Data search
Results for MligTC455_41312
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41312 | 916 | 19.09 | Mlig455_013368 | Neo: Irradiation Age: - Region-enriched R4: 3.067/0.00000 |
CFL2 | Mlig455_013368 {REF} {Length: 1349} {TRANSSPLICED} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=119.0]} {Human: ENSG00000165410, CFL2, cofilin 2, [RH, Score=85.1, Expect=3e-21]; ENSG00000172757, CFL1, cofilin 1, [RH, Score=84.3, Expect=7e-21]; ENSG00000125868, DSTN, destrin, actin depolymerizing factor, [RH, Score=82.4, Expect=4e-20]} {Mouse: ENSMUSG00000062929, Cfl2, cofilin 2, muscle, [RH, Score=85.1, Expect=2e-21]; ENSMUSG00000056201, Cfl1, cofilin 1, non-muscle, [RH, Score=83.6, Expect=7e-21]} {Celegans: WBGene00006794, unc-60, Actin-depolymerizing factor 2, isoform c, [RH, Score=74.7, Expect=1e-17]} {Smed: dd_Smed_v6_260_0_1, dd_Smed_v6_260_0_1, [Score=94.0, Expect=1e-25]} {RNA1509_16555, RNA1509_9929} {RNA1310_23323.1, RNA1509_16555, RNA1509_9929} {RNA1509_16555, RNA1509_9929, RNA815_9903} |
Cumulative graph for MligTC455_41312
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.481 | 4.611 | 0.01473 | 0.34196 | |
| RegionR2 | 0.583 | 4.611 | 0.51994 | 0.89468 | |
| RegionR3 | 0.369 | 4.611 | 0.65483 | 1.00000 | |
| RegionR4 | 3.067 | 4.611 | 0.00000 | 0.00000 | |
| RegionR5 | 0.679 | 4.611 | 0.40337 | 0.76112 | |
| RegionR6 | 0.291 | 4.611 | 0.70734 | 1.00000 | |
| RegionR7 | 1.261 | 4.611 | 0.10064 | 0.60583 | |
| RegionR8 | 1.231 | 4.611 | 0.16284 | 0.73060 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.557 | 4.611 | 0.99995 | 1.00000 | |
| RegenerationR2 | -0.23 | 4.611 | 0.59140 | 0.91143 | |
| RegenerationR3 | 0.384 | 4.611 | 0.42007 | 0.81507 | |
| RegenerationR4 | -1.474 | 4.611 | 0.00133 | 0.04284 | |
| RegenerationR5 | 0.276 | 4.611 | 0.52493 | 0.87214 | |
| RegenerationR6 | 0.596 | 4.611 | 0.21329 | 0.55704 | |
| RegenerationBL | 0.351 | 4.611 | 0.45740 | 0.82503 | |
| RegenerationTP | 0.192 | 4.611 | 0.71274 | 1.00000 |
Genes with expression patterns similar to MligTC455_41312
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41312 | 916 | 19.09 | Mlig455_013368 | Neo: Irradiation Age: - Region-enriched R4: 3.067/0.00000 |
CFL2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_013368 {REF} {Length: 1349} {TRANSSPLICED} {Pfam: Cofilin/tropomyosin-type actin-binding protein [PF00241.22, score=119.0]} {Human: ENSG00000165410, CFL2, cofilin 2, [RH, Score=85.1, Expect=3e-21]; ENSG00000172757, CFL1, cofilin 1, [RH, Score=84.3, Expect=7e-21]; ENSG00000125868, DSTN, destrin, actin depolymerizing factor, [RH, Score=82.4, Expect=4e-20]} {Mouse: ENSMUSG00000062929, Cfl2, cofilin 2, muscle, [RH, Score=85.1, Expect=2e-21]; ENSMUSG00000056201, Cfl1, cofilin 1, non-muscle, [RH, Score=83.6, Expect=7e-21]} {Celegans: WBGene00006794, unc-60, Actin-depolymerizing factor 2, isoform c, [RH, Score=74.7, Expect=1e-17]} {Smed: dd_Smed_v6_260_0_1, dd_Smed_v6_260_0_1, [Score=94.0, Expect=1e-25]} {RNA1509_16555, RNA1509_9929} {RNA1310_23323.1, RNA1509_16555, RNA1509_9929} {RNA1509_16555, RNA1509_9929, RNA815_9903} |
| 2. | MligTC455_45771 | 1306 | 27.21 | Mlig455_005318, Mlig455_067546 | Neo: - Age: - Region-enriched R4: 1.602/0.00482 |
HTATSF1 | 1.713 | - | 0.762 | - | - | - | 0.951 | Mlig455_005318 {REF} {Length: 1792} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.2]} {Human: ENSG00000102241, HTATSF1, HIV-1 Tat specific factor 1, [Score=219, Expect=2e-62]} {Mouse: ENSMUSG00000067873, Htatsf1, HIV TAT specific factor 1, [RH, Score=218, Expect=2e-62]} {Dmel: FBgn0037081, barc, barricade, [RH, Score=214, Expect=9e-63]} {Celegans: WBGene00022025, Y65B4A.1, [RH, Score=197, Expect=2e-57]} {Smed: dd_Smed_v6_4508_0_1, dd_Smed_v6_4508_0_1, [RH, Score=247, Expect=2e-76]} {RNA1509_27644} {RNA1310_15527.1} {RNA815_5704} Mlig455_067546 {REF} {Length: 1779} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.2]} {Human: ENSG00000102241, HTATSF1, HIV-1 Tat specific factor 1, [RH, Score=217, Expect=7e-62]} {Mouse: ENSMUSG00000067873, Htatsf1, HIV TAT specific factor 1, [RH, Score=216, Expect=6e-62]} {Dmel: FBgn0037081, barc, barricade, [RH, Score=190, Expect=1e-53]} {Celegans: WBGene00022025, Y65B4A.1, [RH, Score=196, Expect=5e-57]} {Smed: dd_Smed_v6_4508_0_1, dd_Smed_v6_4508_0_1, [RH, Score=247, Expect=2e-76]} {RNA1509_16989} {RNA1310_15527.1} {RNA815_5704} |
| 3. | MligTC455_34453 | 24 | 0.5 | Mlig455_052246 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 3.366/0.04841 |
PPP1CA | 1.695 | - | 0.953 | 0.742 | - | - | - | Mlig455_052246 {REF} {Length: 1412} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=85.2]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=163, Expect=3e-48]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=161, Expect=2e-47]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=158, Expect=3e-46]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=163, Expect=2e-48]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=163, Expect=2e-48]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=160, Expect=4e-47]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=158, Expect=2e-46]} {Dmel: FBgn0005779, PpD6, Protein phosphatase D6, [Score=167, Expect=7e-50]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [Score=166, Expect=7e-50]} {Smed: dd_Smed_v6_2425_0_1, dd_Smed_v6_2425_0_1, [Score=160, Expect=3e-48]} {RNA1509_8839} {RNA1310_6142.1} {RNA815_11327.2} |
| 4. | MligTC455_18551 | 63 | 1.32 | Mlig455_033246 | Neo: Irradiation Age: - |
1.686 | - | 0.955 | 0.731 | - | - | - | Mlig455_033246 {REF} {Length: 1613} {RNA1509_32165} {RNA1310_17890} {RNA815_5462.1} | |
| 5. | MligTC455_11000 | 154 | 3.21 | Mlig455_009433 | Neo: Irradiation |
1.667 | - | 0.955 | 0.712 | - | - | - | Mlig455_009433 {REF} {Length: 3324} {RNA1509_45837} {RNA1310_3482.1, RNA1509_45837} {RNA1509_45837, RNA815_5108.1} | |
| 6. | MligTC455_04352 | 55 | 1.14 | Mlig455_039494 | Neo: - Age: Up-Down-Down |
1.661 | - | 0.958 | 0.703 | - | - | - | Mlig455_039494 {REF} {Length: 936} {RNA1509_52330} {RNA1310_54745} {RNA815_39086} | |
| 7. | MligTC455_41885 | 78 | 1.61 | Mlig455_004165 | Neo: Germline Age: Up-Down-Down, logFC(26M/2M)=-0.390 Region-specific R4: 7.361 Region-enriched R4: 4.826/0.00765 |
1.654 | - | 0.950 | 0.704 | - | - | - | Mlig455_004165 {REF} {Length: 3286} {Smed: dd_Smed_v6_22487_0_1, dd_Smed_v6_22487_0_1, [Score=75.9, Expect=3e-15]} {RNA1509_14367, RNA1509_16009, RNA1509_47653} {RNA1310_21432, RNA1509_14367, RNA1509_47653} {RNA1509_14367, RNA1509_47653, RNA815_11018} | |
| 8. | MligTC455_20581 | 698 | 14.54 | Mlig455_044204 | Neo: Irradiation Age: - |
BRDT | 0.964 | - | - | - | - | 0.964 | - | Mlig455_044204 {REF} {Length: 4392} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=113.0]; Bromodomain extra-terminal - transcription regulation [PF17035.7, score=91.2]} {Human: ENSG00000137948, BRDT, bromodomain testis associated, [RH, Score=229, Expect=2e-62]} {Mouse: ENSMUSG00000024002, Brd4, bromodomain containing 4, [RH, Score=128, Expect=2e-30]; ENSMUSG00000024335, Brd2, bromodomain containing 2, [RH, Score=127, Expect=1e-29]} {Dmel: FBgn0004656, fs(1)h, female sterile (1) homeotic, [RH, Score=126, Expect=4e-29]} {Celegans: WBGene00022473, bet-1, Bromodomain-containing protein bet-1, [RH, Score=195, Expect=1e-51]} {Smed: dd_Smed_v6_5367_0_1, dd_Smed_v6_5367_0_1, [Score=285, Expect=1e-84]} {RNA1509_49731, RNA1509_4992, RNA1509_53742, RNA1509_59054} {RNA1310_1828.1, RNA1509_49731, RNA1509_53742, RNA1509_59054} {RNA1509_49731, RNA1509_53742, RNA1509_59054, RNA815_4037.1} |
| 9. | MligTC455_39255 | 38 | 0.8 | Mlig455_029212 | Neo: Irradiation Age: Up-Down-Down |
0.959 | - | 0.959 | - | - | - | - | Mlig455_029212 {REF} {Length: 1355} {RNA1509_17456} {RNA1310_949.2} {RNA815_31822} | |
| 10. | MligTC455_06477 | 161 | 3.36 | Mlig455_018632 | Neo: Irradiation |
0.955 | - | 0.955 | - | - | - | - | Mlig455_018632 {REF} {Length: 1330} {RNA1509_32397, RNA1509_44075} {RNA1310_27240, RNA1509_32397, RNA1509_44075} {RNA1509_32397, RNA1509_44075, RNA815_37540} | |
| 11. | MligTC455_25811 | 109 | 2.26 | Mlig455_011730, Mlig455_036371, Mlig455_036403, Mlig455_046144, Mlig455_046230, Mlig455_066711 | Neo: Germline Age: - Region-enriched R4: 4.044/0.02558 |
0.955 | - | 0.955 | - | - | - | - | Mlig455_011730 {REF} {Length: 672} {NoTransDecoderORF} {RNA1310_39576.1} {RNA815_25457.3} Mlig455_036371 {REF} {Length: 740} {NoTransDecoderORF} {RNA1310_18367} {RNA815_25457.1} Mlig455_036403 {REF} {Length: 742} {RNA1310_18367} {RNA815_25457.1} Mlig455_046144 {REF} {Length: 956} {RNA1310_18367} {RNA815_25457.2} Mlig455_046230 {REF} {Length: 948} {RNA1310_18367} {RNA815_25457.1} Mlig455_066711 {REF} {Length: 1216} {Pfam: Phage integrase, N-terminal SAM-like domain [PF13495.8, score=20.9]} {RNA1310_18367} {RNA815_25457.1} |
|
| 12. | MligTC455_54293 | 358 | 7.46 | Mlig455_017929 | Neo: - Age: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_017929 {REF} {Length: 671} {NoTransDecoderORF} {RNA1509_24544, RNA1509_24991} {RNA1310_16285.1, RNA1509_24991} {RNA1509_24991, RNA815_22613} | |
| 13. | MligTC455_51571 | 79 | 1.65 | Mlig455_010868 | Neo: Germline Age: Up-Down-Down |
0.954 | - | 0.954 | - | - | - | - | Mlig455_010868 {REF} {Length: 1811} {Pfam: Immunoglobulin domain [PF13927.8, score=33.3]; Immunoglobulin I-set domain [PF07679.18, score=29.3]; Immunoglobulin domain [PF00047.27, score=24.6]; Immunoglobulin domain [PF13895.8, score=24.1]} {Smed: dd_Smed_v6_1827_0_1, dd_Smed_v6_1827_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_18745} {RNA1310_19824} {RNA815_8566} | |
| 14. | MligTC455_30717 | 16 | 0.32 | Mlig455_038408 | Neo: Germline Age: - Region-enriched R4: 6.585/0.04772 |
0.952 | - | 0.952 | - | - | - | - | Mlig455_038408 {REF} {Length: 644} {RNA1509_17401} {RNA1310_63118} {RNA815_22702.2} | |
| 15. | MligTC455_30798 | 161 | 3.35 | Mlig455_067478, Mlig455_067485 | Neo: Germline Age: - |
TCF23 | 0.952 | - | 0.952 | - | - | - | - | Mlig455_067478 {REF} {Length: 1704} {RNA1509_16377} {RNA1310_29593} {RNA815_13904.1} Mlig455_067485 {REF} {Length: 2559} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=39.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.8]} {Human: ENSG00000163792, TCF23, transcription factor 23, [Score=75.5, Expect=2e-15]} {Mouse: ENSMUSG00000006642, Tcf23, transcription factor 23, [Score=73.9, Expect=3e-15]} {Dmel: FBgn0011277, HLH4C, Helix loop helix protein 4C, [Score=49.3, Expect=5e-07]} {Celegans: WBGene00001959, hlh-15, Helix Loop Helix, [Score=45.4, Expect=2e-06]} {Smed: dd_Smed_v6_16070_0_1, dd_Smed_v6_16070_0_1, [Score=53.9, Expect=1e-08]} {RNA1509_16377} {RNA1310_29593} {RNA815_13904.1} |
| 16. | MligTC455_34668 | 65 | 1.35 | Mlig455_034083 | Neo: Irradiation Age: - Region-enriched R4: 3.258/0.04262 |
COL5A2 | 0.951 | - | 0.951 | - | - | - | - | Mlig455_034083 {REF} {Length: 11888} {Human: ENSG00000204262, COL5A2, collagen type V alpha 2 chain, [Score=60.5, Expect=8e-08]} {Celegans: WBGene00003752, nlp-14, Neuropeptide-Like Protein, [Score=62.4, Expect=7e-10]} {Smed: dd_Smed_v6_1070_0_1, dd_Smed_v6_1070_0_1, [Score=67.0, Expect=2e-10]} {RNA1509_21072, RNA1509_24182, RNA1509_3905, RNA1509_425, RNA1509_58128} {RNA1310_1632.1, RNA1509_21072, RNA1509_24182, RNA1509_3905, RNA1509_58128} {RNA1509_21072, RNA1509_24182, RNA1509_3905, RNA1509_58128, RNA815_54} |
| 17. | MligTC455_47934 | 2305 | 48.02 | Mlig455_024623, Mlig455_024638 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.217 Region-enriched R4: 1.189/0.00820 Regeneration-upregulated BL: 1.566 Regeneration-enriched BL: 1.566 |
PMM2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_024623 {REF} {Length: 1454} {TRANSSPLICED} {Pfam: Eukaryotic phosphomannomutase [PF03332.15, score=326.2]} {Human: ENSG00000140650, PMM2, phosphomannomutase 2, [RH, Score=291, Expect=1e-99]} {Mouse: ENSMUSG00000022711, Pmm2, phosphomannomutase 2, [RH, Score=287, Expect=3e-98]; ENSMUSG00000022474, Pmm1, phosphomannomutase 1, [RH, Score=279, Expect=2e-94]} {Dmel: FBgn0036300, Pmm2, Phosphomannomutase type 2, [RH, Score=272, Expect=4e-92]} {Celegans: WBGene00009925, F52B11.2, Probable phosphomannomutase, [RH, Score=286, Expect=7e-98]} {Smed: dd_Smed_v6_1964_0_1, dd_Smed_v6_1964_0_1, [RH, Score=278, Expect=8e-95]} {RNA1509_31783, RNA1509_8556} {RNA1310_24094, RNA1509_31783, RNA1509_8556} {RNA1509_31783, RNA1509_8556, RNA815_9799} Mlig455_024638 {REF} {Length: 1242} {TRANSSPLICED} {Pfam: Eukaryotic phosphomannomutase [PF03332.15, score=329.7]} {Human: ENSG00000140650, PMM2, phosphomannomutase 2, [RH, Score=292, Expect=7e-100]; ENSG00000100417, PMM1, phosphomannomutase 1, [RH, Score=278, Expect=6e-94]} {Mouse: ENSMUSG00000022711, Pmm2, phosphomannomutase 2, [RH, Score=289, Expect=9e-99]; ENSMUSG00000022474, Pmm1, phosphomannomutase 1, [RH, Score=280, Expect=5e-95]} {Dmel: FBgn0036300, Pmm2, Phosphomannomutase type 2, [RH, Score=273, Expect=1e-92]} {Celegans: WBGene00009925, F52B11.2, Probable phosphomannomutase, [RH, Score=288, Expect=2e-98]} {Smed: dd_Smed_v6_1964_0_1, dd_Smed_v6_1964_0_1, [RH, Score=281, Expect=6e-96]} {RNA1509_31783} {RNA1310_24094} {RNA815_9799} |
| 18. | MligTC455_04511 | 58 | 1.2 | Mlig455_015094 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 5.762/0.00002 |
C1GALT1 | 0.95 | - | 0.950 | - | - | - | - | Mlig455_015094 {REF} {Length: 1166} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=60.8, Expect=1e-11]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=61.6, Expect=4e-12]} {Dmel: FBgn0033271, CG8708, [Score=61.6, Expect=3e-12]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=73.9, Expect=1e-16]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=72.0, Expect=4e-16]} {RNA1509_52982} {RNA1310_33395, RNA1509_52982} {RNA1509_52982, RNA815_16255} |
| 19. | MligTC455_10432 | 17 | 0.36 | Mlig455_060281 | Neo: - Age: - Region-enriched R8: 6.274/0.00970 |
0.95 | - | 0.950 | - | - | - | - | Mlig455_060281 {REF} {Length: 991} {RNA1509_46589} {RNA1310_44856} {RNA815_64763} |
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