Data search
Results for MligTC455_20750
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20750 | 437 | 9.10 | Mlig455_061285 | Neo: - Age: - |
Mlig455_061285 {REF} {Length: 1578} {RNA1509_48067} {RNA1310_55618} {RNA815_45008} |
Cumulative graph for MligTC455_20750
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.581 | 3.618 | 0.67781 | 1.00000 | |
| RegionR2 | -0.562 | 3.618 | 0.38420 | 0.77918 | |
| RegionR3 | -0.136 | 3.618 | 0.77780 | 1.00000 | |
| RegionR4 | 1.215 | 3.618 | 0.04807 | 0.18775 | |
| RegionR5 | 0.35 | 3.618 | 0.41571 | 0.77538 | |
| RegionR6 | -0.098 | 3.618 | 0.84086 | 1.00000 | |
| RegionR7 | -0.525 | 3.618 | 0.41546 | 1.00000 | |
| RegionR8 | -0.826 | 3.618 | 0.28872 | 0.91610 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.525 | 3.618 | 0.28352 | 0.98316 | |
| RegenerationR2 | 1.178 | 3.618 | 0.01996 | 0.23194 | |
| RegenerationR3 | 0.1 | 3.618 | 0.86689 | 1.00000 | |
| RegenerationR4 | -0.08 | 3.618 | 0.89441 | 1.00000 | |
| RegenerationR5 | 0.294 | 3.618 | 0.56727 | 0.89512 | |
| RegenerationR6 | 0.931 | 3.618 | 0.10292 | 0.39735 | |
| RegenerationBL | 1.015 | 3.618 | 0.15573 | 0.47222 | |
| RegenerationTP | 0.217 | 3.618 | 0.78609 | 1.00000 |
Genes with expression patterns similar to MligTC455_20750
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20750 | 437 | 9.1 | Mlig455_061285 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_061285 {REF} {Length: 1578} {RNA1509_48067} {RNA1310_55618} {RNA815_45008} | |
| 2. | MligTC455_20751 | 432 | 9.01 | Mlig455_061318 | Neo: Irradiation Age: - |
ZC3H3 | 5.793 | 0.970 | 0.996 | 0.998 | 0.997 | 0.936 | 0.896 | Mlig455_061318 {REF} {Length: 5472} {TRANSSPLICED} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [Score=50.8, Expect=1e-05]} {RNA1509_15291, RNA1509_28005} {RNA1310_3409.1, RNA1509_15291} {RNA1509_15291, RNA815_8747} |
| 3. | MligTC455_47998 | 567 | 11.82 | Mlig455_000429, Mlig455_000530 | Neo: - Age: - Region-enriched R4: 1.667/0.01537 |
SCARB2 | 1.762 | 0.810 | - | - | - | 0.952 | - | Mlig455_000429 {REF} {Length: 2558} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=373.9]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=250, Expect=2e-76]; ENSG00000135218, CD36, CD36 molecule, [Score=238, Expect=2e-71]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=253, Expect=3e-77]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=196, Expect=6e-56]} {Celegans: WBGene00013578, scav-2, SCAVenger receptor (CD36 family) related, [RH, Score=167, Expect=6e-45]} {Smed: dd_Smed_v6_2304_0_1, dd_Smed_v6_2304_0_1, [Score=295, Expect=8e-94]} {RNA1509_17179} {RNA1310_15296} {RNA815_6402.1} Mlig455_000530 {REF} {Length: 3098} {Pfam: CD36 family [PF01130.23, score=373.9]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=250, Expect=2e-76]; ENSG00000135218, CD36, CD36 molecule, [Score=238, Expect=2e-71]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=253, Expect=3e-77]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=196, Expect=6e-56]} {Celegans: WBGene00013578, scav-2, SCAVenger receptor (CD36 family) related, [RH, Score=167, Expect=6e-45]} {Smed: dd_Smed_v6_2304_0_1, dd_Smed_v6_2304_0_1, [Score=295, Expect=8e-94]} {RNA1509_17179} {RNA1310_15296, RNA1509_17179} {RNA1509_17179, RNA815_6402.1} |
| 4. | MligTC455_37126 | 1036 | 21.59 | Mlig455_059720 | Neo: - Age: - |
POLR1A | 1.708 | 0.758 | - | - | 0.950 | - | - | Mlig455_059720 {REF} {Length: 1092} {Pfam: RNA polymerase Rpb1, domain 5 [PF04998.19, score=52.0]} {Human: ENSG00000068654, POLR1A, RNA polymerase I subunit A, [Score=120, Expect=2e-30]} {Mouse: ENSMUSG00000049553, Polr1a, polymerase (RNA) I polypeptide A, [Score=120, Expect=1e-30]} {Dmel: FBgn0019938, RpI1, RNA polymerase I subunit, [Score=117, Expect=1e-29]} {Celegans: WBGene00012999, rpoa-1, RNA POlymerase I (A) subunit, [Score=107, Expect=3e-26]} {Smed: dd_Smed_v6_9059_1_1, dd_Smed_v6_9059_1_1, [RH, Score=101, Expect=1e-27]} {RNA1509_15567} {RNA1310_628.3} {RNA815_11233} |
| 5. | MligTC455_19659 | 324 | 6.74 | Mlig455_051975 | Neo: - Age: Down-Up-Up |
ENDOG | 1.684 | 0.718 | - | 0.966 | - | - | - | Mlig455_051975 {REF} {Length: 5888} {TRANSSPLICED} {Pfam: DNA/RNA non-specific endonuclease [PF01223.25, score=176.8]} {Human: ENSG00000167136, ENDOG, endonuclease G, [RH, Score=204, Expect=8e-64]} {Mouse: ENSMUSG00000015337, Endog, endonuclease G, [RH, Score=207, Expect=3e-65]} {Dmel: FBgn0033690, EndoG, Endonuclease G, [RH, Score=247, Expect=1e-80]} {Celegans: WBGene00000787, cps-6, Endonuclease G, mitochondrial, [RH, Score=208, Expect=2e-65]} {Smed: dd_Smed_v6_14758_0_1, dd_Smed_v6_14758_0_1, [RH, Score=222, Expect=2e-71]} {RNA1509_48918} {RNA1310_33978, RNA1509_48918} {RNA1509_48918, RNA815_16080} |
| 6. | MligTC455_34343 | 416 | 8.67 | Mlig455_014651 | Neo: - Age: - |
0.976 | - | - | - | 0.976 | - | - | Mlig455_014651 {REF} {Length: 1002} {NoTransDecoderORF} {RNA1509_44079} {RNA1310_51846} {RNA815_19953} | |
| 7. | MligTC455_35057 | 168 | 3.5 | Mlig455_034251 | Neo: - |
FER | 0.963 | - | - | - | - | 0.963 | - | Mlig455_034251 {REF} {Length: 2802} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=213.3]; Protein kinase domain [PF00069.27, score=79.6]} {Human: ENSG00000151422, FER, FER tyrosine kinase, [Score=197, Expect=9e-59]; ENSG00000182511, FES, FES proto-oncogene, tyrosine kinase, [Score=196, Expect=1e-58]} {Mouse: ENSMUSG00000053158, Fes, feline sarcoma oncogene, [Score=196, Expect=2e-58]; ENSMUSG00000000127, Fer, fer (fms/fps related) protein kinase, [Score=195, Expect=3e-58]} {Dmel: FBgn0000723, FER, FER tyrosine kinase, [Score=202, Expect=9e-61]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=161, Expect=6e-50]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [Score=159, Expect=6e-46]} {RNA1509_41151} {RNA1310_3040.2} {RNA815_19756} |
| 8. | MligTC455_43172 | 1072 | 22.33 | Mlig455_019005, Mlig455_055701 | Neo: - Age: logFC(26M/2M)=-0.246 |
0.963 | - | - | 0.963 | - | - | - | Mlig455_019005 {REF} {Length: 2171} {TRANSSPLICED} {Celegans: WBGene00016619, C43H6.6, [RH, Score=61.2, Expect=6e-10]} {RNA1509_18749} {RNA1310_18219, RNA1509_18749} {RNA1509_18749, RNA815_20013} Mlig455_055701 {REF} {Length: 2038} {TRANSSPLICED} {Celegans: WBGene00016619, C43H6.6, [RH, Score=60.5, Expect=1e-09]} {RNA1509_18749} {RNA1310_18219} {RNA815_20013} |
|
| 9. | MligTC455_48758 | 163 | 3.39 | Mlig455_010315 | Neo: Int S/G2/M |
ARF6 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_010315 {REF} {Length: 1923} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=247.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.7]; Ras family [PF00071.24, score=50.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=45.8]; G-protein alpha subunit [PF00503.22, score=38.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=33.9]; 50S ribosome-binding GTPase [PF01926.25, score=24.2]; 6-phosphofructo-2-kinase [PF01591.20, score=18.1]} {Human: ENSG00000165527, ARF6, ADP ribosylation factor 6, [RH, Score=301, Expect=7e-106]} {Mouse: ENSMUSG00000044147, Arf6, ADP-ribosylation factor 6, [RH, Score=301, Expect=5e-106]} {Dmel: FBgn0013750, Arf51F, ADP ribosylation factor at 51F, [RH, Score=296, Expect=4e-104]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [RH, Score=292, Expect=1e-102]} {Smed: dd_Smed_v6_2125_0_1, dd_Smed_v6_2125_0_1, [RH, Score=279, Expect=1e-97]} {RNA1509_10836, RNA1509_35617} {RNA1310_23391, RNA1509_35617} {RNA1509_35617, RNA815_10077} |
| 10. | MligTC455_34344 | 775 | 16.15 | Mlig455_014687, Mlig455_014732 | Neo: Int S/G2/M Age: - |
VAV2 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_014687 {REF} {Length: 6462} {Pfam: RhoGEF domain [PF00621.22, score=103.0]; SH2 domain [PF00017.26, score=65.8]; Calponin homology (CH) domain [PF00307.33, score=37.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=29.5]; CAMSAP CH domain [PF11971.10, score=19.1]} {Human: ENSG00000160293, VAV2, vav guanine nucleotide exchange factor 2, [RH, Score=325, Expect=1e-95]} {Mouse: ENSMUSG00000009621, Vav2, vav 2 oncogene, [Score=315, Expect=6e-92]} {Dmel: FBgn0040068, Vav, Vav guanine nucleotide exchange factor, [RH, Score=216, Expect=2e-58]} {Celegans: WBGene00006887, vav-1, [RH, Score=209, Expect=3e-55]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [Score=276, Expect=4e-79]} {RNA1509_44079, RNA1509_9036} {RNA1310_4081.1, RNA1509_44079} {RNA1509_44079, RNA815_10272} Mlig455_014732 {REF} {Length: 4878} {Pfam: RhoGEF domain [PF00621.22, score=103.0]; SH2 domain [PF00017.26, score=64.5]; Calponin homology (CH) domain [PF00307.33, score=37.6]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=29.6]; CAMSAP CH domain [PF11971.10, score=19.2]} {Human: ENSG00000160293, VAV2, vav guanine nucleotide exchange factor 2, [Score=316, Expect=3e-92]} {Mouse: ENSMUSG00000009621, Vav2, vav 2 oncogene, [Score=307, Expect=3e-89]} {Dmel: FBgn0040068, Vav, Vav guanine nucleotide exchange factor, [Score=207, Expect=2e-55]} {Celegans: WBGene00006887, vav-1, [Score=205, Expect=4e-54]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [Score=238, Expect=5e-66]} {RNA1509_9036} {RNA1310_4081.1} {RNA815_9697} |
| 11. | MligTC455_26150 | 294 | 6.13 | Mlig455_009968, Mlig455_042983 | Neo: - Age: - |
HINT3 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_009968 {REF} {Length: 2988} {Pfam: Scavenger mRNA decapping enzyme C-term binding [PF11969.10, score=74.9]; Methyltransferase domain [PF13383.8, score=33.5]; HIT domain [PF01230.25, score=26.3]} {Human: ENSG00000111911, HINT3, histidine triad nucleotide binding protein 3, [Score=99.8, Expect=1e-23]} {Mouse: ENSMUSG00000019791, Hint3, histidine triad nucleotide binding protein 3, [Score=101, Expect=1e-24]} {Dmel: FBgn0054015, CG34015, [Score=79.0, Expect=3e-17]} {Celegans: WBGene00016150, hint-3, HIstidiNe Triad nucleotide-binding protein, [Score=65.9, Expect=2e-12]} {Smed: dd_Smed_v6_11146_0_1, dd_Smed_v6_11146_0_1, [Score=112, Expect=5e-29]} {RNA1509_27348, RNA1509_45349} {RNA1310_31851.1, RNA1509_27348} {RNA1509_27348, RNA815_16272.1} Mlig455_042983 {REF} {Length: 654} {Pfam: Domain of unknown function (DUF4081) [PF13312.8, score=35.0]; Ribosomal protein S31e [PF17067.7, score=21.9]} {RNA1509_37248} {RNA1310_104355} {RNA815_13586} |