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Results for MligTC455_52055

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52055 131 2.73 Mlig455_030494

Neo: Int S/G2/M

Age: -

 RECQL4 Mlig455_030494 {REF} {Length: 5079} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=68.7]; DEAD/DEAH box helicase [PF00270.31, score=62.4]; DNA replication and checkpoint protein [PF11719.10, score=44.2]; Zinc knuckle [PF00098.25, score=23.0]; Type III restriction enzyme, res subunit [PF04851.17, score=22.8]} {Human: ENSG00000160957, RECQL4, RecQ like helicase 4, [RH, Score=479, Expect=1e-147]} {Mouse: ENSMUSG00000033762, Recql4, RecQ protein-like 4, [RH, Score=456, Expect=4e-139]} {Dmel: FBgn0040290, RecQ4, RecQ4 helicase, [RH, Score=414, Expect=7e-122]} {Celegans: WBGene00019334, K02F3.12, Putative ATP-dependent DNA helicase Q1, [Score=186, Expect=3e-49]} {Smed: dd_Smed_v6_8570_0_1, dd_Smed_v6_8570_0_1, [RH, Score=449, Expect=6e-138]} {RNA1509_40600} {RNA1310_35798} {RNA815_32185}

Cumulative graph for MligTC455_52055

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.629 2.296 0.10718 0.68474
RegionR2 2.08 2.296 0.05203 0.27280
RegionR3 0.478 2.296 0.45664 0.96758
RegionR4 -3.018 2.296 0.00181 0.01657
RegionR5 1.213 2.296 0.03927 0.15730
RegionR6 -1.051 2.296 0.20067 0.77235
RegionR7 2.173 2.296 0.00964 0.16771
RegionR8 0.754 2.296 0.59900 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.59 2.296 0.90430 1.00000
RegenerationR2 1.802 2.296 0.07533 0.44322
RegenerationR3 1.33 2.296 0.17499 0.61064
RegenerationR4 2.473 2.296 0.01252 0.17226
RegenerationR5 0.895 2.296 0.17978 0.60900
RegenerationR6 3.743 2.296 0.00068 0.02777
RegenerationBL 2.053 2.296 0.13653 0.44016
RegenerationTP -0.048 2.296 0.99329 1.00000


Genes with expression patterns similar to MligTC455_52055

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52055 131 2.73 Mlig455_030494

Neo: Int S/G2/M

Age: -

 RECQL4 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_030494 {REF} {Length: 5079} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=68.7]; DEAD/DEAH box helicase [PF00270.31, score=62.4]; DNA replication and checkpoint protein [PF11719.10, score=44.2]; Zinc knuckle [PF00098.25, score=23.0]; Type III restriction enzyme, res subunit [PF04851.17, score=22.8]} {Human: ENSG00000160957, RECQL4, RecQ like helicase 4, [RH, Score=479, Expect=1e-147]} {Mouse: ENSMUSG00000033762, Recql4, RecQ protein-like 4, [RH, Score=456, Expect=4e-139]} {Dmel: FBgn0040290, RecQ4, RecQ4 helicase, [RH, Score=414, Expect=7e-122]} {Celegans: WBGene00019334, K02F3.12, Putative ATP-dependent DNA helicase Q1, [Score=186, Expect=3e-49]} {Smed: dd_Smed_v6_8570_0_1, dd_Smed_v6_8570_0_1, [RH, Score=449, Expect=6e-138]} {RNA1509_40600} {RNA1310_35798} {RNA815_32185}
2. MligTC455_36741 1292 26.91 Mlig455_058926

Neo: Int S/G2/M

Age: -

 TKT 1.788 0.818 - - - 0.970 - Mlig455_058926 {REF} {Length: 3010} {Pfam: Transketolase, thiamine diphosphate binding domain [PF00456.23, score=158.7]; Transketolase, pyrimidine binding domain [PF02779.26, score=130.2]; Transketolase, C-terminal domain [PF02780.22, score=104.1]; Dehydrogenase E1 component [PF00676.22, score=31.5]; 1-deoxy-D-xylulose-5-phosphate synthase [PF13292.8, score=29.4]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.23, score=23.6]; XFP N-terminal domain [PF09364.12, score=22.4]} {Human: ENSG00000163931, TKT, transketolase, [RH, Score=766, Expect=0.0]} {Mouse: ENSMUSG00000021957, Tkt, transketolase, [RH, Score=772, Expect=0.0]; ENSMUSG00000025519, Tktl2, transketolase-like 2, [RH, Score=762, Expect=0.0]} {Dmel: FBgn0037607, CG8036, [RH, Score=769, Expect=0.0]} {Celegans: WBGene00008506, tkt-1, TransKeTolase homolog, [RH, Score=714, Expect=0.0]} {Smed: dd_Smed_v6_550_0_1, dd_Smed_v6_550_0_1, [RH, Score=796, Expect=0.0]} {RNA1509_12999, RNA1509_3095, RNA1509_32007, RNA1509_9854} {RNA1310_5085.1, RNA1509_12999, RNA1509_3095, RNA1509_32007, RNA1509_9854} {RNA1509_12999, RNA1509_3095, RNA1509_32007, RNA1509_9854, RNA815_795.1}
3. MligTC455_36280 634 13.2 Mlig455_045390, Mlig455_045485

Neo: -

Age: -

Region-enriched R5: 1.183/0.04653

Regeneration-upregulated BL: 2.313

Regeneration-enriched BL: 2.313

 SON 1.688 0.738 - - - - 0.950

Mlig455_045390 {REF} {Length: 2559} {TRANSSPLICED} {Pfam: G-patch domain [PF01585.25, score=52.4]; Double-stranded RNA binding motif [PF00035.28, score=39.9]; double strand RNA binding domain from DEAD END PROTEIN 1 [PF14709.9, score=33.3]; G-patch domain [PF12656.9, score=20.1]} {Human: ENSG00000159140, SON, SON DNA binding protein, [RH, Score=179, Expect=6e-46]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [RH, Score=178, Expect=6e-46]} {Dmel: FBgn0037716, CG8273, [RH, Score=130, Expect=8e-31]} {Celegans: WBGene00017025, D1037.1, [RH, Score=120, Expect=4e-28]} {Smed: dd_Smed_v6_11088_0_3, dd_Smed_v6_11088_0_3, [RH, Score=68.2, Expect=3e-12]} {RNA1509_19845} {RNA1310_13389, RNA1509_19845} {RNA1509_19845, RNA815_22165}

Mlig455_045485 {REF} {Length: 2759} {TRANSSPLICED} {Pfam: G-patch domain [PF01585.25, score=52.4]; G-patch domain [PF12656.9, score=20.1]} {Human: ENSG00000159140, SON, SON DNA binding protein, [RH, Score=144, Expect=1e-34]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [RH, Score=144, Expect=6e-35]} {Dmel: FBgn0037716, CG8273, [Score=100, Expect=2e-21]} {Celegans: WBGene00017025, D1037.1, [Score=89.7, Expect=3e-18]} {Smed: dd_Smed_v6_11088_0_2, dd_Smed_v6_11088_0_2, [RH, Score=58.9, Expect=3e-09]} {RNA1509_19845} {RNA1310_13389} {RNA815_22165}
4. MligTC455_14788 114 2.37 Mlig455_006986, Mlig455_017984

Neo: -

Age: -

 0.974 - - - 0.974 - -

Mlig455_006986 {REF} {Length: 1491} {RNA1509_19241} {RNA1310_18201.1}

Mlig455_017984 {REF} {Length: 1491} {RNA1509_19241} {RNA1310_18201.1}
5. MligTC455_20450 21 0.45 Mlig455_006109

Neo: -

Age: -

 0.96 - - - 0.960 - - Mlig455_006109 {REF} {Length: 2208} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.6]} {RNA1310_20037} {RNA815_46187}
6. MligTC455_19446 334 6.96 Mlig455_058253

Neo: -

Age: -

Region-enriched R5: 1.502/0.00083

 0.957 - - - - - 0.957 Mlig455_058253 {REF} {Length: 1699} {TRANSSPLICED} {tRNA: Gln(TTG), score=76.3} {Pfam: Uncharacterised protein family UPF0542 [PF15086.8, score=82.7]} {Smed: dd_Smed_v6_2870_0_1, dd_Smed_v6_2870_0_1, [RH, Score=57.0, Expect=6e-12]} {RNA1509_15931, RNA1509_41745} {RNA1310_23211.1, RNA1509_15931, RNA1509_41745} {RNA1509_15931, RNA1509_41745, RNA815_18569.1}
7. MligTC455_42293 28 0.59 Mlig455_053679

Neo: -

Age: -

 PIP5K1A 0.953 - - - 0.953 - - Mlig455_053679 {REF} {Length: 4383} {TRANSSPLICED} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=268.6]} {Human: ENSG00000143398, PIP5K1A, phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, [RH, Score=416, Expect=1e-140]} {Mouse: ENSMUSG00000034902, Pip5k1c, phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma, [RH, Score=409, Expect=2e-136]; ENSMUSG00000024867, Pip5k1b, phosphatidylinositol-4-phosphate 5-kinase, type 1 beta, [RH, Score=404, Expect=7e-136]} {Dmel: FBgn0016984, sktl, skittles, [Score=434, Expect=2e-144]} {Celegans: WBGene00004087, ppk-1, PIP Kinase, [Score=409, Expect=6e-137]} {Smed: dd_Smed_v6_7632_0_3, dd_Smed_v6_7632_0_3, [Score=419, Expect=4e-142]} {RNA1509_47422} {RNA1310_16235.2, RNA1509_47422} {RNA1509_47422, RNA815_4999.1}
8. MligTC455_19951 67 1.4 Mlig455_004842

Neo: -

Age: -

Region-enriched R5: 2.349/0.04566

 SLC30A7 0.951 - - - - - 0.951 Mlig455_004842 {REF} {Length: 1521} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=169.8]} {Human: ENSG00000162695, SLC30A7, solute carrier family 30 member 7, [Score=429, Expect=9e-150]} {Mouse: ENSMUSG00000054414, Slc30a7, solute carrier family 30 (zinc transporter), member 7, [Score=415, Expect=2e-144]} {Dmel: FBgn0037875, ZnT86D, Zinc transporter 86D, [RH, Score=384, Expect=2e-132]} {Celegans: WBGene00000393, cdf-1, Cation diffusion facilitator family protein 1, [Score=100, Expect=5e-23]} {Smed: dd_Smed_v6_4378_0_1, dd_Smed_v6_4378_0_1, [Score=241, Expect=7e-73]} {RNA1509_57158} {RNA1310_12102.2} {RNA815_7049}

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