Data search
Results for MligTC455_37126
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_37126 | 1036 | 21.59 | Mlig455_059720 | Neo: - Age: - |
POLR1A | Mlig455_059720 {REF} {Length: 1092} {Pfam: RNA polymerase Rpb1, domain 5 [PF04998.19, score=52.0]} {Human: ENSG00000068654, POLR1A, RNA polymerase I subunit A, [Score=120, Expect=2e-30]} {Mouse: ENSMUSG00000049553, Polr1a, polymerase (RNA) I polypeptide A, [Score=120, Expect=1e-30]} {Dmel: FBgn0019938, RpI1, RNA polymerase I subunit, [Score=117, Expect=1e-29]} {Celegans: WBGene00012999, rpoa-1, RNA POlymerase I (A) subunit, [Score=107, Expect=3e-26]} {Smed: dd_Smed_v6_9059_1_1, dd_Smed_v6_9059_1_1, [RH, Score=101, Expect=1e-27]} {RNA1509_15567} {RNA1310_628.3} {RNA815_11233} |
Cumulative graph for MligTC455_37126
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.169 | 4.748 | 0.87121 | 1.00000 | |
| RegionR2 | 0.454 | 4.748 | 0.30522 | 0.69588 | |
| RegionR3 | -0.182 | 4.748 | 0.62531 | 1.00000 | |
| RegionR4 | 0.292 | 4.748 | 0.46492 | 0.79272 | |
| RegionR5 | 0.708 | 4.748 | 0.02235 | 0.10510 | |
| RegionR6 | -0.095 | 4.748 | 0.80272 | 1.00000 | |
| RegionR7 | -0.342 | 4.748 | 0.51889 | 1.00000 | |
| RegionR8 | -0.666 | 4.748 | 0.36312 | 0.99787 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.354 | 4.748 | 0.80882 | 1.00000 | |
| RegenerationR2 | 0.424 | 4.748 | 0.23099 | 0.67840 | |
| RegenerationR3 | 0.902 | 4.748 | 0.02521 | 0.28588 | |
| RegenerationR4 | 0.531 | 4.748 | 0.17827 | 0.61796 | |
| RegenerationR5 | 0.656 | 4.748 | 0.06358 | 0.39917 | |
| RegenerationR6 | 1.315 | 4.748 | 0.00088 | 0.03203 | |
| RegenerationBL | 1.489 | 4.748 | 0.00124 | 0.02636 | |
| RegenerationTP | 0.913 | 4.748 | 0.10588 | 0.50380 |
Genes with expression patterns similar to MligTC455_37126
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_37126 | 1036 | 21.59 | Mlig455_059720 | Neo: - Age: - |
POLR1A | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059720 {REF} {Length: 1092} {Pfam: RNA polymerase Rpb1, domain 5 [PF04998.19, score=52.0]} {Human: ENSG00000068654, POLR1A, RNA polymerase I subunit A, [Score=120, Expect=2e-30]} {Mouse: ENSMUSG00000049553, Polr1a, polymerase (RNA) I polypeptide A, [Score=120, Expect=1e-30]} {Dmel: FBgn0019938, RpI1, RNA polymerase I subunit, [Score=117, Expect=1e-29]} {Celegans: WBGene00012999, rpoa-1, RNA POlymerase I (A) subunit, [Score=107, Expect=3e-26]} {Smed: dd_Smed_v6_9059_1_1, dd_Smed_v6_9059_1_1, [RH, Score=101, Expect=1e-27]} {RNA1509_15567} {RNA1310_628.3} {RNA815_11233} |
| 2. | MligTC455_37125 | 1015 | 21.14 | Mlig455_015954 | Neo: - Age: - |
POLR1A | 5.948 | 0.999 | 1.000 | 1.000 | 0.992 | 0.994 | 0.963 | Mlig455_015954 {REF} {Length: 6049} {TRANSSPLICED} {Pfam: RNA polymerase Rpb1, domain 5 [PF04998.19, score=273.7]; RNA polymerase Rpb1, domain 2 [PF00623.22, score=199.6]; RNA polymerase Rpb1, domain 3 [PF04983.20, score=98.7]; RNA polymerase Rpb1, domain 4 [PF05000.19, score=63.8]} {Human: ENSG00000068654, POLR1A, RNA polymerase I subunit A, [RH, Score=758, Expect=0.0]} {Mouse: ENSMUSG00000049553, Polr1a, polymerase (RNA) I polypeptide A, [RH, Score=884, Expect=0.0]} {Dmel: FBgn0030687, CG17209, [Score=376, Expect=1e-107]} {Celegans: WBGene00012999, rpoa-1, RNA POlymerase I (A) subunit, [RH, Score=870, Expect=0.0]} {Smed: dd_Smed_v6_9059_0_1, dd_Smed_v6_9059_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_15567, RNA1509_4810} {RNA1310_628.1, RNA1509_15567, RNA1509_4810} {RNA1509_15567, RNA1509_4810, RNA815_1004} |
| 3. | MligTC455_44892 | 642 | 13.37 | Mlig455_048764 | Neo: - Age: logFC(26M/2M)=0.308 |
SMARCC2 | 2.607 | 0.831 | 0.806 | - | 0.970 | - | - | Mlig455_048764 {REF} {Length: 4246} {Pfam: SWIRM-associated domain at the C-terminal [PF16498.7, score=52.9]; SWIRM-associated region 1 [PF16495.7, score=25.2]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [Score=108, Expect=6e-24]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [Score=110, Expect=2e-24]} {Dmel: FBgn0002783, mor, moira, [Score=89.0, Expect=6e-18]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [Score=94.4, Expect=7e-20]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [Score=90.1, Expect=2e-18]} {RNA1509_49479} {RNA1310_2189} {RNA815_8217} |
| 4. | MligTC455_20514 | 1263 | 26.31 | Mlig455_008860 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.491/0.00005 Regeneration-upregulated BL: 1.687 Regeneration-enriched BL: 1.687 |
RPA1 | 2.433 | - | - | 0.746 | 0.970 | 0.717 | - | Mlig455_008860 {REF} {Length: 2265} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=145.1]; Replication protein A OB domain [PF16900.7, score=113.7]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=63.4]; OB-fold nucleic acid binding domain [PF01336.27, score=53.1]; Cell division control protein 24, OB domain 3 [PF17244.4, score=31.4]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=456, Expect=2e-153]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=452, Expect=9e-152]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=391, Expect=1e-128]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [Score=204, Expect=2e-57]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=399, Expect=1e-132]} {RNA1509_4117} {RNA1310_8147} {RNA815_2777} |
| 5. | MligTC455_20751 | 432 | 9.01 | Mlig455_061318 | Neo: Irradiation Age: - |
ZC3H3 | 1.768 | 0.813 | - | - | 0.955 | - | - | Mlig455_061318 {REF} {Length: 5472} {TRANSSPLICED} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [Score=50.8, Expect=1e-05]} {RNA1509_15291, RNA1509_28005} {RNA1310_3409.1, RNA1509_15291} {RNA1509_15291, RNA815_8747} |
| 6. | MligTC455_24894 | 874 | 18.21 | Mlig455_034567 | Neo: Int S/G2/M Age: - |
GPN3 | 1.713 | - | 0.761 | - | - | 0.952 | - | Mlig455_034567 {REF} {Length: 1047} {TRANSSPLICED} {Pfam: Conserved hypothetical ATP binding protein [PF03029.19, score=261.2]; CobQ/CobB/MinD/ParA nucleotide binding domain [PF01656.25, score=19.6]; AAA domain [PF13238.8, score=19.5]} {Human: ENSG00000111231, GPN3, GPN-loop GTPase 3, [RH, Score=325, Expect=3e-111]} {Mouse: ENSMUSG00000029464, Gpn3, GPN-loop GTPase 3, [RH, Score=322, Expect=2e-110]} {Dmel: FBgn0037478, CG2656, [RH, Score=293, Expect=2e-99]} {Celegans: WBGene00013550, Y75B8A.14, [RH, Score=279, Expect=7e-94]} {Smed: dd_Smed_v6_5806_0_1, dd_Smed_v6_5806_0_1, [RH, Score=226, Expect=3e-73]} {RNA1509_27210} {RNA1310_34060.1} {RNA815_15785} |
| 7. | MligTC455_20750 | 437 | 9.1 | Mlig455_061285 | Neo: - Age: - |
1.708 | 0.758 | - | - | 0.950 | - | - | Mlig455_061285 {REF} {Length: 1578} {RNA1509_48067} {RNA1310_55618} {RNA815_45008} | |
| 8. | MligTC455_12809 | 506 | 10.55 | Mlig455_037639 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.705 Region-enriched R5: 1.347/0.01568 |
1.674 | 0.719 | - | - | 0.955 | - | - | Mlig455_037639 {REF} {Length: 2516} {TRANSSPLICED} {Pfam: HAP1 N-terminal conserved region [PF04849.15, score=20.9]} {RNA1509_14533} {RNA1310_10263.1} {RNA815_2693.1} | |
| 9. | MligTC455_47883 | 1329 | 27.69 | Mlig455_070176 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.392 Region-enriched R4: 1.373/0.00440 |
0.963 | - | - | - | 0.963 | - | - | Mlig455_070176 {REF} {Length: 941} {TRANSSPLICED} {RNA1509_12311, RNA1509_15274, RNA1509_58463} {RNA1310_5229.1, RNA1509_12311, RNA1509_15274, RNA1509_58463} {RNA1509_12311, RNA1509_15274, RNA1509_58463, RNA815_9722.1} | |
| 10. | MligTC455_23932 | 279 | 5.81 | Mlig455_012192 | Neo: - Age: Up-Up-Down |
XKR6 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_012192 {REF} {Length: 2839} {TRANSSPLICED} {Pfam: XK-related protein [PF09815.11, score=275.0]} {Human: ENSG00000171044, XKR6, XK related 6, [Score=183, Expect=3e-50]} {Mouse: ENSMUSG00000035067, Xkr6, X-linked Kx blood group related 6, [Score=175, Expect=2e-47]} {Dmel: FBgn0052579, CG32579, [Score=58.2, Expect=6e-09]} {Celegans: WBGene00000422, ced-8, Cell death abnormality protein 8, [RH, Score=83.6, Expect=5e-17]} {Smed: dd_Smed_v6_11903_0_2, dd_Smed_v6_11903_0_2, [Score=174, Expect=8e-49]} {RNA1509_13267} {RNA1310_18427.1} {RNA815_7595} |
| 11. | MligTC455_23933 | 268 | 5.58 | Mlig455_028818 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_028818 {REF} {Length: 1007} {NoTransDecoderORF} {RNA1509_13267} {RNA1310_68401} {RNA815_33809.2} | |
| 12. | MligTC455_41061 | 2302 | 47.97 | Mlig455_000974 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.749/0.00000 |
USP14 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_000974 {REF} {Length: 2623} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=159.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=41.6]; Ubiquitin family [PF00240.25, score=22.4]} {Human: ENSG00000101557, USP14, ubiquitin specific peptidase 14, [RH, Score=463, Expect=6e-159]} {Mouse: ENSMUSG00000047879, Usp14, ubiquitin specific peptidase 14, [RH, Score=473, Expect=5e-163]} {Dmel: FBgn0032216, Usp14, Ubiquitin specific protease 14, [RH, Score=469, Expect=5e-162]} {Celegans: WBGene00006856, usp-14, Ubiquitin carboxyl-terminal hydrolase 14, [RH, Score=309, Expect=1e-99]} {Smed: dd_Smed_v6_2505_0_1, dd_Smed_v6_2505_0_1, [RH, Score=471, Expect=2e-162]} {RNA1509_11152, RNA1509_11743, RNA1509_27151, RNA1509_29673, RNA1509_32030, RNA1509_35676, RNA1509_45830, RNA1509_54705} {RNA1310_10983, RNA1509_11152, RNA1509_11743, RNA1509_27151, RNA1509_29673, RNA1509_32030, RNA1509_35676, RNA1509_45830, RNA1509_54705} {RNA1509_11152, RNA1509_11743, RNA1509_27151, RNA1509_29673, RNA1509_32030, RNA1509_35676, RNA1509_45830, RNA1509_54705, RNA815_2344.1} |
| 13. | MligTC455_18701 | 462 | 9.62 | Mlig455_002151 | Neo: - Age: - |
RPS7 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_002151 {REF} {Length: 4747} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=189.9]; Major intrinsic protein [PF00230.22, score=18.7]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [Score=198, Expect=2e-60]} {Mouse: ENSMUSG00000061477, Rps7, ribosomal protein S7, [Score=198, Expect=2e-60]; ENSMUSG00000044424, Gm9493, predicted gene 9493, [Score=198, Expect=2e-60]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [Score=177, Expect=1e-52]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [Score=165, Expect=3e-48]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [Score=156, Expect=6e-45]} {RNA1509_51916, RNA1509_53833} {RNA1310_2260.1, RNA1509_53833} {RNA1509_53833, RNA815_12689} |
| 14. | MligTC455_26503 | 114 | 2.37 | Mlig455_055217 | Neo: Int S/G2/M Age: - Region-enriched R4: 7.372/0.00058 |
CPSF6 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_055217 {REF} {Length: 5089} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=26.5]} {Human: ENSG00000111605, CPSF6, cleavage and polyadenylation specific factor 6, [RH, Score=139, Expect=1e-34]} {Mouse: ENSMUSG00000055531, Cpsf6, cleavage and polyadenylation specific factor 6, [RH, Score=139, Expect=2e-34]} {Dmel: FBgn0035872, CG7185, [RH, Score=133, Expect=3e-32]} {Celegans: WBGene00008362, cfim-2, Cleavage Factor IM (CFIm) homolog, [RH, Score=96.7, Expect=7e-21]} {Smed: dd_Smed_v6_4839_0_1, dd_Smed_v6_4839_0_1, [RH, Score=152, Expect=2e-39]} {RNA1509_8357} {RNA1310_5998} {RNA815_15488} |
| 15. | MligTC455_31671 | 799 | 16.64 | Mlig455_007386 | Neo: Irradiation Age: - |
RAD21 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_007386 {REF} {Length: 3384} {TRANSSPLICED} {Pfam: N terminus of Rad21 / Rec8 like protein [PF04825.15, score=137.7]} {Human: ENSG00000164754, RAD21, RAD21 cohesin complex component, [RH, Score=274, Expect=5e-85]} {Mouse: ENSMUSG00000022314, Rad21, RAD21 cohesin complex component, [RH, Score=275, Expect=4e-85]} {Dmel: FBgn0260987, vtd, verthandi, [RH, Score=276, Expect=4e-85]} {Celegans: WBGene00000591, coh-1, COHesin family, [RH, Score=201, Expect=6e-58]} {Smed: dd_Smed_v6_4032_0_1, dd_Smed_v6_4032_0_1, [RH, Score=288, Expect=3e-89]} {RNA1509_59154, RNA1509_59509} {RNA1310_10984.1, RNA1509_59154, RNA1509_59509} {RNA1509_59154, RNA1509_59509, RNA815_23741} |
| 16. | MligTC455_41634 | 1305 | 27.19 | Mlig455_006564, Mlig455_006677, Mlig455_006727 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_006564 {REF} {Length: 1558} {TRANSSPLICED} {RNA1509_42825} {RNA1310_31529} {RNA815_14594} Mlig455_006677 {REF} {Length: 1232} {TRANSSPLICED} {RNA1509_42825} {RNA1310_31529, RNA1509_42825} {RNA1509_42825, RNA815_14594} Mlig455_006727 {REF} {Length: 860} {TRANSSPLICED} {RNA1509_42825} {RNA1310_31529} {RNA815_14594} |
|
| 17. | MligTC455_30496 | 506 | 10.54 | Mlig455_026882 | Neo: - Age: logFC(26M/2M)=0.358 Region-enriched R4: 2.152/0.01690 |
MYO6 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_026882 {REF} {Length: 5927} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=758.2]; Myosin VI cargo binding domain [PF16521.7, score=129.6]; Myosin N-terminal SH3-like domain [PF02736.21, score=30.1]} {Human: ENSG00000196586, MYO6, myosin VI, [Score=910, Expect=0.0]} {Mouse: ENSMUSG00000033577, Myo6, myosin VI, [Score=896, Expect=0.0]} {Dmel: FBgn0011225, jar, jaguar, [Score=881, Expect=0.0]} {Celegans: WBGene00004969, spe-15, [Score=775, Expect=0.0]} {Smed: dd_Smed_v6_4503_0_1, dd_Smed_v6_4503_0_1, [Score=844, Expect=0.0]} {RNA1509_1417} {RNA1310_883} {RNA815_546} |
| 18. | MligTC455_44178 | 689 | 14.34 | Mlig455_011679 | Neo: - Age: - Region-enriched R5: 1.479/0.00020 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_011679 {REF} {Length: 1157} {NoTransDecoderORF} {RNA1509_26459} {RNA1310_18996.2} {RNA815_12555.1} |
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