Data search
Results for MligTC455_20512
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20512 | 247 | 5.16 | Mlig455_008861 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.781 Region-enriched R4: 1.961/0.01551 |
RPA1 | Mlig455_008861 {REF} {Length: 2393} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=152.9]; Replication protein A OB domain [PF16900.7, score=113.5]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=57.7]; OB-fold nucleic acid binding domain [PF01336.27, score=53.0]; Cell division control protein 24, OB domain 3 [PF17244.4, score=29.2]} {Human: ENSG00000132383, RPA1, replication protein A1, [RH, Score=484, Expect=2e-164]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [RH, Score=476, Expect=3e-161]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [RH, Score=439, Expect=4e-147]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [RH, Score=218, Expect=3e-62]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [RH, Score=415, Expect=1e-138]} {RNA1509_51558} {RNA1310_7820.2} {RNA815_3419} |
Cumulative graph for MligTC455_20512
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.815 | 2.821 | 0.54618 | 1.00000 | |
| RegionR2 | -1.854 | 2.821 | 0.01068 | 0.10516 | |
| RegionR3 | -0.183 | 2.821 | 0.74951 | 1.00000 | |
| RegionR4 | 1.961 | 2.821 | 0.00166 | 0.01551 | |
| RegionR5 | 0.338 | 2.821 | 0.51578 | 0.87849 | |
| RegionR6 | -0.247 | 2.821 | 0.68204 | 1.00000 | |
| RegionR7 | -0.797 | 2.821 | 0.31789 | 0.95287 | |
| RegionR8 | -0.033 | 2.821 | 0.97068 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.203 | 2.821 | 0.50330 | 1.00000 | |
| RegenerationR2 | 0.441 | 2.821 | 0.50817 | 0.87473 | |
| RegenerationR3 | -0.963 | 2.821 | 0.15146 | 0.58087 | |
| RegenerationR4 | -1.395 | 2.821 | 0.03055 | 0.28211 | |
| RegenerationR5 | -0.799 | 2.821 | 0.19396 | 0.62562 | |
| RegenerationR6 | -0.156 | 2.821 | 0.81805 | 0.98595 | |
| RegenerationBL | -2.385 | 2.821 | 0.02857 | 0.18783 | |
| RegenerationTP | -1.879 | 2.821 | 0.07326 | 0.43334 |
Genes with expression patterns similar to MligTC455_20512
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20512 | 247 | 5.16 | Mlig455_008861 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.781 Region-enriched R4: 1.961/0.01551 |
RPA1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_008861 {REF} {Length: 2393} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=152.9]; Replication protein A OB domain [PF16900.7, score=113.5]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=57.7]; OB-fold nucleic acid binding domain [PF01336.27, score=53.0]; Cell division control protein 24, OB domain 3 [PF17244.4, score=29.2]} {Human: ENSG00000132383, RPA1, replication protein A1, [RH, Score=484, Expect=2e-164]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [RH, Score=476, Expect=3e-161]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [RH, Score=439, Expect=4e-147]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [RH, Score=218, Expect=3e-62]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [RH, Score=415, Expect=1e-138]} {RNA1509_51558} {RNA1310_7820.2} {RNA815_3419} |
| 2. | MligTC455_49856 | 117 | 2.44 | Mlig455_054384 | Neo: - Age: Down-Up-Up |
0.983 | - | - | - | 0.983 | - | - | Mlig455_054384 {REF} {Length: 1051} {TRANSSPLICED} {RNA1509_28342} {RNA1310_29237} {RNA815_35815} | |
| 3. | MligTC455_21123 | 831 | 17.32 | Mlig455_026440, Mlig455_026472 | Neo: - Age: - |
ZC3H12A, ZC3H12C | 0.954 | - | - | - | - | 0.954 | - | Mlig455_026440 {REF} {Length: 3824} {TRANSSPLICED} {Pfam: Zc3h12a-like Ribonuclease NYN domain [PF11977.10, score=107.9]} {Human: ENSG00000163874, ZC3H12A, zinc finger CCCH-type containing 12A, [RH, Score=124, Expect=9e-29]; ENSG00000149289, ZC3H12C, zinc finger CCCH-type containing 12C, [RH, Score=124, Expect=2e-28]; ENSG00000102053, ZC3H12B, zinc finger CCCH-type containing 12B, [RH, Score=121, Expect=1e-27]; ENSG00000100441, KHNYN, KH and NYN domain containing, [RH, Score=118, Expect=8e-27]} {Mouse: ENSMUSG00000042677, Zc3h12a, zinc finger CCCH type containing 12A, [RH, Score=126, Expect=9e-30]; ENSMUSG00000035164, Zc3h12c, zinc finger CCCH type containing 12C, [RH, Score=125, Expect=8e-29]; ENSMUSG00000035045, Zc3h12b, zinc finger CCCH-type containing 12B, [RH, Score=120, Expect=2e-27]; ENSMUSG00000039981, Zc3h12d, zinc finger CCCH type containing 12D, [RH, Score=120, Expect=4e-28]} {Dmel: FBgn0038769, CG10889, [RH, Score=127, Expect=2e-30]} {Celegans: WBGene00016260, rege-1, Endoribonuclease rege-1, [RH, Score=98.2, Expect=6e-21]} {Smed: dd_Smed_v6_8040_0_1, dd_Smed_v6_8040_0_1, [RH, Score=102, Expect=3e-23]} {RNA1509_35735} {RNA1310_4673} {RNA815_1928.1} Mlig455_026472 {REF} {Length: 4337} {TRANSSPLICED} {Pfam: Zc3h12a-like Ribonuclease NYN domain [PF11977.10, score=107.9]; AAA domain [PF13476.8, score=19.5]} {Human: ENSG00000149289, ZC3H12C, zinc finger CCCH-type containing 12C, [RH, Score=124, Expect=2e-28]; ENSG00000163874, ZC3H12A, zinc finger CCCH-type containing 12A, [RH, Score=124, Expect=1e-28]; ENSG00000102053, ZC3H12B, zinc finger CCCH-type containing 12B, [RH, Score=121, Expect=1e-27]} {Mouse: ENSMUSG00000042677, Zc3h12a, zinc finger CCCH type containing 12A, [RH, Score=126, Expect=9e-30]; ENSMUSG00000035164, Zc3h12c, zinc finger CCCH type containing 12C, [RH, Score=125, Expect=8e-29]; ENSMUSG00000035045, Zc3h12b, zinc finger CCCH-type containing 12B, [RH, Score=120, Expect=2e-27]; ENSMUSG00000039981, Zc3h12d, zinc finger CCCH type containing 12D, [RH, Score=120, Expect=3e-28]} {Dmel: FBgn0038769, CG10889, [RH, Score=127, Expect=3e-30]} {Celegans: WBGene00016260, rege-1, Endoribonuclease rege-1, [RH, Score=98.6, Expect=6e-21]} {Smed: dd_Smed_v6_8040_0_1, dd_Smed_v6_8040_0_1, [RH, Score=102, Expect=3e-23]} {RNA1509_35735} {RNA1310_4673} {RNA815_1928.1} |
| 4. | MligTC455_20169 | 238 | 4.97 | Mlig455_014196 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.608 Region-enriched R6: 2.567/0.01858 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_014196 {REF} {Length: 3025} {RNA1509_37573} {RNA1310_22305, RNA1509_37573} {RNA1509_37573, RNA815_5167} | |
| 5. | MligTC455_21090 | 421 | 8.77 | Mlig455_014954 | Neo: - Age: logFC(26M/2M)=-0.316 |
TRPM1 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_014954 {REF} {Length: 4595} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.3]; Ankyrin repeats (many copies) [PF13637.8, score=58.9]; Ankyrin repeats (many copies) [PF13857.8, score=52.6]; Ion transport protein [PF00520.33, score=47.9]; Ankyrin repeat [PF13606.8, score=39.1]; Ankyrin repeat [PF00023.32, score=35.0]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=168, Expect=2e-41]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=168, Expect=1e-41]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=160, Expect=3e-39]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=163, Expect=3e-40]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=160, Expect=4e-39]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=125, Expect=1e-28]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=90.9, Expect=4e-18]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=188, Expect=1e-48]} {RNA1509_3562} {RNA1310_2118.1} {RNA815_362.1} |
| 6. | MligTC455_24409 | 158 | 3.3 | Mlig455_028615 | Neo: - Age: - |
NFIA | 0.951 | - | - | - | - | 0.951 | - | Mlig455_028615 {REF} {Length: 5700} {Human: ENSG00000162599, NFIA, nuclear factor I A, [RH, Score=97.4, Expect=3e-20]; ENSG00000147862, NFIB, nuclear factor I B, [RH, Score=97.1, Expect=6e-20]} {Mouse: ENSMUSG00000028565, Nfia, nuclear factor I/A, [RH, Score=97.4, Expect=2e-20]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [RH, Score=96.7, Expect=3e-20]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [Score=101, Expect=1e-21]} {Smed: dd_Smed_v6_7403_0_1, dd_Smed_v6_7403_0_1, [RH, Score=170, Expect=4e-43]} {RNA1509_25355, RNA1509_44347} {RNA1310_4670.1, RNA1509_25355, RNA1509_44347} {RNA1509_25355, RNA1509_44347, RNA815_17090} |
| 7. | MligTC455_44893 | 215 | 4.47 | Mlig455_020672 | Neo: Irradiation Age: - |
SMARCC2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_020672 {REF} {Length: 2246} {TRANSSPLICED} {Pfam: SWIRM domain [PF04433.19, score=107.7]; SWIRM-associated region 1 [PF16495.7, score=79.7]; SWIRM-associated domain at the C-terminal [PF16498.7, score=49.2]; Myb-like DNA-binding domain [PF00249.33, score=42.7]; Myb-like DNA-binding domain [PF13921.8, score=28.7]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [RH, Score=450, Expect=3e-144]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [RH, Score=451, Expect=8e-146]} {Dmel: FBgn0002783, mor, moira, [RH, Score=339, Expect=3e-103]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [RH, Score=331, Expect=1e-103]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [RH, Score=405, Expect=2e-127]} {RNA1509_39768, RNA1509_54926} {RNA1310_5494.1, RNA1509_39768, RNA1509_54926} {RNA1509_39768, RNA1509_54926, RNA815_8217} |
| 8. | MligTC455_49363 | 219 | 4.57 | Mlig455_044175 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_044175 {REF} {Length: 1460} {TRANSSPLICED} {Pfam: Transmembrane Fragile-X-F protein [PF10269.11, score=39.2]} {Dmel: FBgn0066303, CG33932, [RH, Score=56.6, Expect=1e-10]} {Smed: dd_Smed_v6_11722_0_1, dd_Smed_v6_11722_0_1, [RH, Score=60.8, Expect=2e-12]} {RNA1509_29093} {RNA1310_44233, RNA1509_29093} {RNA1509_29093, RNA815_22419} |
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