Human: ENSG00000067369, TP53BP1, tumor protein p53 binding protein 1, [RH, Score=89.4, Expect=2e-17]} {Mouse: ENSMUSG00000043909, Trp53bp1, transformation related protein 53 binding protein 1, [RH, Score=87.8, Expect=5e-17]} {RNA1509_39267, RNA1509_51455} {RNA1310_14436, RNA1509_39267} {RNA1509_39267, RNA815_16236}
3.	MligTC455_39307	68	1.43	Mlig455_017513	Neo: Int S/G2/M Age: Down-Up-Up	RYBP	1.861	-	-	-	0.956	-	0.905	Mlig455_017513 {REF} {Length: 2278} {TRANSSPLICED} {Pfam: Yaf2/RYBP C-terminal binding motif [PF17219.5, score=55.1]; Zn-finger in Ran binding protein and others [PF00641.20, score=30.3]} {Human: ENSG00000163602, RYBP, RING1 and YY1 binding protein, [RH, Score=97.1, Expect=2e-23]; ENSG00000281766, RYBP, RING1 and YY1 binding protein, [RH, Score=97.1, Expect=3e-23]} {Mouse: ENSMUSG00000072872, Rybp, RING1 and YY1 binding protein, [RH, Score=98.6, Expect=5e-24]; ENSMUSG00000022634, Yaf2, YY1 associated factor 2, [RH, Score=97.4, Expect=5e-24]} {Dmel: FBgn0034763, RYBP, Ring and YY1 Binding Protein, [RH, Score=99.4, Expect=2e-25]} {Celegans: WBGene00016937, tag-294, [RH, Score=58.5, Expect=2e-09]} {Smed: dd_Smed_v6_13486_0_1, dd_Smed_v6_13486_0_1, [RH, Score=89.4, Expect=5e-21]} {RNA1509_48385} {RNA1310_31208, RNA1509_48385} {RNA1509_48385, RNA815_14350}
4.	MligTC455_38322	256	5.34	Mlig455_056978	Neo: Int S/G2/M Age: - Region-enriched R5: 2.286/0.01138		1.742	-	-	-	0.792	-	0.950	Mlig455_056978 {REF} {Length: 1123} {TRANSSPLICED} {RNA1509_54870} {RNA1310_32129, RNA1509_54870} {RNA1509_54870, RNA815_14647}
5.	MligTC455_02455	121	2.53	Mlig455_049052	Neo: - Age: logFC(26M/2M)=1.049	TNK2	1.694	-	-	-	-	0.743	0.951	Mlig455_049052 {REF} {Length: 3195} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=156.0]; Protein kinase domain [PF00069.27, score=65.1]; P21-Rho-binding domain [PF00786.30, score=26.5]} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [Score=157, Expect=5e-39]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [Score=159, Expect=7e-40]} {Dmel: FBgn0263998, Ack-like, Activated Cdc42 kinase-like, [Score=336, Expect=5e-100]} {Celegans: WBGene00000186, ark-1, Ack-related non-receptor tyrosine kinase, [Score=229, Expect=3e-63]} {Smed: dd_Smed_v6_10115_0_1, dd_Smed_v6_10115_0_1, [Score=182, Expect=1e-47]} {RNA1509_19712} {RNA1310_4760} {RNA815_10643}
6.	MligTC455_23090	110	2.28	Mlig455_010355	Neo: - Age: -		0.975	-	-	-	0.975	-	-	Mlig455_010355 {REF} {Length: 2269} {RNA1509_44577} {RNA1310_44961.1} {RNA815_37684}
7.	MligTC455_35322	22	0.46	Mlig455_038581	Neo: - Age: -		0.962	-	-	-	0.962	-	-	Mlig455_038581 {REF} {Length: 1449} {RNA1310_43348} {RNA815_50885}
8.	MligTC455_18687	156	3.25	Mlig455_061195	Neo: - Age: Down-Down-Up Region-enriched R5: 2.659/0.04682	C9orf78	0.961	-	-	-	-	-	0.961	Mlig455_061195 {REF} {Length: 1320} {TRANSSPLICED} {Pfam: Hepatocellular carcinoma-associated antigen 59 [PF07052.13, score=75.1]} {Human: ENSG00000136819, C9orf78, chromosome 9 open reading frame 78, [RH, Score=80.1, Expect=1e-16]} {Mouse: ENSMUSG00000026851, BC005624, cDNA sequence BC005624, [RH, Score=82.8, Expect=8e-18]} {Dmel: FBgn0035254, CG7974, [RH, Score=90.1, Expect=1e-20]} {Smed: dd_Smed_v6_8171_0_1, dd_Smed_v6_8171_0_1, [RH, Score=89.0, Expect=1e-20]} {RNA1509_42392} {RNA1310_25572} {RNA815_11025}
9.	MligTC455_43251	460	9.59	Mlig455_016660, Mlig455_016727	Neo: - Age: -	MKLN1	0.959	-	-	-	-	-	0.959	Mlig455_016660 {REF} {Length: 3631} {TRANSSPLICED} {Pfam: Muskelin N-terminus [PF06588.13, score=195.6]; Galactose oxidase, central domain [PF13415.8, score=76.5]; Kelch motif [PF13964.8, score=40.9]; Kelch motif [PF01344.27, score=36.8]; Galactose oxidase, central domain [PF13418.8, score=34.8]; Kelch motif [PF13854.8, score=31.7]; Kelch motif [PF07646.17, score=27.0]} {Human: ENSG00000128585, MKLN1, muskelin 1, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0033757, muskelin, [RH, Score=489, Expect=4e-160]} {RNA1509_13339, RNA1509_15922} {RNA1310_3016.1, RNA1509_13339, RNA1509_15922} {RNA1509_13339, RNA1509_15922, RNA815_1486} Mlig455_016727 {REF} {Length: 279} {TRANSSPLICED} {Pfam: Muskelin N-terminus [PF06588.13, score=195.6]; Galactose oxidase, central domain [PF13415.8, score=76.5]; Kelch motif [PF13964.8, score=40.9]; Kelch motif [PF01344.27, score=36.8]; Galactose oxidase, central domain [PF13418.8, score=34.8]; Kelch motif [PF13854.8, score=31.7]; Kelch motif [PF07646.17, score=27.0]} {Human: ENSG00000128585, MKLN1, muskelin 1, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0033757, muskelin, [RH, Score=489, Expect=4e-160]} {RNA1509_15922} {RNA1310_20443} {RNA815_1486}
10.	MligTC455_43250	461	9.6	Mlig455_016728	Neo: - Age: Up-Down-Up	MKLN1	0.958	-	-	-	-	-	0.958	Mlig455_016728 {REF} {Length: 1808} {Human: ENSG00000128585, MKLN1, muskelin 1, [Score=92.4, Expect=3e-20]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=92.8, Expect=2e-22]} {Dmel: FBgn0033757, muskelin, [Score=95.1, Expect=2e-21]} {RNA1509_13339} {RNA1310_3016.1} {RNA815_1486}
11.	MligTC455_49626	298	6.21	Mlig455_048453, Mlig455_062723	Neo: - Age: -	MRPL37	0.957	-	-	-	-	-	0.957	Mlig455_048453 {REF} {Length: 2492} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S30 (PDCD9) [PF07147.14, score=44.0]} {Human: ENSG00000116221, MRPL37, mitochondrial ribosomal protein L37, [RH, Score=116, Expect=6e-28]} {Mouse: ENSMUSG00000028622, Mrpl37, mitochondrial ribosomal protein L37, [RH, Score=103, Expect=1e-23]} {Dmel: FBgn0261380, mRpL37, mitochondrial ribosomal protein L37, [RH, Score=70.9, Expect=5e-13]} {Smed: dd_Smed_v6_7564_0_1, dd_Smed_v6_7564_0_1, [RH, Score=202, Expect=5e-60]} {RNA1509_9957} {RNA1310_18425} {RNA815_6967} Mlig455_062723 {REF} {Length: 2856} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S30 (PDCD9) [PF07147.14, score=43.6]} {Human: ENSG00000116221, MRPL37, mitochondrial ribosomal protein L37, [RH, Score=116, Expect=5e-28]} {Mouse: ENSMUSG00000028622, Mrpl37, mitochondrial ribosomal protein L37, [RH, Score=104, Expect=7e-24]} {Dmel: FBgn0261380, mRpL37, mitochondrial ribosomal protein L37, [RH, Score=70.5, Expect=7e-13]} {Smed: dd_Smed_v6_7564_0_1, dd_Smed_v6_7564_0_1, [RH, Score=201, Expect=1e-59]} {RNA1509_50196, RNA1509_50379, RNA1509_9957} {RNA1310_18425, RNA1509_50196, RNA1509_50379, RNA1509_9957} {RNA1509_50196, RNA1509_50379, RNA1509_9957, RNA815_6967}
12.	MligTC455_49093	22	0.46	Mlig455_009306	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_009306 {REF} {Length: 3759} {RNA1509_54671} {RNA1310_45500} {RNA815_7423}
13.	MligTC455_50634	63	1.32	Mlig455_005682	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_005682 {REF} {Length: 2640} {TRANSSPLICED} {Smed: dd_Smed_v6_12339_0_1, dd_Smed_v6_12339_0_1, [Score=44.7, Expect=1e-05]} {RNA1509_21917} {RNA1310_12437.2} {RNA815_12111}
14.	MligTC455_51338	116	2.41	Mlig455_044498	Neo: - Age: Up-Up-Up, logFC(26M/2M)=0.574	IARS2	0.954	-	-	-	-	-	0.954	Mlig455_044498 {REF} {Length: 3714} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=459.3]; tRNA synthetases class I (M) [PF09334.13, score=66.5]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=46.4]; Leucyl-tRNA synthetase, Domain 2 [PF13603.8, score=24.8]} {Human: ENSG00000067704, IARS2, isoleucyl-tRNA synthetase 2, mitochondrial, [RH, Score=564, Expect=0.0]} {Mouse: ENSMUSG00000026618, Iars2, isoleucine-tRNA synthetase 2, mitochondrial, [RH, Score=565, Expect=0.0]} {Dmel: FBgn0036569, IleRS-m, Isoleucyl-tRNA synthetase, mitochondrial, [RH, Score=513, Expect=1e-166]} {Celegans: WBGene00002153, iars-2, Isoleucyl Amino-acyl tRNA Synthetase, [RH, Score=460, Expect=5e-146]} {Smed: dd_Smed_v6_7613_0_1, dd_Smed_v6_7613_0_1, [RH, Score=526, Expect=2e-171]} {RNA1509_14916} {RNA1310_3724} {RNA815_38112}
15.	MligTC455_50719	18	0.38	Mlig455_065889	Neo: - Age: -	GRM7	0.953	-	-	-	0.953	-	-	Mlig455_065889 {REF} {Length: 3717} {Pfam: Receptor family ligand binding region [PF01094.30, score=184.7]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=46.4]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=41.8]; Periplasmic binding protein [PF13458.8, score=22.8]} {Human: ENSG00000196277, GRM7, glutamate metabotropic receptor 7, [Score=389, Expect=6e-126]; ENSG00000124493, GRM4, glutamate metabotropic receptor 4, [Score=385, Expect=3e-124]; ENSG00000113262, GRM6, glutamate metabotropic receptor 6, [Score=373, Expect=4e-120]} {Mouse: ENSMUSG00000063239, Grm4, glutamate receptor, metabotropic 4, [Score=396, Expect=8e-129]; ENSMUSG00000056755, Grm7, glutamate receptor, metabotropic 7, [Score=392, Expect=2e-127]} {Dmel: FBgn0019985, mGluR, metabotropic Glutamate Receptor, [Score=296, Expect=9e-91]} {Celegans: WBGene00021152, mgl-3, Metabotropic GLutamate receptor family, [Score=268, Expect=5e-80]} {Smed: dd_Smed_v6_15419_0_1, dd_Smed_v6_15419_0_1, [Score=249, Expect=6e-73]} {RNA1310_59160}
16.	MligTC455_51749	18	0.37	Mlig455_014942	Neo: - Age: -	SYK	0.953	-	-	-	0.953	-	-	Mlig455_014942 {REF} {Length: 2880} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=273.6]; Protein kinase domain [PF00069.27, score=125.0]; SH2 domain [PF00017.26, score=112.5]} {Human: ENSG00000165025, SYK, spleen associated tyrosine kinase, [RH, Score=260, Expect=6e-77]} {Mouse: ENSMUSG00000021457, Syk, spleen tyrosine kinase, [RH, Score=257, Expect=1e-75]} {Dmel: FBgn0015295, Shark, SH2 ankyrin repeat kinase, [Score=212, Expect=6e-58]} {Celegans: WBGene00005078, src-2, Tyrosine protein-kinase src-2, [Score=210, Expect=6e-60]} {Smed: dd_Smed_v6_9075_0_5, dd_Smed_v6_9075_0_5, [Score=527, Expect=1e-177]} {RNA1509_39526} {RNA1310_12548.1} {RNA815_24011}
17.	MligTC455_14088	71	1.47	Mlig455_005255	Neo: - Age: Up-Up-Down	SEC14L4	0.952	-	-	-	-	0.952	-	Mlig455_005255 {REF} {Length: 2114} {Pfam: CRAL/TRIO domain [PF00650.22, score=81.8]} {Human: ENSG00000133488, SEC14L4, SEC14 like lipid binding 4, [Score=144, Expect=1e-39]; ENSG00000214491, SEC14L6, SEC14 like lipid binding 6, [Score=139, Expect=3e-37]; ENSG00000100003, SEC14L2, SEC14 like lipid binding 2, [Score=139, Expect=2e-37]} {Mouse: ENSMUSG00000003585, Sec14l2, SEC14-like lipid binding 2, [Score=144, Expect=1e-39]; ENSMUSG00000054986, Sec14l3, SEC14-like lipid binding 3, [Score=140, Expect=4e-38]} {Dmel: FBgn0035146, CG13893, [Score=89.0, Expect=2e-19]} {Celegans: WBGene00011962, T23G5.2, CRAL-TRIO domain-containing protein T23G5.2, [Score=103, Expect=2e-24]} {Smed: dd_Smed_v6_12821_0_1, dd_Smed_v6_12821_0_1, [Score=154, Expect=1e-43]} {RNA1509_36146} {RNA1310_31007} {RNA815_24143}
18.	MligTC455_27921	274	5.7	Mlig455_010029	Neo: - Age: Up-Up-Down, logFC(26M/2M)=1.105	ACP7	0.952	-	-	-	0.952	-	-	Mlig455_010029 {REF} {Length: 2134} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=89.4]; Iron/zinc purple acid phosphatase-like protein C [PF14008.8, score=68.9]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=61.1]} {Human: ENSG00000183760, ACP7, acid phosphatase 7, tartrate resistant (putative), [RH, Score=423, Expect=4e-145]} {Mouse: ENSMUSG00000037469, Acp7, acid phosphatase 7, tartrate resistant, [Score=428, Expect=2e-146]} {Dmel: FBgn0030245, CG1637, [RH, Score=428, Expect=3e-147]} {Celegans: WBGene00219316, F21A3.11, Purple acid phosphatase, [Score=360, Expect=6e-120]} {Smed: dd_Smed_v6_2643_0_1, dd_Smed_v6_2643_0_1, [RH, Score=395, Expect=1e-134]} {RNA1509_17577} {RNA1310_12439} {RNA815_4397}
19.	MligTC455_17192	43	0.89	Mlig455_060323	Neo: - Age: -		0.95	-	-	-	0.950	-	-	Mlig455_060323 {REF} {Length: 504} {NoTransDecoderORF} {RNA1310_129337}

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