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Results for MligTC455_20567

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20567 660 13.75 Mlig455_008531

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.264

Region-enriched R5: 1.258/0.00131
Region-enriched R4: 1.233/0.01796

 TARDBP Mlig455_008531 {REF} {Length: 4468} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=59.6]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.4]} {Human: ENSG00000120948, TARDBP, TAR DNA binding protein, [Score=122, Expect=2e-29]; ENSG00000277726, AL109811.4, novel protein, [Score=121, Expect=5e-30]} {Mouse: ENSMUSG00000041459, Tardbp, TAR DNA binding protein, [Score=116, Expect=1e-27]} {Dmel: FBgn0025790, TBPH, TAR DNA-binding protein-43 homolog, [Score=122, Expect=1e-30]} {Celegans: WBGene00006514, tdp-1, Tar DNA-binding protein homolog 1, [Score=101, Expect=6e-23]} {Smed: dd_Smed_v6_10863_0_1, dd_Smed_v6_10863_0_1, [Score=95.5, Expect=5e-21]} {RNA1509_16169} {RNA1310_17479.1} {RNA815_26518.1}

Cumulative graph for MligTC455_20567

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.3 4.069 0.76615 1.00000
RegionR2 -0.121 4.069 0.80064 1.00000
RegionR3 -0.003 4.069 0.99534 1.00000
RegionR4 1.233 4.069 0.00201 0.01796
RegionR5 1.258 4.069 0.00007 0.00131
RegionR6 0.411 4.069 0.28185 0.87183
RegionR7 -0.671 4.069 0.20667 0.81811
RegionR8 -1.807 4.069 0.01486 0.23764

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.754 4.069 0.17832 0.91945
RegenerationR2 -0.08 4.069 0.83752 1.00000
RegenerationR3 -0.107 4.069 0.80211 0.98322
RegenerationR4 -0.721 4.069 0.08546 0.46099
RegenerationR5 -0.363 4.069 0.32042 0.74387
RegenerationR6 0.345 4.069 0.40990 0.74391
RegenerationBL 1.053 4.069 0.04732 0.24907
RegenerationTP 0.292 4.069 0.68240 1.00000


Genes with expression patterns similar to MligTC455_20567

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20567 660 13.75 Mlig455_008531

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.264

Region-enriched R5: 1.258/0.00131
Region-enriched R4: 1.233/0.01796

 TARDBP 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_008531 {REF} {Length: 4468} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=59.6]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.4]} {Human: ENSG00000120948, TARDBP, TAR DNA binding protein, [Score=122, Expect=2e-29]; ENSG00000277726, AL109811.4, novel protein, [Score=121, Expect=5e-30]} {Mouse: ENSMUSG00000041459, Tardbp, TAR DNA binding protein, [Score=116, Expect=1e-27]} {Dmel: FBgn0025790, TBPH, TAR DNA-binding protein-43 homolog, [Score=122, Expect=1e-30]} {Celegans: WBGene00006514, tdp-1, Tar DNA-binding protein homolog 1, [Score=101, Expect=6e-23]} {Smed: dd_Smed_v6_10863_0_1, dd_Smed_v6_10863_0_1, [Score=95.5, Expect=5e-21]} {RNA1509_16169} {RNA1310_17479.1} {RNA815_26518.1}
2. MligTC455_20566 1384 28.83 Mlig455_008463, Mlig455_008504

Neo: -

Age: -

Region-enriched R5: 1.202/0.00059

 TARDBP 5.412 0.999 0.998 0.835 0.796 0.880 0.904

Mlig455_008463 {REF} {Length: 4305} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=60.4]; Transactive response DNA-binding protein N-terminal domain [PF18694.3, score=50.5]} {Human: ENSG00000120948, TARDBP, TAR DNA binding protein, [Score=149, Expect=3e-41]; ENSG00000277726, AL109811.4, novel protein, [Score=148, Expect=4e-41]} {Mouse: ENSMUSG00000041459, Tardbp, TAR DNA binding protein, [Score=142, Expect=4e-39]} {Dmel: FBgn0025790, TBPH, TAR DNA-binding protein-43 homolog, [Score=148, Expect=5e-41]} {Celegans: WBGene00006514, tdp-1, Tar DNA-binding protein homolog 1, [Score=121, Expect=2e-30]} {Smed: dd_Smed_v6_10863_0_1, dd_Smed_v6_10863_0_1, [Score=112, Expect=2e-27]} {RNA1509_16169} {RNA1310_17479.1, RNA1509_16169} {RNA1509_16169, RNA815_1821.1}

Mlig455_008504 {REF} {Length: 4320} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=61.1]; Transactive response DNA-binding protein N-terminal domain [PF18694.3, score=50.5]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.7]} {Human: ENSG00000120948, TARDBP, TAR DNA binding protein, [Score=147, Expect=8e-41]; ENSG00000277726, AL109811.4, novel protein, [Score=147, Expect=8e-41]} {Mouse: ENSMUSG00000041459, Tardbp, TAR DNA binding protein, [Score=142, Expect=9e-39]} {Dmel: FBgn0025790, TBPH, TAR DNA-binding protein-43 homolog, [Score=147, Expect=1e-40]} {Celegans: WBGene00006514, tdp-1, Tar DNA-binding protein homolog 1, [Score=119, Expect=8e-30]} {Smed: dd_Smed_v6_10863_0_1, dd_Smed_v6_10863_0_1, [Score=111, Expect=4e-27]} {RNA1509_16169, RNA1509_22053, RNA1509_34373, RNA1509_35108, RNA1509_45413} {RNA1310_17479.1, RNA1509_22053, RNA1509_34373, RNA1509_35108, RNA1509_45413} {RNA1509_22053, RNA1509_34373, RNA1509_35108, RNA1509_45413, RNA815_1821.1}
3. MligTC455_25461 312 6.5 Mlig455_017948

Neo: -

Age: -

Region-enriched R5: 3.863/0.00000

 TCEANC2 2.537 0.793 - 0.969 - 0.775 - Mlig455_017948 {REF} {Length: 1856} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=28.6]} {Human: ENSG00000116205, TCEANC2, transcription elongation factor A N-terminal and central domain containing 2, [RH, Score=90.1, Expect=1e-21]} {Mouse: ENSMUSG00000028619, Tceanc2, transcription elongation factor A (SII) N-terminal and central domain containing 2, [RH, Score=83.6, Expect=2e-19]} {Smed: dd_Smed_v6_22739_0_1, dd_Smed_v6_22739_0_1, [Score=47.4, Expect=2e-06]} {RNA1509_13086} {RNA1310_41560, RNA1509_13086} {RNA1509_13086, RNA815_7433}
4. MligTC455_08391 328 6.84 Mlig455_022884

Neo: Irradiation

Age: -

Region-enriched R5: 2.720/0.00000

 METTL5 1.808 0.858 - - - 0.950 - Mlig455_022884 {REF} {Length: 1211} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13649.8, score=39.1]; Methyltransferase small domain [PF05175.16, score=30.5]; Methyltransferase domain [PF13847.8, score=29.9]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=29.0]; Methyltransferase domain [PF08241.14, score=24.9]; N-6 DNA Methylase [PF02384.18, score=22.8]; Conserved hypothetical protein 95 [PF03602.17, score=20.0]; Putative RNA methylase family UPF0020 [PF01170.20, score=19.4]} {Human: ENSG00000138382, METTL5, methyltransferase like 5, [RH, Score=118, Expect=5e-32]} {Mouse: ENSMUSG00000051730, Mettl5, methyltransferase like 5, [RH, Score=119, Expect=1e-32]} {Dmel: FBgn0036856, CG9666, [RH, Score=111, Expect=1e-29]} {Celegans: WBGene00008008, C38D4.9, [RH, Score=89.0, Expect=4e-21]} {Smed: dd_Smed_v6_10068_0_1, dd_Smed_v6_10068_0_1, [RH, Score=146, Expect=3e-43]} {RNA1509_19099, RNA1509_32340} {RNA1310_26048, RNA1509_19099, RNA1509_32340} {RNA1509_19099, RNA1509_32340, RNA815_13141}
5. MligTC455_43605 498 10.38 Mlig455_053066

Neo: Int S/G2/M

Age: Up-Up-Down

Region-enriched R4: 1.454/0.01496
Region-enriched R5: 1.366/0.00105

 PIM3 1.659 - 0.705 - - 0.954 - Mlig455_053066 {REF} {Length: 2730} {Pfam: Protein kinase domain [PF00069.27, score=195.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=69.3]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=24.3]; Kinase-like [PF14531.8, score=23.9]} {Human: ENSG00000198355, PIM3, Pim-3 proto-oncogene, serine/threonine kinase, [Score=255, Expect=4e-82]; ENSG00000137193, PIM1, Pim-1 proto-oncogene, serine/threonine kinase, [Score=252, Expect=4e-81]} {Mouse: ENSMUSG00000024014, Pim1, proviral integration site 1, [Score=253, Expect=9e-82]; ENSMUSG00000035828, Pim3, proviral integration site 3, [Score=251, Expect=5e-81]} {Dmel: FBgn0034950, Pask, PAS kinase, [Score=134, Expect=7e-34]} {Celegans: WBGene00004183, prk-2, Serine/threonine-protein kinase prk-2, [RH, Score=226, Expect=4e-70]} {Smed: dd_Smed_v6_4012_0_1, dd_Smed_v6_4012_0_1, [RH, Score=267, Expect=3e-86]} {RNA1509_4423} {RNA1310_9385} {RNA815_6856}
6. MligTC455_46002 717 14.94 Mlig455_051100

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 1.188/0.00025

 0.974 - - - - - 0.974 Mlig455_051100 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=28.0]} {RNA1509_25661, RNA1509_32445, RNA1509_50336} {RNA1310_38539.1, RNA1509_25661, RNA1509_32445, RNA1509_50336} {RNA1509_25661, RNA1509_32445, RNA1509_50336, RNA815_41179}
7. MligTC455_30363 240 5 Mlig455_011101

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.846

 0.958 - - - - 0.958 - Mlig455_011101 {REF} {Length: 2013} {NoTransDecoderORF} {RNA1509_33897} {RNA1310_18647} {RNA815_14645}

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