TomoSeq data search

Data search

Results for MligTC455_20888

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20888

20

0.41

Mlig455_024767, Mlig455_066112

Neo: -

Age: -

Mlig455_024767 {REF} {Length: 4018} {NoTransDecoderORF} {RNA1509_33990} {RNA1310_21330.1} {RNA815_25009.1}

Mlig455_066112 {REF} {Length: 265} {NoTransDecoderORF} {RNA1310_140516}

Cumulative graph for MligTC455_20888

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.101	0.93	0.99970	1.00000
RegionR2	1.465	0.93	0.99967	1.00000
RegionR3	1.09	0.93	0.39911	0.92806
RegionR4	0.622	0.93	0.40587	0.73290
RegionR5	0.543	0.93	0.44137	0.80236
RegionR6	-0.285	0.93	0.99973	1.00000
RegionR7	-0.156	0.93	0.99975	1.00000
RegionR8	-0.178	0.93	0.99976	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.667	0.93	0.99995	1.00000
RegenerationR2	3.98	0.93	0.00516	0.11286
RegenerationR3	3.565	0.93	0.03083	0.31413
RegenerationR4	2.732	0.93	0.07126	0.42422
RegenerationR5	2.736	0.93	0.04537	0.34796
RegenerationR6	5.108	0.93	0.00609	0.09468
RegenerationBL	3.411	0.93	0.16720	0.49010
RegenerationTP	0.891	0.93	1.00000	1.00000

Genes with expression patterns similar to MligTC455_20888

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20888	20	0.41	Mlig455_024767, Mlig455_066112	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_024767 {REF} {Length: 4018} {NoTransDecoderORF} {RNA1509_33990} {RNA1310_21330.1} {RNA815_25009.1} Mlig455_066112 {REF} {Length: 265} {NoTransDecoderORF} {RNA1310_140516}
2.	MligTC455_33349	58	1.2	Mlig455_025777, Mlig455_040959, Mlig455_050539	Neo: - Age: -	THAP1, THAP9, TLR4	0.981	-	-	-	-	0.981	-	Mlig455_025777 {REF} {Length: 3515} {Human: ENSG00000168152, THAP9, THAP domain containing 9, [Score=216, Expect=1e-59]} {RNA1509_26759, RNA1509_41475} {RNA1310_2122.1, RNA1509_41475} {RNA1509_41475, RNA815_20503} Mlig455_040959 {REF} {Length: 569} {Pfam: THAP domain [PF05485.14, score=67.9]} {Human: ENSG00000131931, THAP1, THAP domain containing 1, [Score=63.5, Expect=1e-10]; ENSG00000173451, THAP2, THAP domain containing 2, [Score=63.2, Expect=2e-10]} {Mouse: ENSMUSG00000037214, Thap1, THAP domain containing, apoptosis associated protein 1, [Score=63.9, Expect=5e-11]; ENSMUSG00000020137, Thap2, THAP domain containing, apoptosis associated protein 2, [Score=62.4, Expect=2e-10]} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=65.9, Expect=7e-11]} {RNA1509_26759} {RNA1310_2122.1} {RNA815_30707} Mlig455_050539 {REF} {Length: 7351} {Pfam: Leucine rich repeat [PF13855.8, score=87.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=65.9]; TIR domain [PF01582.22, score=26.4]; Leucine Rich Repeat [PF00560.35, score=25.0]; TIR domain [PF13676.8, score=21.7]} {Human: ENSG00000136869, TLR4, toll like receptor 4, [Score=83.6, Expect=9e-16]} {Mouse: ENSMUSG00000030600, Lrfn1, leucine rich repeat and fibronectin type III domain containing 1, [Score=70.1, Expect=9e-12]; ENSMUSG00000036957, Lrfn3, leucine rich repeat and fibronectin type III domain containing 3, [Score=67.4, Expect=5e-11]} {Dmel: FBgn0026760, Tehao, [Score=82.0, Expect=1e-15]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=53.5, Expect=6e-07]} {RNA1509_41475} {RNA1310_2122.1} {RNA815_20503}
3.	MligTC455_11887	27	0.57	Mlig455_050355	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_050355 {REF} {Length: 2140} {RNA1509_38191} {RNA1310_5321.1} {RNA815_12734}
4.	MligTC455_18706	65	1.36	Mlig455_049127	Neo: - Age: Down-Up-Down		0.952	-	-	-	-	0.952	-	Mlig455_049127 {REF} {Length: 3316} {RNA1509_38020} {RNA1310_26284.1, RNA1509_38020} {RNA1509_38020, RNA815_13453}

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