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Results for MligTC455_20789

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20789 403 8.41 Mlig455_068118

Neo: Int S/G2/M

Age: -

 UBE2J1 Mlig455_068118 {REF} {Length: 2229} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=65.5]} {Human: ENSG00000198833, UBE2J1, ubiquitin conjugating enzyme E2 J1, [RH, Score=260, Expect=5e-85]} {Mouse: ENSMUSG00000028277, Ube2j1, ubiquitin-conjugating enzyme E2J 1, [RH, Score=263, Expect=2e-86]} {Dmel: FBgn0038515, CG5823, [Score=125, Expect=8e-34]} {Celegans: WBGene00006703, ubc-6, UBiquitin Conjugating enzyme, [RH, Score=263, Expect=1e-86]} {Smed: dd_Smed_v6_2788_0_1, dd_Smed_v6_2788_0_1, [RH, Score=303, Expect=3e-101]} {RNA1509_11687} {RNA1310_24163} {RNA815_16666}

Cumulative graph for MligTC455_20789

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.046 3.642 0.14419 0.75617
RegionR2 1.179 3.642 0.02815 0.18908
RegionR3 0.724 3.642 0.07013 0.46789
RegionR4 0.583 3.642 0.22758 0.52010
RegionR5 0.377 3.642 0.31282 0.65182
RegionR6 0.749 3.642 0.07882 0.51938
RegionR7 -0.685 3.642 0.27971 0.91231
RegionR8 -0.881 3.642 0.26595 0.88978

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.003 3.642 0.50561 1.00000
RegenerationR2 0.142 3.642 0.72124 0.96301
RegenerationR3 0.543 3.642 0.21849 0.65511
RegenerationR4 -0.247 3.642 0.61008 0.91734
RegenerationR5 0.598 3.642 0.13672 0.54715
RegenerationR6 -0.355 3.642 0.48250 0.79325
RegenerationBL -1.457 3.642 0.16685 0.48952
RegenerationTP 2.001 3.642 0.00193 0.07075


Genes with expression patterns similar to MligTC455_20789

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20789 403 8.41 Mlig455_068118

Neo: Int S/G2/M

Age: -

 UBE2J1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_068118 {REF} {Length: 2229} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=65.5]} {Human: ENSG00000198833, UBE2J1, ubiquitin conjugating enzyme E2 J1, [RH, Score=260, Expect=5e-85]} {Mouse: ENSMUSG00000028277, Ube2j1, ubiquitin-conjugating enzyme E2J 1, [RH, Score=263, Expect=2e-86]} {Dmel: FBgn0038515, CG5823, [Score=125, Expect=8e-34]} {Celegans: WBGene00006703, ubc-6, UBiquitin Conjugating enzyme, [RH, Score=263, Expect=1e-86]} {Smed: dd_Smed_v6_2788_0_1, dd_Smed_v6_2788_0_1, [RH, Score=303, Expect=3e-101]} {RNA1509_11687} {RNA1310_24163} {RNA815_16666}
2. MligTC455_20788 562 11.71 Mlig455_023481

Neo: -

Age: logFC(26M/2M)=0.284

 UBE2J1 4.215 0.843 0.977 - 0.897 0.772 0.726 Mlig455_023481 {REF} {Length: 3141} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=65.4]} {Human: ENSG00000198833, UBE2J1, ubiquitin conjugating enzyme E2 J1, [RH, Score=258, Expect=3e-84]} {Mouse: ENSMUSG00000028277, Ube2j1, ubiquitin-conjugating enzyme E2J 1, [RH, Score=261, Expect=1e-85]} {Dmel: FBgn0038515, CG5823, [Score=126, Expect=8e-34]} {Celegans: WBGene00006703, ubc-6, UBiquitin Conjugating enzyme, [RH, Score=263, Expect=1e-86]} {Smed: dd_Smed_v6_2788_0_1, dd_Smed_v6_2788_0_1, [RH, Score=304, Expect=1e-101]} {RNA1509_11687} {RNA1310_24163, RNA1509_11687} {RNA1509_11687, RNA815_16666}
3. MligTC455_29236 1895 39.48 Mlig455_061724

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.397

Region-enriched R2: 1.598/0.01756

 ABCA1 0.972 - - - 0.972 - - Mlig455_061724 {REF} {Length: 9162} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=184.0]; ABC-2 family transporter protein [PF12698.9, score=183.1]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=68.8]; AAA domain [PF13476.8, score=23.5]} {Human: ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [RH, Score=1259, Expect=0.0]} {Mouse: ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [RH, Score=1268, Expect=0.0]} {Dmel: FBgn0031170, CG1718, [Score=456, Expect=4e-131]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=395, Expect=3e-111]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [RH, Score=1178, Expect=0.0]} {RNA1509_742} {RNA1310_526.1} {RNA815_69.1}
4. MligTC455_29237 1849 38.51 Mlig455_061754

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.515

Region-enriched R2: 1.588/0.01616

 ABCA1 0.972 - - - 0.972 - - Mlig455_061754 {REF} {Length: 8294} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=184.8]; ABC-2 family transporter protein [PF12698.9, score=179.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=68.8]; AAA domain [PF13476.8, score=23.8]} {Human: ENSG00000165029, ABCA1, ATP binding cassette subfamily A member 1, [RH, Score=1255, Expect=0.0]} {Mouse: ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [RH, Score=1262, Expect=0.0]} {Dmel: FBgn0031170, CG1718, [Score=455, Expect=1e-130]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=391, Expect=5e-110]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [RH, Score=1169, Expect=0.0]} {RNA1509_742} {RNA1310_526.1} {RNA815_69.1}
5. MligTC455_51413 414 8.63 Mlig455_025235

Neo: -

Age: logFC(26M/2M)=0.368

 CTH 0.958 - - - - 0.958 - Mlig455_025235 {REF} {Length: 1605} {TRANSSPLICED} {Pfam: Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=442.5]; Methionine gamma-lyase [PF06838.13, score=17.2]} {Human: ENSG00000116761, CTH, cystathionine gamma-lyase, [RH, Score=411, Expect=1e-140]} {Mouse: ENSMUSG00000028179, Cth, cystathionase (cystathionine gamma-lyase), [RH, Score=423, Expect=1e-145]} {Dmel: FBgn0000566, Eip55E, [RH, Score=427, Expect=3e-147]} {Celegans: WBGene00022856, cth-2, Putative cystathionine gamma-lyase 2, [RH, Score=419, Expect=3e-144]} {Smed: dd_Smed_v6_2859_0_1, dd_Smed_v6_2859_0_1, [RH, Score=402, Expect=2e-137]} {RNA1509_28820} {RNA1310_16713} {RNA815_6828.1}
6. MligTC455_29764 2289 47.69 Mlig455_034982, Mlig455_053702

Neo: -

Age: -

 CHMP3 0.955 - - - 0.955 - -

Mlig455_034982 {REF} {Length: 4316} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=121.0]} {Human: ENSG00000115561, CHMP3, charged multivesicular body protein 3, [RH, Score=181, Expect=9e-57]} {Mouse: ENSMUSG00000053119, Chmp3, charged multivesicular body protein 3, [RH, Score=190, Expect=1e-60]} {Dmel: FBgn0037231, Vps24, Vacuolar protein sorting 24, [RH, Score=187, Expect=1e-59]} {Celegans: WBGene00020866, vps-24, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=191, Expect=1e-61]} {Smed: dd_Smed_v6_1667_0_1, dd_Smed_v6_1667_0_1, [RH, Score=236, Expect=4e-79]} {RNA1509_3233} {RNA1310_37073} {RNA815_15586}

Mlig455_053702 {REF} {Length: 2731} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=121.0]} {Human: ENSG00000115561, CHMP3, charged multivesicular body protein 3, [RH, Score=181, Expect=9e-57]} {Mouse: ENSMUSG00000053119, Chmp3, charged multivesicular body protein 3, [RH, Score=190, Expect=1e-60]} {Dmel: FBgn0037231, Vps24, Vacuolar protein sorting 24, [RH, Score=187, Expect=1e-59]} {Celegans: WBGene00020866, vps-24, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=191, Expect=1e-61]} {Smed: dd_Smed_v6_1667_0_1, dd_Smed_v6_1667_0_1, [RH, Score=236, Expect=4e-79]} {RNA1509_21142, RNA1509_3233} {RNA1310_37073, RNA1509_21142, RNA1509_3233} {RNA1509_21142, RNA1509_3233, RNA815_15586}

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