Data search
Results for MligTC455_20581
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20581 | 698 | 14.54 | Mlig455_044204 | Neo: Irradiation Age: - |
BRDT | Mlig455_044204 {REF} {Length: 4392} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=113.0]; Bromodomain extra-terminal - transcription regulation [PF17035.7, score=91.2]} {Human: ENSG00000137948, BRDT, bromodomain testis associated, [RH, Score=229, Expect=2e-62]} {Mouse: ENSMUSG00000024002, Brd4, bromodomain containing 4, [RH, Score=128, Expect=2e-30]; ENSMUSG00000024335, Brd2, bromodomain containing 2, [RH, Score=127, Expect=1e-29]} {Dmel: FBgn0004656, fs(1)h, female sterile (1) homeotic, [RH, Score=126, Expect=4e-29]} {Celegans: WBGene00022473, bet-1, Bromodomain-containing protein bet-1, [RH, Score=195, Expect=1e-51]} {Smed: dd_Smed_v6_5367_0_1, dd_Smed_v6_5367_0_1, [Score=285, Expect=1e-84]} {RNA1509_49731, RNA1509_4992, RNA1509_53742, RNA1509_59054} {RNA1310_1828.1, RNA1509_49731, RNA1509_53742, RNA1509_59054} {RNA1509_49731, RNA1509_53742, RNA1509_59054, RNA815_4037.1} |
Cumulative graph for MligTC455_20581
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.644 | 4.245 | 0.22542 | 0.86922 | |
| RegionR2 | 0.179 | 4.245 | 0.73662 | 1.00000 | |
| RegionR3 | -0.242 | 4.245 | 0.60750 | 1.00000 | |
| RegionR4 | 0.923 | 4.245 | 0.05107 | 0.19557 | |
| RegionR5 | 0.765 | 4.245 | 0.04402 | 0.17093 | |
| RegionR6 | 0.392 | 4.245 | 0.36831 | 0.94953 | |
| RegionR7 | 0.583 | 4.245 | 0.26857 | 0.89972 | |
| RegionR8 | -0.957 | 4.245 | 0.25459 | 0.87386 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.898 | 4.245 | 0.25565 | 0.96756 | |
| RegenerationR2 | 0.15 | 4.245 | 0.72472 | 0.96383 | |
| RegenerationR3 | 0.425 | 4.245 | 0.36992 | 0.78395 | |
| RegenerationR4 | -0.627 | 4.245 | 0.17821 | 0.61796 | |
| RegenerationR5 | -0.005 | 4.245 | 0.99061 | 1.00000 | |
| RegenerationR6 | 0.409 | 4.245 | 0.35882 | 0.70331 | |
| RegenerationBL | 0.965 | 4.245 | 0.05886 | 0.28159 | |
| RegenerationTP | 0.289 | 4.245 | 0.65667 | 0.99209 |
Genes with expression patterns similar to MligTC455_20581
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20581 | 698 | 14.54 | Mlig455_044204 | Neo: Irradiation Age: - |
BRDT | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044204 {REF} {Length: 4392} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=113.0]; Bromodomain extra-terminal - transcription regulation [PF17035.7, score=91.2]} {Human: ENSG00000137948, BRDT, bromodomain testis associated, [RH, Score=229, Expect=2e-62]} {Mouse: ENSMUSG00000024002, Brd4, bromodomain containing 4, [RH, Score=128, Expect=2e-30]; ENSMUSG00000024335, Brd2, bromodomain containing 2, [RH, Score=127, Expect=1e-29]} {Dmel: FBgn0004656, fs(1)h, female sterile (1) homeotic, [RH, Score=126, Expect=4e-29]} {Celegans: WBGene00022473, bet-1, Bromodomain-containing protein bet-1, [RH, Score=195, Expect=1e-51]} {Smed: dd_Smed_v6_5367_0_1, dd_Smed_v6_5367_0_1, [Score=285, Expect=1e-84]} {RNA1509_49731, RNA1509_4992, RNA1509_53742, RNA1509_59054} {RNA1310_1828.1, RNA1509_49731, RNA1509_53742, RNA1509_59054} {RNA1509_49731, RNA1509_53742, RNA1509_59054, RNA815_4037.1} |
| 2. | MligTC455_52305 | 908 | 18.92 | Mlig455_067955 | Neo: - Age: - Regeneration-upregulated BL: 2.181 Regeneration-enriched BL: 2.181 |
1.865 | - | - | - | 0.904 | 0.961 | - | Mlig455_067955 {REF} {Length: 2395} {RNA1509_46851} {RNA1310_2054} {RNA815_12410} | |
| 3. | MligTC455_48254 | 1750 | 36.46 | Mlig455_040775, Mlig455_064610 | Neo: - Age: - |
PRDM16 | 1.738 | - | - | - | - | 0.981 | 0.757 | Mlig455_040775 {REF} {Length: 2891} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=63.8]; C2H2-type zinc finger [PF13894.8, score=60.4]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=32.7]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=31.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=28.7]; Zinc-finger double domain [PF13465.8, score=28.2]; Zinc-finger of C2H2 type [PF12874.9, score=23.5]; zinc-finger of a C2HC-type [PF13913.8, score=20.1]; C2H2-type zinc finger [PF13912.8, score=20.0]} {Human: ENSG00000142611, PRDM16, PR/SET domain 16, [Score=76.3, Expect=4e-14]; ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [Score=75.1, Expect=1e-13]} {Mouse: ENSMUSG00000039410, Prdm16, PR domain containing 16, [Score=76.3, Expect=3e-14]; ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [Score=75.5, Expect=4e-14]} {Dmel: FBgn0011236, ken, ken and barbie, [RH, Score=79.7, Expect=1e-15]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=65.9, Expect=1e-11]} {Smed: dd_Smed_v6_77767_0_1, dd_Smed_v6_77767_0_1, [Score=62.0, Expect=2e-11]} {RNA1509_17843, RNA1509_43575} {RNA1310_2290, RNA1509_17843, RNA1509_43575} {RNA1509_17843, RNA1509_43575, RNA815_21577.2} Mlig455_064610 {REF} {Length: 2741} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=63.8]; C2H2-type zinc finger [PF13894.8, score=60.4]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=32.7]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=31.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=28.7]; Zinc-finger double domain [PF13465.8, score=28.2]; Zinc-finger of C2H2 type [PF12874.9, score=23.5]; zinc-finger of a C2HC-type [PF13913.8, score=20.1]; C2H2-type zinc finger [PF13912.8, score=20.0]} {Human: ENSG00000142611, PRDM16, PR/SET domain 16, [Score=76.3, Expect=5e-14]; ENSG00000085276, MECOM, MDS1 and EVI1 complex locus, [Score=75.1, Expect=1e-13]} {Mouse: ENSMUSG00000039410, Prdm16, PR domain containing 16, [Score=76.3, Expect=3e-14]; ENSMUSG00000027684, Mecom, MDS1 and EVI1 complex locus, [Score=75.5, Expect=4e-14]} {Dmel: FBgn0011236, ken, ken and barbie, [RH, Score=79.7, Expect=1e-15]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=65.9, Expect=1e-11]} {Smed: dd_Smed_v6_77767_0_1, dd_Smed_v6_77767_0_1, [Score=62.0, Expect=1e-11]} {RNA1509_17843} {RNA1310_2290} {RNA815_21577.2} |
| 4. | MligTC455_16605 | 1107 | 23.07 | Mlig455_028469, Mlig455_028494 | Neo: - Age: - Regeneration-upregulated BL: 1.767 Regeneration-enriched BL: 1.767 |
CUL2 | 1.727 | - | - | - | 0.776 | 0.951 | - | Mlig455_028469 {REF} {Length: 2787} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=470.8]; Cullin protein neddylation domain [PF10557.11, score=85.4]} {Human: ENSG00000108094, CUL2, cullin 2, [RH, Score=514, Expect=2e-172]} {Mouse: ENSMUSG00000024231, Cul2, cullin 2, [RH, Score=513, Expect=4e-172]} {Dmel: FBgn0032956, Cul2, Cullin 2, [RH, Score=451, Expect=2e-148]} {Celegans: WBGene00000837, cul-2, Cullin-2, [RH, Score=413, Expect=1e-132]} {Smed: dd_Smed_v6_5180_0_1, dd_Smed_v6_5180_0_1, [RH, Score=357, Expect=8e-112]} {RNA1509_36603, RNA1509_5209} {RNA1310_6474, RNA1509_36603, RNA1509_5209} {RNA1509_36603, RNA1509_5209, RNA815_1991} Mlig455_028494 {REF} {Length: 2798} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=467.6]; Cullin protein neddylation domain [PF10557.11, score=85.3]} {Human: ENSG00000108094, CUL2, cullin 2, [RH, Score=514, Expect=2e-172]} {Mouse: ENSMUSG00000024231, Cul2, cullin 2, [RH, Score=514, Expect=2e-172]} {Dmel: FBgn0032956, Cul2, Cullin 2, [RH, Score=450, Expect=7e-148]} {Celegans: WBGene00000837, cul-2, Cullin-2, [RH, Score=415, Expect=3e-133]} {Smed: dd_Smed_v6_5180_0_1, dd_Smed_v6_5180_0_1, [RH, Score=354, Expect=9e-111]} {RNA1509_24244, RNA1509_36603} {RNA1310_6474, RNA1509_24244} {RNA1509_24244, RNA815_1991} |
| 5. | MligTC455_18591 | 1024 | 21.33 | Mlig455_001050 | Neo: - Age: logFC(26M/2M)=0.197 |
VPS29 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_001050 {REF} {Length: 2720} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase superfamily domain [PF12850.9, score=89.4]; Calcineurin-like phosphoesterase [PF00149.30, score=26.6]} {Human: ENSG00000111237, VPS29, VPS29, retromer complex component, [RH, Score=276, Expect=2e-95]} {Mouse: ENSMUSG00000029462, Vps29, VPS29 retromer complex component, [RH, Score=278, Expect=7e-96]} {Dmel: FBgn0031310, Vps29, Vacuolar protein sorting 29, [RH, Score=257, Expect=4e-88]} {Celegans: WBGene00014234, vps-29, Vacuolar protein sorting-associated protein 29, [RH, Score=246, Expect=1e-83]} {Smed: dd_Smed_v6_1727_0_1, dd_Smed_v6_1727_0_1, [RH, Score=278, Expect=2e-96]} {RNA1509_15958, RNA1509_27578, RNA1509_29968, RNA1509_48195} {RNA1310_19709, RNA1509_15958, RNA1509_27578, RNA1509_29968, RNA1509_48195} {RNA1509_15958, RNA1509_27578, RNA1509_29968, RNA1509_48195, RNA815_19424.1} |
| 6. | MligTC455_41312 | 916 | 19.09 | Mlig455_013368 | Neo: Irradiation Age: - Region-enriched R4: 3.067/0.00000 |
CFL2 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_013368 {REF} {Length: 1349} {TRANSSPLICED} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=119.0]} {Human: ENSG00000165410, CFL2, cofilin 2, [RH, Score=85.1, Expect=3e-21]; ENSG00000172757, CFL1, cofilin 1, [RH, Score=84.3, Expect=7e-21]; ENSG00000125868, DSTN, destrin, actin depolymerizing factor, [RH, Score=82.4, Expect=4e-20]} {Mouse: ENSMUSG00000062929, Cfl2, cofilin 2, muscle, [RH, Score=85.1, Expect=2e-21]; ENSMUSG00000056201, Cfl1, cofilin 1, non-muscle, [RH, Score=83.6, Expect=7e-21]} {Celegans: WBGene00006794, unc-60, Actin-depolymerizing factor 2, isoform c, [RH, Score=74.7, Expect=1e-17]} {Smed: dd_Smed_v6_260_0_1, dd_Smed_v6_260_0_1, [Score=94.0, Expect=1e-25]} {RNA1509_16555, RNA1509_9929} {RNA1310_23323.1, RNA1509_16555, RNA1509_9929} {RNA1509_16555, RNA1509_9929, RNA815_9903} |
| 7. | MligTC455_16763 | 913 | 19.02 | Mlig455_029100, Mlig455_029120 | Neo: - Age: - |
GPHN | 0.955 | - | - | - | - | 0.955 | - | Mlig455_029100 {REF} {Length: 3025} {Pfam: Probable molybdopterin binding domain [PF00994.26, score=185.8]; MoeA N-terminal region (domain I and II) [PF03453.19, score=143.0]; MoeA C-terminal region (domain IV) [PF03454.17, score=32.7]} {Human: ENSG00000171723, GPHN, gephyrin, [RH, Score=456, Expect=4e-151]} {Mouse: ENSMUSG00000047454, Gphn, gephyrin, [RH, Score=408, Expect=3e-132]} {Dmel: FBgn0000316, cin, cinnamon, [RH, Score=368, Expect=6e-119]} {Celegans: WBGene00003384, moc-1, MOlybdenum Cofactor biosynthesis, [RH, Score=235, Expect=2e-70]} {Smed: dd_Smed_v6_10498_0_1, dd_Smed_v6_10498_0_1, [RH, Score=457, Expect=9e-154]} {RNA1509_48127, RNA1509_57639} {RNA1310_8350.1, RNA1509_48127, RNA1509_57639} {RNA1509_48127, RNA1509_57639, RNA815_2187.1} Mlig455_029120 {REF} {Length: 3023} {Pfam: Probable molybdopterin binding domain [PF00994.26, score=185.8]; MoeA N-terminal region (domain I and II) [PF03453.19, score=143.0]; MoeA C-terminal region (domain IV) [PF03454.17, score=32.7]} {Human: ENSG00000171723, GPHN, gephyrin, [RH, Score=456, Expect=4e-151]} {Mouse: ENSMUSG00000047454, Gphn, gephyrin, [RH, Score=408, Expect=3e-132]} {Dmel: FBgn0000316, cin, cinnamon, [RH, Score=368, Expect=6e-119]} {Celegans: WBGene00003384, moc-1, MOlybdenum Cofactor biosynthesis, [RH, Score=235, Expect=2e-70]} {Smed: dd_Smed_v6_10498_0_1, dd_Smed_v6_10498_0_1, [RH, Score=457, Expect=9e-154]} {RNA1509_48127} {RNA1310_8350.1} {RNA815_2187.1} |