Data search
Results for MligTC455_18706
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18706 | 65 | 1.36 | Mlig455_049127 | Neo: - Age: Down-Up-Down |
Mlig455_049127 {REF} {Length: 3316} {RNA1509_38020} {RNA1310_26284.1, RNA1509_38020} {RNA1509_38020, RNA815_13453} |
Cumulative graph for MligTC455_18706
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.937 | 1.569 | 0.47697 | 1.00000 | |
| RegionR2 | 2.195 | 1.569 | 0.07485 | 0.33452 | |
| RegionR3 | -0.794 | 1.569 | 0.98294 | 1.00000 | |
| RegionR4 | -0.216 | 1.569 | 0.91637 | 1.00000 | |
| RegionR5 | -0.748 | 1.569 | 0.97984 | 1.00000 | |
| RegionR6 | -0.051 | 1.569 | 0.88195 | 1.00000 | |
| RegionR7 | 1.28 | 1.569 | 0.40043 | 1.00000 | |
| RegionR8 | 2.27 | 1.569 | 0.16229 | 0.72889 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.264 | 1.569 | 0.99993 | 1.00000 | |
| RegenerationR2 | 0.459 | 1.569 | 0.50486 | 0.87320 | |
| RegenerationR3 | 1.511 | 1.569 | 0.16418 | 0.59866 | |
| RegenerationR4 | 0.919 | 1.569 | 0.35412 | 0.78326 | |
| RegenerationR5 | 0.567 | 1.569 | 0.54835 | 0.88494 | |
| RegenerationR6 | 1.277 | 1.569 | 0.21651 | 0.56078 | |
| RegenerationBL | 0.16 | 1.569 | 0.90138 | 1.00000 | |
| RegenerationTP | -1.095 | 1.569 | 0.44749 | 0.86564 |
Genes with expression patterns similar to MligTC455_18706
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18706 | 65 | 1.36 | Mlig455_049127 | Neo: - Age: Down-Up-Down |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049127 {REF} {Length: 3316} {RNA1509_38020} {RNA1310_26284.1, RNA1509_38020} {RNA1509_38020, RNA815_13453} | |
| 2. | MligTC455_47840 | 157 | 3.26 | Mlig455_047942 | Neo: - Age: Down-Up-Down |
2.553 | 0.786 | - | - | - | 0.813 | 0.954 | Mlig455_047942 {REF} {Length: 2066} {TRANSSPLICED} {Smed: dd_Smed_v6_9778_0_4, dd_Smed_v6_9778_0_4, [RH, Score=255, Expect=2e-83]} {RNA1509_19568, RNA1509_39726} {RNA1310_16157, RNA1509_19568, RNA1509_39726} {RNA1509_19568, RNA1509_39726, RNA815_7435.1} | |
| 3. | MligTC455_48170 | 120 | 2.49 | Mlig455_006527, Mlig455_070665 | Neo: - Age: - Region-enriched R7: 3.768/0.04650 |
PCDH17 | 1.868 | - | - | 0.983 | 0.885 | - | - | Mlig455_006527 {REF} {Length: 3880} {Pfam: Cadherin domain [PF00028.19, score=304.2]; Cadherin-like [PF16184.7, score=28.3]; Cadherin-like [PF08266.14, score=24.0]} {Human: ENSG00000118946, PCDH17, protocadherin 17, [RH, Score=273, Expect=8e-77]} {Mouse: ENSMUSG00000035566, Pcdh17, protocadherin 17, [RH, Score=276, Expect=2e-76]} {Dmel: FBgn0284247, ds, dachsous, [Score=246, Expect=5e-66]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=177, Expect=8e-45]} {Smed: dd_Smed_v6_17019_0_2, dd_Smed_v6_17019_0_2, [RH, Score=345, Expect=1e-101]} {RNA1509_45762} {RNA1310_4962} {RNA815_31557} Mlig455_070665 {REF} {Length: 3977} {Pfam: Cadherin domain [PF00028.19, score=304.6]; Cadherin-like [PF16184.7, score=28.6]; Cadherin-like [PF08266.14, score=24.1]} {Human: ENSG00000118946, PCDH17, protocadherin 17, [RH, Score=273, Expect=5e-77]} {Mouse: ENSMUSG00000035566, Pcdh17, protocadherin 17, [RH, Score=276, Expect=1e-76]} {Dmel: FBgn0284247, ds, dachsous, [Score=246, Expect=5e-66]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=176, Expect=2e-44]} {Smed: dd_Smed_v6_17019_0_2, dd_Smed_v6_17019_0_2, [RH, Score=345, Expect=7e-102]} {RNA1509_45762} {RNA1310_4962, RNA1509_45762} {RNA1509_45762, RNA815_31557} |
| 4. | MligTC455_27519 | 136 | 2.83 | Mlig455_006410 | Neo: - Age: Down-Down-Up |
CRB2 | 1.816 | - | - | 0.966 | - | 0.850 | - | Mlig455_006410 {REF} {Length: 4122} {Pfam: EGF-like domain [PF00008.29, score=130.3]; Human growth factor-like EGF [PF12661.9, score=68.3]; Laminin G domain [PF02210.26, score=25.2]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=326, Expect=6e-93]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=323, Expect=4e-92]} {Dmel: FBgn0259685, crb, crumbs, [Score=377, Expect=7e-109]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=212, Expect=2e-55]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=186, Expect=1e-47]} {RNA1509_50019} {RNA1310_5116.1} {RNA815_693.1} |
| 5. | MligTC455_11299 | 24 | 0.5 | Mlig455_059556 | Neo: - Age: - |
0.99 | - | - | 0.990 | - | - | - | Mlig455_059556 {REF} {Length: 793} | |
| 6. | MligTC455_11297 | 26 | 0.54 | Mlig455_057378 | Neo: - Age: - |
0.987 | - | - | 0.987 | - | - | - | Mlig455_057378 {REF} {Length: 795} | |
| 7. | MligTC455_11298 | 26 | 0.54 | Mlig455_057401 | Neo: - Age: - |
0.987 | - | - | 0.987 | - | - | - | Mlig455_057401 {REF} {Length: 793} | |
| 8. | MligTC455_42104 | 25 | 0.52 | Mlig455_057718 | Neo: - Age: - |
ARID3A | 0.981 | - | - | 0.981 | - | - | - | Mlig455_057718 {REF} {Length: 2795} {Pfam: ARID/BRIGHT DNA binding domain [PF01388.23, score=72.5]} {Human: ENSG00000116017, ARID3A, AT-rich interaction domain 3A, [RH, Score=244, Expect=2e-71]; ENSG00000205143, ARID3C, AT-rich interaction domain 3C, [RH, Score=242, Expect=1e-72]} {Mouse: ENSMUSG00000019564, Arid3a, AT rich interactive domain 3A (BRIGHT-like), [RH, Score=247, Expect=1e-72]; ENSMUSG00000066224, Arid3c, AT rich interactive domain 3C (BRIGHT-like), [RH, Score=245, Expect=2e-74]} {Dmel: FBgn0004795, retn, retained, [RH, Score=241, Expect=2e-68]} {Celegans: WBGene00000476, cfi-1, AT-rich interactive domain-containing protein cfi-1, [RH, Score=231, Expect=3e-68]} {Smed: dd_Smed_v6_13474_0_1, dd_Smed_v6_13474_0_1, [RH, Score=259, Expect=1e-77]} {RNA1509_54880} {RNA1310_44805} {RNA815_49768} |
| 9. | MligTC455_22439 | 124 | 2.58 | Mlig455_002461 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.387 Region-enriched R2: 3.193/0.01798 |
0.979 | - | - | - | - | - | 0.979 | Mlig455_002461 {REF} {Length: 3179} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=78.5]; Protein of unknown function (DUF775) [PF05603.14, score=20.1]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=160, Expect=3e-41]} {RNA1509_15390, RNA1509_53623} {RNA1310_4628, RNA1509_15390, RNA1509_53623} {RNA1509_15390, RNA1509_53623, RNA815_1374} | |
| 10. | MligTC455_14761 | 47 | 0.99 | Mlig455_059635 | Neo: - Age: Down-Up-Down |
RNF150 | 0.973 | - | - | - | - | 0.973 | - | Mlig455_059635 {REF} {Length: 1851} {Pfam: Ring finger domain [PF13639.8, score=41.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=35.8]; RING-type zinc-finger [PF13445.8, score=32.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=31.6]; RING-H2 zinc finger domain [PF12678.9, score=31.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=30.2]; Prokaryotic RING finger family 4 [PF14447.8, score=27.0]; zinc-RING finger domain [PF14634.8, score=26.0]; RING-like zinc finger [PF17123.7, score=25.5]; Zinc-ribbon, C4HC2 type [PF17120.7, score=19.0]} {Human: ENSG00000170153, RNF150, ring finger protein 150, [Score=57.4, Expect=9e-09]; ENSG00000113269, RNF130, ring finger protein 130, [Score=57.4, Expect=1e-08]; ENSG00000159461, AMFR, autocrine motility factor receptor, [Score=55.5, Expect=3e-08]} {Mouse: ENSMUSG00000020376, Rnf130, ring finger protein 130, [Score=57.8, Expect=6e-09]; ENSMUSG00000047747, Rnf150, ring finger protein 150, [Score=55.8, Expect=3e-08]; ENSMUSG00000031751, Amfr, autocrine motility factor receptor, [Score=55.1, Expect=6e-08]} {Dmel: FBgn0034312, CG10916, [Score=58.2, Expect=2e-09]} {Celegans: WBGene00009164, hrdl-1, E3 ubiquitin-protein ligase hrd-like protein 1, [Score=52.0, Expect=4e-07]} {Smed: dd_Smed_v6_5532_0_1, dd_Smed_v6_5532_0_1, [Score=57.8, Expect=3e-09]} {RNA1509_44562} {RNA1310_19615.1} {RNA815_8630} |
| 11. | MligTC455_32269 | 47 | 0.98 | Mlig455_064811 | Neo: - Age: - |
0.972 | - | - | 0.972 | - | - | - | Mlig455_064811 {REF} {Length: 1227} {RNA1509_34913} {RNA1310_1330.1} {RNA815_5998} | |
| 12. | MligTC455_25226 | 35 | 0.72 | Mlig455_023978 | Neo: - Age: Up-Down-Down |
0.966 | - | - | - | - | 0.966 | - | Mlig455_023978 {REF} {Length: 5232} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=23.1]} {RNA1509_49686} {RNA1310_5450.1} {RNA815_16253.2} | |
| 13. | MligTC455_29422 | 884 | 18.42 | Mlig455_007237 | Neo: - Age: - |
PEX2 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_007237 {REF} {Length: 3090} {Pfam: Domain of unknown function (DUF4519) [PF15012.8, score=55.0]; Pex2 / Pex12 amino terminal region [PF04757.16, score=32.6]} {Human: ENSG00000164751, PEX2, peroxisomal biogenesis factor 2, [Score=58.9, Expect=3e-09]} {Mouse: ENSMUSG00000040374, Pex2, peroxisomal biogenesis factor 2, [RH, Score=72.4, Expect=6e-14]} {Smed: dd_Smed_v6_11478_0_1, dd_Smed_v6_11478_0_1, [Score=55.1, Expect=1e-08]} {RNA1509_35015, RNA1509_49188} {RNA1310_38428, RNA1509_35015, RNA1509_49188} {RNA1509_35015, RNA1509_49188, RNA815_18812} |
| 14. | MligTC455_22304 | 58 | 1.21 | Mlig455_005828 | Neo: - Age: - |
ZNFX1 | 0.962 | - | - | 0.962 | - | - | - | Mlig455_005828 {REF} {Length: 7532} {Pfam: AAA domain [PF13086.8, score=90.3]; AAA domain [PF13245.8, score=34.9]; AAA domain [PF13604.8, score=27.5]; PhoH-like protein [PF02562.18, score=21.8]; AAA domain [PF13401.8, score=20.3]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=132, Expect=2e-31]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=124, Expect=9e-29]} {Dmel: FBgn0039165, CG6204, [Score=100, Expect=3e-21]} {Celegans: WBGene00014208, ZK1067.2, [Score=96.3, Expect=4e-20]} {Smed: dd_Smed_v6_2581_0_1, dd_Smed_v6_2581_0_1, [Score=143, Expect=5e-35]} {RNA1509_44728} {RNA1310_282.2} {RNA815_251.1} |
| 15. | MligTC455_54332 | 77 | 1.61 | Mlig455_067675 | Neo: - Age: Up-Down-Down |
BMP1 | 0.959 | - | - | 0.959 | - | - | - | Mlig455_067675 {REF} {Length: 4231} {Pfam: CUB domain [PF00431.22, score=166.3]} {Human: ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=79.3, Expect=2e-14]} {Dmel: FBgn0261262, CG42613, [Score=90.1, Expect=4e-18]} {Celegans: WBGene00004944, sol-1, Suppressor of lurcher protein 1, [RH, Score=75.5, Expect=9e-14]} {Smed: dd_Smed_v6_19493_0_1, dd_Smed_v6_19493_0_1, [Score=258, Expect=1e-73]} {RNA1509_49729} {RNA1310_14031} {RNA815_23434} |
| 16. | MligTC455_37402 | 17 | 0.36 | Mlig455_059423 | Neo: - Age: Up-Down-Down |
0.957 | 0.957 | - | - | - | - | - | Mlig455_059423 {REF} {Length: 3957} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=149.6]; WSC domain [PF01822.21, score=25.8]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=63.2, Expect=9e-10]} {Smed: dd_Smed_v6_21491_0_1, dd_Smed_v6_21491_0_1, [Score=61.6, Expect=1e-09]} {RNA1509_46373} {RNA1310_11892} {RNA815_9334} | |
| 17. | MligTC455_52814 | 47 | 0.97 | Mlig455_047356, Mlig455_047365 | Neo: - Age: - |
CNTN2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_047356 {REF} {Length: 2537} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=57.8]; Immunoglobulin domain [PF13927.8, score=52.6]; Immunoglobulin domain [PF13895.8, score=40.4]; Immunoglobulin domain [PF00047.27, score=40.3]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=25.9]} {Human: ENSG00000184144, CNTN2, contactin 2, [Score=58.5, Expect=3e-08]} {Mouse: ENSMUSG00000053024, Cntn2, contactin 2, [Score=56.6, Expect=8e-08]; ENSMUSG00000061751, Kalrn, kalirin, RhoGEF kinase, [Score=55.1, Expect=2e-07]; ENSMUSG00000020674, Pxdn, peroxidasin, [Score=54.7, Expect=3e-07]} {Dmel: FBgn0264975, Nrg, Neuroglian, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_15129_0_1, dd_Smed_v6_15129_0_1, [RH, Score=99.8, Expect=2e-22]} {RNA1509_60115} {RNA1310_31768} {RNA815_18728} Mlig455_047365 {REF} {Length: 3489} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=57.9]; Immunoglobulin domain [PF13927.8, score=52.8]; Immunoglobulin domain [PF13895.8, score=40.5]; Immunoglobulin domain [PF00047.27, score=40.3]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=26.4]} {Human: ENSG00000184144, CNTN2, contactin 2, [Score=57.4, Expect=5e-08]} {Mouse: ENSMUSG00000053024, Cntn2, contactin 2, [Score=55.5, Expect=1e-07]; ENSMUSG00000020674, Pxdn, peroxidasin, [Score=53.9, Expect=5e-07]; ENSMUSG00000061751, Kalrn, kalirin, RhoGEF kinase, [Score=53.5, Expect=6e-07]; ENSMUSG00000055022, Cntn1, contactin 1, [Score=52.8, Expect=1e-06]; ENSMUSG00000030075, Cntn3, contactin 3, [Score=52.8, Expect=1e-06]} {Dmel: FBgn0264975, Nrg, Neuroglian, [Score=55.5, Expect=1e-07]} {Smed: dd_Smed_v6_15129_0_1, dd_Smed_v6_15129_0_1, [RH, Score=99.8, Expect=1e-22]} {RNA1509_60115} {RNA1310_31768} {RNA815_19521} |
| 18. | MligTC455_33512 | 1175 | 24.48 | Mlig455_057379, Mlig455_057402 | Neo: - Age: - Region-enriched R4: 2.938/0.00125 |
0.954 | - | - | - | - | 0.954 | - | Mlig455_057379 {REF} {Length: 2204} {RNA1509_32988} {RNA1310_29363} {RNA815_15857.1} Mlig455_057402 {REF} {Length: 2840} {RNA1509_32988} {RNA1310_29363, RNA1509_32988} {RNA1509_32988, RNA815_15857.1} |
|
| 19. | MligTC455_52823 | 345 | 7.19 | Mlig455_022761 | Neo: - Age: - |
SYT12 | 0.953 | 0.953 | - | - | - | - | - | Mlig455_022761 {REF} {Length: 4686} {Pfam: C2 domain [PF00168.32, score=92.9]} {Human: ENSG00000173227, SYT12, synaptotagmin 12, [RH, Score=231, Expect=2e-71]} {Mouse: ENSMUSG00000049303, Syt12, synaptotagmin XII, [RH, Score=226, Expect=1e-69]} {Dmel: FBgn0261085, Syt12, Synaptotagmin 12, [RH, Score=204, Expect=1e-58]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=156, Expect=4e-43]} {Smed: dd_Smed_v6_8032_0_1, dd_Smed_v6_8032_0_1, [RH, Score=245, Expect=8e-77]} {RNA1509_46840} {RNA1310_23516.1, RNA1509_46840} {RNA1509_46840, RNA815_12887} |
| 20. | MligTC455_20888 | 20 | 0.41 | Mlig455_024767, Mlig455_066112 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_024767 {REF} {Length: 4018} {NoTransDecoderORF} {RNA1509_33990} {RNA1310_21330.1} {RNA815_25009.1} Mlig455_066112 {REF} {Length: 265} {NoTransDecoderORF} {RNA1310_140516} |
|
| 21. | MligTC455_31864 | 159 | 3.31 | Mlig455_060554, Mlig455_066902 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_060554 {REF} {Length: 556} {NoTransDecoderORF} {RNA1310_90364} Mlig455_066902 {REF} {Length: 4898} {Pfam: M-phase-specific PLK1-interacting protein [PF15502.8, score=24.5]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_8149.1} |
Berezikov Lab - 2020-2021 © ERIBA