Data search
Results for MligTC455_24409
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24409 | 158 | 3.30 | Mlig455_028615 | Neo: - Age: - |
NFIA | Mlig455_028615 {REF} {Length: 5700} {Human: ENSG00000162599, NFIA, nuclear factor I A, [RH, Score=97.4, Expect=3e-20]; ENSG00000147862, NFIB, nuclear factor I B, [RH, Score=97.1, Expect=6e-20]} {Mouse: ENSMUSG00000028565, Nfia, nuclear factor I/A, [RH, Score=97.4, Expect=2e-20]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [RH, Score=96.7, Expect=3e-20]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [Score=101, Expect=1e-21]} {Smed: dd_Smed_v6_7403_0_1, dd_Smed_v6_7403_0_1, [RH, Score=170, Expect=4e-43]} {RNA1509_25355, RNA1509_44347} {RNA1310_4670.1, RNA1509_25355, RNA1509_44347} {RNA1509_25355, RNA1509_44347, RNA815_17090} |
Cumulative graph for MligTC455_24409
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.161 | 2.504 | 0.42620 | 1.00000 | |
| RegionR2 | 0.606 | 2.504 | 0.56932 | 0.93015 | |
| RegionR3 | 0.111 | 2.504 | 0.81288 | 1.00000 | |
| RegionR4 | 2.053 | 2.504 | 0.02591 | 0.12244 | |
| RegionR5 | 1.511 | 2.504 | 0.04138 | 0.16350 | |
| RegionR6 | 0.285 | 2.504 | 0.73362 | 1.00000 | |
| RegionR7 | 0.98 | 2.504 | 0.39355 | 1.00000 | |
| RegionR8 | -1.384 | 2.504 | 0.99577 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.413 | 2.504 | 0.28279 | 0.98260 | |
| RegenerationR2 | -0.206 | 2.504 | 0.68904 | 0.95223 | |
| RegenerationR3 | 0.593 | 2.504 | 0.35376 | 0.77276 | |
| RegenerationR4 | -0.446 | 2.504 | 0.47291 | 0.85514 | |
| RegenerationR5 | -0.162 | 2.504 | 0.74619 | 0.97076 | |
| RegenerationR6 | 0.391 | 2.504 | 0.56548 | 0.84886 | |
| RegenerationBL | 0.4 | 2.504 | 0.70342 | 1.00000 | |
| RegenerationTP | -0.941 | 2.504 | 0.54887 | 0.93219 |
Genes with expression patterns similar to MligTC455_24409
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24409 | 158 | 3.3 | Mlig455_028615 | Neo: - Age: - |
NFIA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028615 {REF} {Length: 5700} {Human: ENSG00000162599, NFIA, nuclear factor I A, [RH, Score=97.4, Expect=3e-20]; ENSG00000147862, NFIB, nuclear factor I B, [RH, Score=97.1, Expect=6e-20]} {Mouse: ENSMUSG00000028565, Nfia, nuclear factor I/A, [RH, Score=97.4, Expect=2e-20]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [RH, Score=96.7, Expect=3e-20]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [Score=101, Expect=1e-21]} {Smed: dd_Smed_v6_7403_0_1, dd_Smed_v6_7403_0_1, [RH, Score=170, Expect=4e-43]} {RNA1509_25355, RNA1509_44347} {RNA1310_4670.1, RNA1509_25355, RNA1509_44347} {RNA1509_25355, RNA1509_44347, RNA815_17090} |
| 2. | MligTC455_24410 | 127 | 2.64 | Mlig455_028637 | Neo: - Age: - |
4.827 | 0.984 | 0.970 | 0.972 | 0.948 | - | 0.953 | Mlig455_028637 {REF} {Length: 702} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_44347} {RNA1310_44746} {RNA815_28549} | |
| 3. | MligTC455_20512 | 247 | 5.16 | Mlig455_008861 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.781 Region-enriched R4: 1.961/0.01551 |
RPA1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_008861 {REF} {Length: 2393} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=152.9]; Replication protein A OB domain [PF16900.7, score=113.5]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=57.7]; OB-fold nucleic acid binding domain [PF01336.27, score=53.0]; Cell division control protein 24, OB domain 3 [PF17244.4, score=29.2]} {Human: ENSG00000132383, RPA1, replication protein A1, [RH, Score=484, Expect=2e-164]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [RH, Score=476, Expect=3e-161]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [RH, Score=439, Expect=4e-147]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [RH, Score=218, Expect=3e-62]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [RH, Score=415, Expect=1e-138]} {RNA1509_51558} {RNA1310_7820.2} {RNA815_3419} |
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