Data search
Results for MligTC455_43250
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43250 | 461 | 9.60 | Mlig455_016728 | Neo: - Age: Up-Down-Up |
MKLN1 | Mlig455_016728 {REF} {Length: 1808} {Human: ENSG00000128585, MKLN1, muskelin 1, [Score=92.4, Expect=3e-20]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=92.8, Expect=2e-22]} {Dmel: FBgn0033757, muskelin, [Score=95.1, Expect=2e-21]} {RNA1509_13339} {RNA1310_3016.1} {RNA815_1486} |
Cumulative graph for MligTC455_43250
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.605 | 3.651 | 0.56133 | 1.00000 | |
| RegionR2 | 0.417 | 3.651 | 0.42097 | 0.81234 | |
| RegionR3 | -0.434 | 3.651 | 0.27295 | 0.81737 | |
| RegionR4 | -0.882 | 3.651 | 0.07484 | 0.25326 | |
| RegionR5 | 0.556 | 3.651 | 0.07928 | 0.26041 | |
| RegionR6 | -0.029 | 3.651 | 0.94074 | 1.00000 | |
| RegionR7 | -0.045 | 3.651 | 0.93809 | 1.00000 | |
| RegionR8 | -0.187 | 3.651 | 0.79939 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.708 | 3.651 | 0.11397 | 0.83847 | |
| RegenerationR2 | 0 | 3.651 | 0.99897 | 1.00000 | |
| RegenerationR3 | 0.534 | 3.651 | 0.24843 | 0.68263 | |
| RegenerationR4 | 0.755 | 3.651 | 0.10633 | 0.50320 | |
| RegenerationR5 | -0.137 | 3.651 | 0.72690 | 0.96192 | |
| RegenerationR6 | 0.508 | 3.651 | 0.26240 | 0.61238 | |
| RegenerationBL | 1.54 | 3.651 | 0.00296 | 0.04639 | |
| RegenerationTP | -0.589 | 3.651 | 0.42744 | 0.85065 |
Genes with expression patterns similar to MligTC455_43250
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43250 | 461 | 9.6 | Mlig455_016728 | Neo: - Age: Up-Down-Up |
MKLN1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_016728 {REF} {Length: 1808} {Human: ENSG00000128585, MKLN1, muskelin 1, [Score=92.4, Expect=3e-20]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=92.8, Expect=2e-22]} {Dmel: FBgn0033757, muskelin, [Score=95.1, Expect=2e-21]} {RNA1509_13339} {RNA1310_3016.1} {RNA815_1486} |
| 2. | MligTC455_43251 | 460 | 9.59 | Mlig455_016660, Mlig455_016727 | Neo: - Age: - |
MKLN1 | 5.997 | 1.000 | 0.997 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_016660 {REF} {Length: 3631} {TRANSSPLICED} {Pfam: Muskelin N-terminus [PF06588.13, score=195.6]; Galactose oxidase, central domain [PF13415.8, score=76.5]; Kelch motif [PF13964.8, score=40.9]; Kelch motif [PF01344.27, score=36.8]; Galactose oxidase, central domain [PF13418.8, score=34.8]; Kelch motif [PF13854.8, score=31.7]; Kelch motif [PF07646.17, score=27.0]} {Human: ENSG00000128585, MKLN1, muskelin 1, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0033757, muskelin, [RH, Score=489, Expect=4e-160]} {RNA1509_13339, RNA1509_15922} {RNA1310_3016.1, RNA1509_13339, RNA1509_15922} {RNA1509_13339, RNA1509_15922, RNA815_1486} Mlig455_016727 {REF} {Length: 279} {TRANSSPLICED} {Pfam: Muskelin N-terminus [PF06588.13, score=195.6]; Galactose oxidase, central domain [PF13415.8, score=76.5]; Kelch motif [PF13964.8, score=40.9]; Kelch motif [PF01344.27, score=36.8]; Galactose oxidase, central domain [PF13418.8, score=34.8]; Kelch motif [PF13854.8, score=31.7]; Kelch motif [PF07646.17, score=27.0]} {Human: ENSG00000128585, MKLN1, muskelin 1, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000025609, Mkln1, muskelin 1, intracellular mediator containing kelch motifs, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0033757, muskelin, [RH, Score=489, Expect=4e-160]} {RNA1509_15922} {RNA1310_20443} {RNA815_1486} |
| 3. | MligTC455_25575 | 632 | 13.16 | Mlig455_024666 | Neo: Int S/G2/M Age: - |
EDC4 | 1.709 | - | - | - | 0.742 | - | 0.967 | Mlig455_024666 {REF} {Length: 4085} {TRANSSPLICED} {Pfam: WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=243.2]} {Human: ENSG00000038358, EDC4, enhancer of mRNA decapping 4, [RH, Score=192, Expect=5e-49]} {Mouse: ENSMUSG00000036270, Edc4, enhancer of mRNA decapping 4, [RH, Score=189, Expect=3e-48]} {Dmel: FBgn0283682, Ge-1, [RH, Score=161, Expect=8e-40]} {Smed: dd_Smed_v6_2416_0_1, dd_Smed_v6_2416_0_1, [RH, Score=167, Expect=5e-42]} {RNA1509_5030, RNA1509_52695} {RNA1310_2147, RNA1509_5030, RNA1509_52695} {RNA1509_5030, RNA1509_52695, RNA815_8608} |
| 4. | MligTC455_41804 | 1219 | 25.39 | Mlig455_001657, Mlig455_050107 | Neo: - Age: - |
TBL1XR1 | 1.678 | - | - | 0.724 | 0.954 | - | - | Mlig455_001657 {REF} {Length: 1216} {RNA1509_35536} {RNA1310_48446.1, RNA1509_35536} {RNA1509_35536, RNA815_1670} Mlig455_050107 {REF} {Length: 3364} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=158.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=104.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=41.5]; LisH [PF08513.13, score=24.5]; Coatomer WD associated region [PF04053.16, score=22.5]} {Human: ENSG00000177565, TBL1XR1, transducin beta like 1 X-linked receptor 1, [RH, Score=684, Expect=0.0]; ENSG00000101849, TBL1X, transducin beta like 1 X-linked, [RH, Score=679, Expect=0.0]; ENSG00000092377, TBL1Y, transducin beta like 1 Y-linked, [RH, Score=673, Expect=0.0]} {Mouse: ENSMUSG00000027630, Tbl1xr1, transducin (beta)-like 1X-linked receptor 1, [RH, Score=692, Expect=0.0]; ENSMUSG00000025246, Tbl1x, transducin (beta)-like 1 X-linked, [RH, Score=677, Expect=0.0]} {Dmel: FBgn0263933, ebi, [RH, Score=568, Expect=0.0]} {Celegans: WBGene00021074, W07E6.2, [Score=109, Expect=2e-25]} {Smed: dd_Smed_v6_3247_0_1, dd_Smed_v6_3247_0_1, [RH, Score=519, Expect=1e-180]} {RNA1509_10901} {RNA1310_6496.1, RNA1509_10901} {RNA1509_10901, RNA815_1670} |
| 5. | MligTC455_20431 | 57 | 1.18 | Mlig455_002257 | Neo: Irradiation Age: - |
TP53BP1 | 0.972 | - | - | - | - | - | 0.972 | Mlig455_002257 {REF} {Length: 7030} {Human: ENSG00000067369, TP53BP1, tumor protein p53 binding protein 1, [RH, Score=89.4, Expect=2e-17]} {Mouse: ENSMUSG00000043909, Trp53bp1, transformation related protein 53 binding protein 1, [RH, Score=87.8, Expect=5e-17]} {RNA1509_39267, RNA1509_51455} {RNA1310_14436, RNA1509_39267} {RNA1509_39267, RNA815_16236} |
| 6. | MligTC455_43612 | 529 | 11.02 | Mlig455_041699 | Neo: - Age: - Region-enriched R4: 2.004/0.02294 |
ZMYND8 | 0.972 | - | - | - | 0.972 | - | - | Mlig455_041699 {REF} {Length: 4769} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=57.7]; PWWP domain [PF00855.19, score=20.9]; MYND finger [PF01753.20, score=19.3]} {Human: ENSG00000101040, ZMYND8, zinc finger MYND-type containing 8, [RH, Score=177, Expect=6e-45]} {Mouse: ENSMUSG00000039671, Zmynd8, zinc finger, MYND-type containing 8, [RH, Score=180, Expect=4e-46]} {Dmel: FBgn0039863, CG1815, [RH, Score=135, Expect=7e-32]} {Celegans: WBGene00000262, bra-1, BMP Receptor Associated protein family, [Score=72.4, Expect=3e-14]} {Smed: dd_Smed_v6_8799_0_1, dd_Smed_v6_8799_0_1, [RH, Score=144, Expect=2e-35]} {RNA1509_7947} {RNA1310_6002.1} {RNA815_2797} |
| 7. | MligTC455_18687 | 156 | 3.25 | Mlig455_061195 | Neo: - Age: Down-Down-Up Region-enriched R5: 2.659/0.04682 |
C9orf78 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_061195 {REF} {Length: 1320} {TRANSSPLICED} {Pfam: Hepatocellular carcinoma-associated antigen 59 [PF07052.13, score=75.1]} {Human: ENSG00000136819, C9orf78, chromosome 9 open reading frame 78, [RH, Score=80.1, Expect=1e-16]} {Mouse: ENSMUSG00000026851, BC005624, cDNA sequence BC005624, [RH, Score=82.8, Expect=8e-18]} {Dmel: FBgn0035254, CG7974, [RH, Score=90.1, Expect=1e-20]} {Smed: dd_Smed_v6_8171_0_1, dd_Smed_v6_8171_0_1, [RH, Score=89.0, Expect=1e-20]} {RNA1509_42392} {RNA1310_25572} {RNA815_11025} |
| 8. | MligTC455_17816 | 811 | 16.89 | Mlig455_062825 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.393/0.00001 |
0.967 | - | - | - | - | - | 0.967 | Mlig455_062825 {REF} {Length: 551} {TRANSSPLICED} {Pfam: Mitochondrial ribosome protein 63 [PF14978.8, score=34.9]} {Smed: dd_Smed_v6_6347_0_1, dd_Smed_v6_6347_0_1, [RH, Score=79.7, Expect=2e-20]} {RNA1509_15240, RNA1509_16711, RNA1509_17890} {RNA1310_49004, RNA1509_15240, RNA1509_16711, RNA1509_17890} {RNA1509_15240, RNA1509_16711, RNA1509_17890, RNA815_33851} | |
| 9. | MligTC455_22933 | 497 | 10.36 | Mlig455_043362 | Neo: - Age: - |
CNPY2 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_043362 {REF} {Length: 2002} {TRANSSPLICED} {Pfam: TLR4 regulator and MIR-interacting MSAP [PF11938.10, score=79.6]} {Human: ENSG00000257727, CNPY2, canopy FGF signaling regulator 2, [RH, Score=70.5, Expect=2e-14]; ENSG00000144785, AC073896.1, novel protein, [RH, Score=69.7, Expect=2e-13]} {Mouse: ENSMUSG00000025381, Cnpy2, canopy FGF signaling regulator 2, [RH, Score=68.2, Expect=1e-13]} {Celegans: WBGene00017169, F01F1.15, [Score=56.6, Expect=1e-09]} {RNA1509_46925, RNA1509_52897} {RNA1310_13660.1, RNA1509_46925, RNA1509_52897} {RNA1509_46925, RNA1509_52897, RNA815_7407.1} |
| 10. | MligTC455_03788 | 747 | 15.57 | Mlig455_028711 | Neo: - Age: - |
TRMT1L | 0.961 | - | - | - | - | 0.961 | - | Mlig455_028711 {REF} {Length: 1861} {TRANSSPLICED} {Pfam: N2,N2-dimethylguanosine tRNA methyltransferase [PF02005.18, score=190.2]} {Human: ENSG00000121486, TRMT1L, tRNA methyltransferase 1 like, [RH, Score=203, Expect=2e-57]} {Mouse: ENSMUSG00000053286, Trmt1l, tRNA methyltransferase 1 like, [RH, Score=194, Expect=3e-54]} {Dmel: FBgn0032430, CG6388, [Score=86.3, Expect=1e-17]} {Celegans: WBGene00006613, trm-1, tRNA (guanine(26)-N(2))-dimethyltransferase, [Score=105, Expect=4e-24]} {Smed: dd_Smed_v6_9064_0_4, dd_Smed_v6_9064_0_4, [RH, Score=220, Expect=5e-67]} {RNA1509_31341} {RNA1310_6293, RNA1509_31341} {RNA1509_31341, RNA815_22287} |
| 11. | MligTC455_26150 | 294 | 6.13 | Mlig455_009968, Mlig455_042983 | Neo: - Age: - |
HINT3 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_009968 {REF} {Length: 2988} {Pfam: Scavenger mRNA decapping enzyme C-term binding [PF11969.10, score=74.9]; Methyltransferase domain [PF13383.8, score=33.5]; HIT domain [PF01230.25, score=26.3]} {Human: ENSG00000111911, HINT3, histidine triad nucleotide binding protein 3, [Score=99.8, Expect=1e-23]} {Mouse: ENSMUSG00000019791, Hint3, histidine triad nucleotide binding protein 3, [Score=101, Expect=1e-24]} {Dmel: FBgn0054015, CG34015, [Score=79.0, Expect=3e-17]} {Celegans: WBGene00016150, hint-3, HIstidiNe Triad nucleotide-binding protein, [Score=65.9, Expect=2e-12]} {Smed: dd_Smed_v6_11146_0_1, dd_Smed_v6_11146_0_1, [Score=112, Expect=5e-29]} {RNA1509_27348, RNA1509_45349} {RNA1310_31851.1, RNA1509_27348} {RNA1509_27348, RNA815_16272.1} Mlig455_042983 {REF} {Length: 654} {Pfam: Domain of unknown function (DUF4081) [PF13312.8, score=35.0]; Ribosomal protein S31e [PF17067.7, score=21.9]} {RNA1509_37248} {RNA1310_104355} {RNA815_13586} |
| 12. | MligTC455_38322 | 256 | 5.34 | Mlig455_056978 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.286/0.01138 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_056978 {REF} {Length: 1123} {TRANSSPLICED} {RNA1509_54870} {RNA1310_32129, RNA1509_54870} {RNA1509_54870, RNA815_14647} | |
| 13. | MligTC455_20430 | 68 | 1.42 | Mlig455_002157 | Neo: - Age: - |
TP53BP1 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_002157 {REF} {Length: 6574} {Human: ENSG00000067369, TP53BP1, tumor protein p53 binding protein 1, [RH, Score=86.3, Expect=3e-16]} {Mouse: ENSMUSG00000043909, Trp53bp1, transformation related protein 53 binding protein 1, [RH, Score=85.9, Expect=2e-16]} {RNA1509_51455} {RNA1310_14436, RNA1509_51455} {RNA1509_51455, RNA815_16236} |
| 14. | MligTC455_51549 | 114 | 2.37 | Mlig455_039237 | Neo: - Age: Down-Down-Up Regeneration-upregulated TP: 6.202 Regeneration-enriched TP: 6.202 |
0.956 | - | - | - | - | - | 0.956 | Mlig455_039237 {REF} {Length: 3108} {RNA1509_28709} {RNA1310_23779.2} {RNA815_36053} | |
| 15. | MligTC455_32055 | 618 | 12.88 | Mlig455_040050 | Neo: - Age: - Region-enriched R5: 1.705/0.04238 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_040050 {REF} {Length: 6034} {RNA1509_30489} {RNA1310_22669} {RNA815_17677} | |
| 16. | MligTC455_32673 | 130 | 2.7 | Mlig455_033262 | Neo: - Age: Down-Up-Down Region-enriched R2: 3.975/0.02064 Regeneration-upregulated R3: 4.181 Regeneration-enriched R3: 4.181 |
VTI1A | 0.951 | - | - | - | - | - | 0.951 | Mlig455_033262 {REF} {Length: 2055} {TRANSSPLICED} {Pfam: Vesicle transport v-SNARE protein N-terminus [PF05008.17, score=59.4]; Snare region anchored in the vesicle membrane C-terminus [PF12352.10, score=55.0]; Sec20 [PF03908.15, score=21.8]} {Human: ENSG00000151532, VTI1A, vesicle transport through interaction with t-SNAREs 1A, [RH, Score=174, Expect=9e-54]} {Mouse: ENSMUSG00000024983, Vti1a, vesicle transport through interaction with t-SNAREs 1A, [RH, Score=175, Expect=2e-54]} {Dmel: FBgn0260862, Vti1a, Vesicle transport through interaction with t-SNAREs 1a, [RH, Score=145, Expect=9e-43]} {Celegans: WBGene00013302, vti-1, VTI (Vesicle Transport through t-SNARE Interaction) homolog, [Score=114, Expect=9e-31]} {Smed: dd_Smed_v6_5094_0_1, dd_Smed_v6_5094_0_1, [RH, Score=157, Expect=1e-47]} {RNA1509_11936, RNA1509_23493} {RNA1310_29540.1, RNA1509_23493} {RNA1509_23493, RNA815_14399} |
Berezikov Lab - 2020-2021 © ERIBA