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Results for MligTC455_20450

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20450 21 0.45 Mlig455_006109

Neo: -

Age: -

 Mlig455_006109 {REF} {Length: 2208} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.6]} {RNA1310_20037} {RNA815_46187}

Cumulative graph for MligTC455_20450

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.112 0.768 1.00000 1.00000
RegionR2 -0.371 0.768 0.87844 1.00000
RegionR3 2.099 0.768 0.60274 1.00000
RegionR4 1.387 0.768 0.99966 1.00000
RegionR5 0.287 0.768 1.00000 1.00000
RegionR6 0.117 0.768 0.47919 1.00000
RegionR7 -1.683 0.768 0.99980 1.00000
RegionR8 0.277 0.768 0.99976 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.455 0.768 1.00000 1.00000
RegenerationR2 -0.486 0.768 0.35446 0.78475
RegenerationR3 -2.204 0.768 0.65972 0.93314
RegenerationR4 0.137 0.768 0.44441 0.83914
RegenerationR5 -0.135 0.768 0.52030 0.86987
RegenerationR6 0.619 0.768 0.71078 0.93048
RegenerationBL 0.144 0.768 0.79912 1.00000
RegenerationTP -1.455 0.768 1.00000 1.00000


Genes with expression patterns similar to MligTC455_20450

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20450 21 0.45 Mlig455_006109

Neo: -

Age: -

 2 - - - 1.000 1.000 - Mlig455_006109 {REF} {Length: 2208} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.6]} {RNA1310_20037} {RNA815_46187}
2. MligTC455_41449 60 1.25 Mlig455_063380

Neo: -

Age: Down-Up-Up

 0.963 - - - 0.963 - - Mlig455_063380 {REF} {Length: 673} {RNA1310_71257} {RNA815_40073}
3. MligTC455_52055 131 2.73 Mlig455_030494

Neo: Int S/G2/M

Age: -

 RECQL4 0.96 - - - 0.960 - - Mlig455_030494 {REF} {Length: 5079} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=68.7]; DEAD/DEAH box helicase [PF00270.31, score=62.4]; DNA replication and checkpoint protein [PF11719.10, score=44.2]; Zinc knuckle [PF00098.25, score=23.0]; Type III restriction enzyme, res subunit [PF04851.17, score=22.8]} {Human: ENSG00000160957, RECQL4, RecQ like helicase 4, [RH, Score=479, Expect=1e-147]} {Mouse: ENSMUSG00000033762, Recql4, RecQ protein-like 4, [RH, Score=456, Expect=4e-139]} {Dmel: FBgn0040290, RecQ4, RecQ4 helicase, [RH, Score=414, Expect=7e-122]} {Celegans: WBGene00019334, K02F3.12, Putative ATP-dependent DNA helicase Q1, [Score=186, Expect=3e-49]} {Smed: dd_Smed_v6_8570_0_1, dd_Smed_v6_8570_0_1, [RH, Score=449, Expect=6e-138]} {RNA1509_40600} {RNA1310_35798} {RNA815_32185}
4. MligTC455_04118 14 0.29 Mlig455_035415

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_035415 {REF} {Length: 828} {RNA1310_20357.2} {RNA815_20589}
5. MligTC455_53098 10 0.2 Mlig455_000210

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_000210 {REF} {Length: 1856} {NoTransDecoderORF} {RNA1509_35494} {RNA1310_44521} {RNA815_38154}
6. MligTC455_00363 3 0.07 Mlig455_039546

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_039546 {REF} {Length: 444} {Pfam: Glutamyl-tRNAGlu reductase, dimerisation domain [PF00745.22, score=19.5]}
7. MligTC455_39599 28 0.59 Mlig455_051652

Neo: -

Age: -

 SRSF10 0.955 - - - - 0.955 - Mlig455_051652 {REF} {Length: 996} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=66.5]} {Human: ENSG00000188529, SRSF10, serine and arginine rich splicing factor 10, [RH, Score=89.7, Expect=2e-20]} {Mouse: ENSMUSG00000028676, Srsf10, serine/arginine-rich splicing factor 10, [RH, Score=89.7, Expect=1e-20]; ENSMUSG00000054679, Srsf12, serine/arginine-rich splicing factor 12, [RH, Score=88.6, Expect=3e-20]} {Dmel: FBgn0263829, CG34334, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00004387, rnp-4, RNA-binding protein 8A, [Score=65.1, Expect=5e-13]} {Smed: dd_Smed_v6_661_0_6, dd_Smed_v6_661_0_6, [RH, Score=102, Expect=1e-27]} {RNA1509_1745} {RNA1310_13715.1} {RNA815_6033.1}
8. MligTC455_48153 24 0.49 Mlig455_070242

Neo: -

Age: -

 0.955 - - - 0.955 - - Mlig455_070242 {REF} {Length: 509} {NoTransDecoderORF} {RNA1509_50393} {RNA1310_62629} {RNA815_21673}
9. MligTC455_37435 11 0.22 Mlig455_017758

Neo: -

Age: Up-Down-Up

 LRFN4 0.954 - - - - 0.954 - Mlig455_017758 {REF} {Length: 4500} {Pfam: Leucine rich repeat [PF13855.8, score=93.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=70.4]; Leucine Rich Repeat [PF00560.35, score=26.5]; Leucine Rich repeat [PF13516.8, score=22.9]} {Human: ENSG00000173621, LRFN4, leucine rich repeat and fibronectin type III domain containing 4, [Score=60.5, Expect=2e-08]} {Mouse: ENSMUSG00000032913, Lrig2, leucine-rich repeats and immunoglobulin-like domains 2, [Score=77.4, Expect=9e-14]} {Dmel: FBgn0261269, conv, convoluted, [Score=70.9, Expect=7e-12]} {Celegans: WBGene00020649, sma-10, Leucine-rich repeats and immunoglobulin-like domains protein sma-10, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_9666_0_1, dd_Smed_v6_9666_0_1, [Score=59.7, Expect=7e-09]} {RNA1509_18335} {RNA1310_2163} {RNA815_1222}
10. MligTC455_10611 8 0.16 Mlig455_039376

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_039376 {REF} {Length: 1331} {NoTransDecoderORF} {RNA1310_16437.2} {RNA815_53588}
11. MligTC455_17126 3 0.06 Mlig455_033793

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_033793 {REF} {Length: 471} {NoTransDecoderORF}
12. MligTC455_17795 8 0.17 Mlig455_070061

Neo: -

Age: Down-Down-Up

 0.953 - - - - 0.953 - Mlig455_070061 {REF} {Length: 2709} {TRANSSPLICED} {Pfam: U1 small nuclear ribonucleoprotein of 70kDa MW N terminal [PF12220.10, score=21.2]} {RNA1509_10199} {RNA1310_16210} {RNA815_7019}
13. MligTC455_17130 13 0.27 Mlig455_053033

Neo: Irradiation

Age: -

 0.952 - - - - 0.952 - Mlig455_053033 {REF} {Length: 2999} {RNA1509_8183} {RNA1310_4256} {RNA815_2602}
14. MligTC455_37730 19 0.4 Mlig455_020506

Neo: -

Age: Down-Up-Down

 0.952 - - - - 0.952 - Mlig455_020506 {REF} {Length: 2657} {RNA1509_51141} {RNA1310_26081.1} {RNA815_15662}
15. MligTC455_54633 10 0.22 Mlig455_016883

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_016883 {REF} {Length: 283} {NoTransDecoderORF}
16. MligTC455_23790 453 9.43 Mlig455_009423

Neo: -

Age: logFC(26M/2M)=0.217

 0.951 - - - - 0.951 - Mlig455_009423 {REF} {Length: 6863} {TRANSSPLICED} {RNA1509_36669, RNA1509_39243, RNA1509_40806, RNA1509_60010} {RNA1310_11105, RNA1509_36669, RNA1509_40806, RNA1509_60010} {RNA1509_36669, RNA1509_40806, RNA1509_60010, RNA815_1240.1}

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