TomoSeq data search

Data search

Results for MligTC455_20831

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_20831	27	0.57	Mlig455_054079	Neo: - Age: -	ASIC5	Mlig455_054079 {REF} {Length: 2500} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=136.4]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=58.2, Expect=2e-08]; ENSG00000262505, AC093830.1, acid sensing ion channel subunit family member 5, [Score=57.4, Expect=3e-08]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=57.0, Expect=3e-08]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=54.7, Expect=2e-07]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=60.1, Expect=2e-09]} {Smed: dd_Smed_v6_13943_0_1, dd_Smed_v6_13943_0_1, [Score=65.1, Expect=4e-11]} {RNA1509_35422} {RNA1310_9082.2} {RNA815_48221}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_20831

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.611	0.864	0.99958	1.00000
RegionR2	1.402	0.864	0.39907	0.79349
RegionR3	-0.303	0.864	0.99970	1.00000
RegionR4	2.855	0.864	0.06374	0.22720
RegionR5	0.961	0.864	0.62852	0.98160
RegionR6	-0.042	0.864	0.77586	1.00000
RegionR7	-1.195	0.864	0.99971	1.00000
RegionR8	-1.067	0.864	0.99969	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.12	0.864	1.00000	1.00000
RegenerationR2	-1.196	0.864	0.30233	0.74397
RegenerationR3	1.731	0.864	0.22004	0.65659
RegenerationR4	-2.872	0.864	0.08161	0.45183
RegenerationR5	2.676	0.864	0.07280	0.42325
RegenerationR6	2.565	0.864	0.18095	0.51598
RegenerationBL	2.419	0.864	0.29328	0.65558
RegenerationTP	-0.651	0.864	0.99995	1.00000

Genes with expression patterns similar to MligTC455_20831

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20831	27	0.57	Mlig455_054079	Neo: - Age: -	ASIC5	2	-	-	-	-	1.000	1.000	Mlig455_054079 {REF} {Length: 2500} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=136.4]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=58.2, Expect=2e-08]; ENSG00000262505, AC093830.1, acid sensing ion channel subunit family member 5, [Score=57.4, Expect=3e-08]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=57.0, Expect=3e-08]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=54.7, Expect=2e-07]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=60.1, Expect=2e-09]} {Smed: dd_Smed_v6_13943_0_1, dd_Smed_v6_13943_0_1, [Score=65.1, Expect=4e-11]} {RNA1509_35422} {RNA1310_9082.2} {RNA815_48221}
2.	MligTC455_29172	136	2.84	Mlig455_018254, Mlig455_018295	Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 2.277/0.00377		0.977	-	-	-	-	0.977	-	Mlig455_018254 {REF} {Length: 1104} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=23.4]} {RNA1509_57500} {RNA1310_28903} {RNA815_17993} Mlig455_018295 {REF} {Length: 1827} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=23.7]} {RNA1509_57500} {RNA1310_32124} {RNA815_17993}
3.	MligTC455_32076	319	6.65	Mlig455_058401	Neo: - Age: -		0.977	-	-	-	-	-	0.977	Mlig455_058401 {REF} {Length: 1003} {Pfam: Homeodomain-like domain [PF13384.8, score=33.5]; Helix-turn-helix domain [PF13936.8, score=33.4]; Helix-turn-helix domain of resolvase [PF02796.17, score=25.9]; Helix-turn-helix domain [PF13518.8, score=23.6]; Winged helix-turn helix [PF13551.8, score=22.4]; Tc3 transposase [PF11427.10, score=21.0]; 'Paired box' domain [PF00292.20, score=19.9]} {RNA1509_49032} {RNA1310_37860, RNA1509_49032} {RNA1509_49032, RNA815_36697}
4.	MligTC455_52037	158	3.3	Mlig455_004185	Neo: - Age: -	PIAS2	0.977	-	-	-	-	0.977	-	Mlig455_004185 {REF} {Length: 4387} {TRANSSPLICED} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=65.3]; PINIT domain [PF14324.8, score=42.7]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=21.9]} {Human: ENSG00000078043, PIAS2, protein inhibitor of activated STAT 2, [Score=93.2, Expect=4e-19]} {Mouse: ENSMUSG00000025423, Pias2, protein inhibitor of activated STAT 2, [Score=93.6, Expect=2e-19]} {Dmel: FBgn0003612, Su(var)2-10, Suppressor of variegation 2-10, [Score=105, Expect=3e-23]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=87.4, Expect=1e-17]} {Smed: dd_Smed_v6_10185_0_1, dd_Smed_v6_10185_0_1, [Score=99.8, Expect=2e-21]} {RNA1509_24763, RNA1509_34035, RNA1509_42955} {RNA1310_5130, RNA1509_24763, RNA1509_34035} {RNA1509_24763, RNA1509_34035, RNA815_10497}
5.	MligTC455_15722	22	0.45	Mlig455_008745	Neo: - Age: -		0.976	-	-	-	-	-	0.976	Mlig455_008745 {REF} {Length: 2568} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=33.2]} {Smed: dd_Smed_v6_31564_0_1, dd_Smed_v6_31564_0_1, [Score=75.1, Expect=4e-15]} {RNA1310_22173} {RNA815_13769}
6.	MligTC455_13077	69	1.44	Mlig455_008899	Neo: - Age: -		0.974	-	-	-	-	-	0.974	Mlig455_008899 {REF} {Length: 1453} {RNA1509_51032} {RNA1310_26040.1} {RNA815_18520.1}
7.	MligTC455_08373	45	0.93	Mlig455_029269	Neo: - Age: - Regeneration-enriched BL: 8.758 Regeneration-enriched R3: 7.516 Regeneration-enriched R4: 7.199 Regeneration-enriched R5: 6.286		0.972	-	-	-	-	-	0.972	Mlig455_029269 {REF} {Length: 739} {NoTransDecoderORF} {RNA1310_82709}
8.	MligTC455_14185	59	1.23	Mlig455_049747	Neo: - Age: Down-Up-Down		0.969	-	-	-	-	-	0.969	Mlig455_049747 {REF} {Length: 1185} {RNA1310_45179} {RNA815_26547}
9.	MligTC455_19917	83	1.72	Mlig455_057932, Mlig455_057967	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_057932 {REF} {Length: 2189} {RNA1310_65401} {RNA815_48417} Mlig455_057967 {REF} {Length: 1876} {RNA1310_65401} {RNA815_48417}
10.	MligTC455_12645	62	1.3	Mlig455_021679	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_021679 {REF} {Length: 829} {NoTransDecoderORF} {RNA1509_32554} {RNA1310_11719}
11.	MligTC455_11899	25	0.52	Mlig455_049912	Neo: - Age: -		0.96	-	-	-	-	-	0.960	Mlig455_049912 {REF} {Length: 1251} {NoTransDecoderORF} {RNA1509_59327} {RNA1310_138888} {RNA815_6259}
12.	MligTC455_14958	12	0.26	Mlig455_069448	Neo: - Age: -		0.96	-	-	-	-	-	0.960	Mlig455_069448 {REF} {Length: 899} {Smed: dd_Smed_v6_9265_0_1, dd_Smed_v6_9265_0_1, [Score=97.4, Expect=9e-24]} {RNA1310_70933}
13.	MligTC455_35275	40	0.84	Mlig455_039117	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_039117 {REF} {Length: 2535} {RNA1310_18660} {RNA815_15449}
14.	MligTC455_11171	38	0.79	Mlig455_032767	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_032767 {REF} {Length: 428} {TRANSSPLICED}
15.	MligTC455_32033	79	1.65	Mlig455_050881	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.558	MAPK14	0.957	-	-	-	-	-	0.957	Mlig455_050881 {REF} {Length: 2379} {Pfam: Protein kinase domain [PF00069.27, score=60.5]} {Human: ENSG00000112062, MAPK14, mitogen-activated protein kinase 14, [Score=92.4, Expect=1e-21]; ENSG00000050748, MAPK9, mitogen-activated protein kinase 9, [Score=91.3, Expect=3e-21]; ENSG00000156711, MAPK13, mitogen-activated protein kinase 13, [Score=88.2, Expect=4e-20]} {Mouse: ENSMUSG00000053436, Mapk14, mitogen-activated protein kinase 14, [Score=92.0, Expect=1e-21]; ENSMUSG00000020366, Mapk9, mitogen-activated protein kinase 9, [Score=91.3, Expect=2e-21]} {Dmel: FBgn0024846, p38b, p38b MAP kinase, [Score=90.5, Expect=3e-21]} {Celegans: WBGene00004055, pmk-1, Mitogen-activated protein kinase pmk-1, [Score=86.3, Expect=6e-20]} {Smed: dd_Smed_v6_6042_0_1, dd_Smed_v6_6042_0_1, [Score=87.8, Expect=1e-20]} {RNA1509_37050} {RNA1310_4000} {RNA815_17615}
16.	MligTC455_43673	77	1.61	Mlig455_022953	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_022953 {REF} {Length: 195} {NoTransDecoderORF} {RNA1310_64101} {RNA815_38499}
17.	MligTC455_14778	64	1.34	Mlig455_050609	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_050609 {REF} {Length: 1397} {NoTransDecoderORF} {RNA1509_18097} {RNA1310_120182} {RNA815_14810.1}
18.	MligTC455_10974	149	3.11	Mlig455_067448	Neo: Germline Age: -	REC8	0.953	-	-	-	-	-	0.953	Mlig455_067448 {REF} {Length: 2847} {TRANSSPLICED} {Pfam: N terminus of Rad21 / Rec8 like protein [PF04825.15, score=47.4]; Conserved region of Rad21 / Rec8 like protein [PF04824.18, score=40.1]} {Human: ENSG00000285007, REC8, REC8 meiotic recombination protein, [RH, Score=53.5, Expect=1e-06]; ENSG00000100918, REC8, REC8 meiotic recombination protein, [RH, Score=53.5, Expect=1e-06]} {Mouse: ENSMUSG00000002324, Rec8, REC8 meiotic recombination protein, [RH, Score=52.0, Expect=2e-06]} {Smed: dd_Smed_v6_15392_0_10, dd_Smed_v6_15392_0_10, [RH, Score=65.1, Expect=9e-13]} {RNA1509_34057} {RNA1310_5775, RNA1509_34057} {RNA1509_34057, RNA815_8912}
19.	MligTC455_12222	52	1.07	Mlig455_026926	Neo: Int S/G2/M Age: - Region-enriched R5: 3.013/0.04324		0.953	-	-	-	-	-	0.953	Mlig455_026926 {REF} {Length: 1089} {RNA1509_46037} {RNA1310_76532} {RNA815_40034}
20.	MligTC455_11282	124	2.58	Mlig455_017457, Mlig455_030936	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.648	FDXACB1	0.951	-	-	-	-	-	0.951	Mlig455_017457 {REF} {Length: 3560} {Pfam: Domain of unknown function (DUF2431) [PF10354.11, score=97.3]; Ferredoxin-fold anticodon binding domain [PF03147.16, score=28.8]} {Human: ENSG00000255561, FDXACB1, ferredoxin-fold anticodon binding domain containing 1, [RH, Score=97.4, Expect=1e-20]} {Mouse: ENSMUSG00000037845, Fdxacb1, ferredoxin-fold anticodon binding domain containing 1, [RH, Score=104, Expect=4e-23]} {Celegans: WBGene00012768, eef-1B.2, Probable elongation factor 1-beta/1-delta 2, [RH, Score=54.7, Expect=1e-07]} {Smed: dd_Smed_v6_12236_0_1, dd_Smed_v6_12236_0_1, [RH, Score=98.2, Expect=2e-21]} {RNA1509_12220} {RNA1310_10541} {RNA815_15665} Mlig455_030936 {REF} {Length: 2975} {Pfam: Domain of unknown function (DUF2431) [PF10354.11, score=97.3]; Ferredoxin-fold anticodon binding domain [PF03147.16, score=29.2]} {Human: ENSG00000255561, FDXACB1, ferredoxin-fold anticodon binding domain containing 1, [RH, Score=97.4, Expect=2e-20]} {Mouse: ENSMUSG00000037845, Fdxacb1, ferredoxin-fold anticodon binding domain containing 1, [RH, Score=104, Expect=6e-23]} {Celegans: WBGene00012768, eef-1B.2, Probable elongation factor 1-beta/1-delta 2, [RH, Score=54.7, Expect=1e-07]} {Smed: dd_Smed_v6_12236_0_1, dd_Smed_v6_12236_0_1, [RH, Score=98.2, Expect=2e-21]} {RNA1310_10541} {RNA815_15665}
21.	MligTC455_22962	100	2.07	Mlig455_010565	Neo: - Age: -	APC	0.95	-	-	-	-	-	0.950	Mlig455_010565 {REF} {Length: 6539} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=23.0]} {Human: ENSG00000134982, APC, APC, WNT signaling pathway regulator, [Score=204, Expect=6e-53]; ENSG00000115266, APC2, APC2, WNT signaling pathway regulator, [Score=195, Expect=7e-52]} {Mouse: ENSMUSG00000020135, Apc2, adenomatosis polyposis coli 2, [Score=204, Expect=2e-53]; ENSMUSG00000005871, Apc, adenomatosis polyposis coli, [Score=204, Expect=2e-53]} {Dmel: FBgn0015589, Apc, APC-like, [Score=178, Expect=2e-45]} {Celegans: WBGene00000156, apr-1, Adenomatous polyposis coli protein-related protein 1, [Score=121, Expect=1e-27]} {Smed: dd_Smed_v6_6966_0_1, dd_Smed_v6_6966_0_1, [Score=179, Expect=8e-46]} {RNA1509_49785} {RNA1310_20969} {RNA815_51542}
22.	MligTC455_28408	47	0.98	Mlig455_055493	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_055493 {REF} {Length: 5141} {RNA1509_42084} {RNA1310_16069} {RNA815_21447}
23.	MligTC455_53301	124	2.59	Mlig455_045526, Mlig455_065717	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.551	BNC2	0.95	-	-	-	-	-	0.950	Mlig455_045526 {REF} {Length: 3532} {Human: ENSG00000173068, BNC2, basonuclin 2, [RH, Score=195, Expect=5e-51]} {Mouse: ENSMUSG00000028487, Bnc2, basonuclin 2, [RH, Score=195, Expect=4e-51]} {Dmel: FBgn0285879, disco-r, disco-related, [RH, Score=102, Expect=1e-21]} {Celegans: WBGene00044791, bnc-1, BasoNuClin-1 zinc finger protein homolog, [RH, Score=80.1, Expect=8e-17]} {Smed: dd_Smed_v6_18947_0_1, dd_Smed_v6_18947_0_1, [RH, Score=160, Expect=1e-41]} {RNA1310_47662} {RNA815_36499} Mlig455_065717 {REF} {Length: 3299} {Human: ENSG00000173068, BNC2, basonuclin 2, [RH, Score=197, Expect=1e-51]} {Mouse: ENSMUSG00000028487, Bnc2, basonuclin 2, [RH, Score=198, Expect=7e-52]} {Dmel: FBgn0285879, disco-r, disco-related, [RH, Score=102, Expect=1e-21]} {Celegans: WBGene00044791, bnc-1, BasoNuClin-1 zinc finger protein homolog, [RH, Score=79.7, Expect=1e-16]} {Smed: dd_Smed_v6_18947_0_1, dd_Smed_v6_18947_0_1, [RH, Score=161, Expect=6e-42]} {RNA1310_47662} {RNA815_36499}