M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_20905

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20905 22 0.45 Mlig455_012469

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=0.623

 BCAT2 Mlig455_012469 {REF} {Length: 1481} {TRANSSPLICED} {Human: ENSG00000105552, BCAT2, branched chain amino acid transaminase 2, [Score=245, Expect=8e-78]; ENSG00000060982, BCAT1, branched chain amino acid transaminase 1, [Score=236, Expect=2e-74]} {Mouse: ENSMUSG00000030826, Bcat2, branched chain aminotransferase 2, mitochondrial, [Score=240, Expect=5e-76]; ENSMUSG00000030268, Bcat1, branched chain aminotransferase 1, cytosolic, [Score=239, Expect=6e-75]} {Dmel: FBgn0030482, CG1673, [Score=251, Expect=9e-80]} {Celegans: WBGene00001149, bcat-1, Branched-chain-amino-acid aminotransferase, cytosolic, [Score=215, Expect=2e-66]} {Smed: dd_Smed_v6_3721_0_1, dd_Smed_v6_3721_0_1, [Score=242, Expect=3e-77]} {RNA1509_43282} {RNA1310_2318.1} {RNA815_3748.1}

Cumulative graph for MligTC455_20905

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.981 0.816 0.99965 1.00000
RegionR2 2.157 0.816 0.17307 0.51994
RegionR3 -1.04 0.816 0.99966 1.00000
RegionR4 1.809 0.816 0.21133 0.49607
RegionR5 -0.345 0.816 0.99966 1.00000
RegionR6 -1.117 0.816 0.99967 1.00000
RegionR7 1.835 0.816 0.21735 0.83523
RegionR8 -1.32 0.816 0.99971 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.138 0.816 0.99998 1.00000
RegenerationR2 0.575 0.816 0.45770 0.85116
RegenerationR3 1.633 0.816 0.26952 0.70368
RegenerationR4 -2.039 0.816 0.26549 0.71299
RegenerationR5 0.721 0.816 0.35315 0.76609
RegenerationR6 0.989 0.816 0.46585 0.78177
RegenerationBL 1.219 0.816 0.44790 0.81483
RegenerationTP -2.096 0.816 0.99980 1.00000


Genes with expression patterns similar to MligTC455_20905

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20905 22 0.45 Mlig455_012469

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=0.623

 BCAT2 2 - - 1.000 - - 1.000 Mlig455_012469 {REF} {Length: 1481} {TRANSSPLICED} {Human: ENSG00000105552, BCAT2, branched chain amino acid transaminase 2, [Score=245, Expect=8e-78]; ENSG00000060982, BCAT1, branched chain amino acid transaminase 1, [Score=236, Expect=2e-74]} {Mouse: ENSMUSG00000030826, Bcat2, branched chain aminotransferase 2, mitochondrial, [Score=240, Expect=5e-76]; ENSMUSG00000030268, Bcat1, branched chain aminotransferase 1, cytosolic, [Score=239, Expect=6e-75]} {Dmel: FBgn0030482, CG1673, [Score=251, Expect=9e-80]} {Celegans: WBGene00001149, bcat-1, Branched-chain-amino-acid aminotransferase, cytosolic, [Score=215, Expect=2e-66]} {Smed: dd_Smed_v6_3721_0_1, dd_Smed_v6_3721_0_1, [Score=242, Expect=3e-77]} {RNA1509_43282} {RNA1310_2318.1} {RNA815_3748.1}
2. MligTC455_12958 55 1.15 Mlig455_055683

Neo: -

Age: -

 1.839 - - 0.878 - - 0.961 Mlig455_055683 {REF} {Length: 1376}
3. MligTC455_40365 195 4.05 Mlig455_038370

Neo: -

Age: Down-Up-Down

Region-enriched R2: 3.989/0.00156

 1.755 - - 0.799 - - 0.956 Mlig455_038370 {REF} {Length: 3062} {RNA1509_57598} {RNA1310_48414, RNA1509_57598} {RNA1509_57598, RNA815_41099}
4. MligTC455_37508 108 2.26 Mlig455_010524, Mlig455_061849

Neo: -

Age: -

 1.721 - - 0.761 - - 0.960

Mlig455_010524 {REF} {Length: 589} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}

Mlig455_061849 {REF} {Length: 1216} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
5. MligTC455_23314 139 2.9 Mlig455_039680

Neo: -

Age: -

 CACNA2D2 1.706 - - 0.753 - - 0.953 Mlig455_039680 {REF} {Length: 4498} {Pfam: VWA N-terminal [PF08399.13, score=89.9]; Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=86.3]; von Willebrand factor type A domain [PF13768.8, score=38.0]; von Willebrand factor type A domain [PF00092.30, score=36.1]; von Willebrand factor type A domain [PF13519.8, score=31.5]; Cache domain [PF02743.20, score=26.9]} {Human: ENSG00000007402, CACNA2D2, calcium voltage-gated channel auxiliary subunit alpha2delta 2, [RH, Score=340, Expect=6e-98]; ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [RH, Score=328, Expect=3e-94]} {Mouse: ENSMUSG00000010066, Cacna2d2, calcium channel, voltage-dependent, alpha 2/delta subunit 2, [RH, Score=338, Expect=1e-97]; ENSMUSG00000040118, Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1, [RH, Score=330, Expect=4e-95]} {Dmel: FBgn0028863, CG4587, [RH, Score=234, Expect=2e-62]} {Celegans: WBGene00007041, tag-180, [RH, Score=169, Expect=3e-42]} {Smed: dd_Smed_v6_19048_0_1, dd_Smed_v6_19048_0_1, [Score=155, Expect=5e-38]} {RNA1509_48733} {RNA1310_3844, RNA1509_48733} {RNA1509_48733, RNA815_18071}
6. MligTC455_46517 122 2.54 Mlig455_051299

Neo: -

Age: -

Region-enriched R2: 3.450/0.03846

 ERC2 1.689 - - 0.953 - - 0.736 Mlig455_051299 {REF} {Length: 6303} {TRANSSPLICED} {Pfam: RIM-binding protein of the cytomatrix active zone [PF10174.11, score=167.4]; Tropomyosin like [PF12718.9, score=22.2]; Autophagy protein 16 (ATG16) [PF08614.13, score=20.7]} {Human: ENSG00000187672, ERC2, ELKS/RAB6-interacting/CAST family member 2, [Score=143, Expect=1e-33]} {Mouse: ENSMUSG00000040640, Erc2, ELKS/RAB6-interacting/CAST family member 2, [Score=143, Expect=6e-34]} {Dmel: FBgn0259246, brp, bruchpilot, [Score=117, Expect=1e-25]} {Smed: dd_Smed_v6_12278_0_1, dd_Smed_v6_12278_0_1, [Score=211, Expect=9e-55]} {RNA1509_45174, RNA1509_45537} {RNA1310_5220.1, RNA1509_45537} {RNA1509_45537, RNA815_13350}
7. MligTC455_49490 48 1 Mlig455_054769

Neo: -

Age: -

 1.689 - - 0.711 - - 0.978 Mlig455_054769 {REF} {Length: 1663} {RNA1509_22234} {RNA1310_23973} {RNA815_10832}
8. MligTC455_22712 451 9.39 Mlig455_036500, Mlig455_056387

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.479

Regeneration-upregulated BL: 3.623

Regeneration-enriched BL: 3.623

 CASZ1 1.675 - - 0.701 - - 0.974

Mlig455_036500 {REF} {Length: 3533} {Human: ENSG00000130940, CASZ1, castor zinc finger 1, [RH, Score=266, Expect=1e-73]} {Mouse: ENSMUSG00000028977, Casz1, castor zinc finger 1, [RH, Score=271, Expect=2e-75]} {Dmel: FBgn0004878, cas, castor, [RH, Score=267, Expect=3e-76]} {Smed: dd_Smed_v6_6778_0_1, dd_Smed_v6_6778_0_1, [RH, Score=478, Expect=1e-152]} {RNA1509_38584} {RNA1310_14915, RNA1509_38584} {RNA1509_38584, RNA815_45739}

Mlig455_056387 {REF} {Length: 3535} {Human: ENSG00000130940, CASZ1, castor zinc finger 1, [Score=222, Expect=5e-60]} {Mouse: ENSMUSG00000028977, Casz1, castor zinc finger 1, [Score=223, Expect=2e-60]} {Dmel: FBgn0004878, cas, castor, [Score=219, Expect=4e-61]} {Smed: dd_Smed_v6_6778_0_1, dd_Smed_v6_6778_0_1, [Score=275, Expect=4e-79]} {RNA1509_38584} {RNA1310_14915} {RNA815_45739}
9. MligTC455_00387 32 0.66 Mlig455_025051, Mlig455_025067

Neo: -

Age: -

 0.992 - - - - - 0.992

Mlig455_025051 {REF} {Length: 625} {NoTransDecoderORF}

Mlig455_025067 {REF} {Length: 1006}
10. MligTC455_04227 22 0.45 Mlig455_061453

Neo: -

Age: -

 0.988 - - - - - 0.988 Mlig455_061453 {REF} {Length: 2038} {Pfam: Glycine rich protein [PF12810.9, score=24.7]} {RNA1509_28715} {RNA1310_109445}
11. MligTC455_30312 52 1.09 Mlig455_064890

Neo: -

Age: logFC(26M/2M)=-0.341

 MAP3K19 0.986 - - - - - 0.986 Mlig455_064890 {REF} {Length: 3703} {Pfam: Protein kinase domain [PF00069.27, score=186.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=138.8]; Ankyrin repeats (3 copies) [PF12796.9, score=63.4]; Ankyrin repeats (many copies) [PF13637.8, score=62.5]; Ankyrin repeats (many copies) [PF13857.8, score=41.8]; Ankyrin repeat [PF00023.32, score=37.4]; Ankyrin repeat [PF13606.8, score=31.0]; ABC1 atypical kinase-like domain [PF03109.18, score=28.7]; Fungal protein kinase [PF17667.3, score=27.3]; Phosphotransferase enzyme family [PF01636.25, score=20.7]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=153, Expect=8e-40]; ENSG00000072786, STK10, serine/threonine kinase 10, [Score=151, Expect=6e-38]; ENSG00000065613, SLK, STE20 like kinase, [Score=147, Expect=2e-36]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=157, Expect=2e-41]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=149, Expect=4e-38]} {Celegans: WBGene00022603, gck-2, Mitogen-activated protein kinase kinase kinase kinase, [Score=135, Expect=4e-33]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=140, Expect=4e-37]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}
12. MligTC455_37838 40 0.83 Mlig455_012885

Neo: -

Age: Up-Down-Down

 PKDREJ 0.984 - - - - - 0.984 Mlig455_012885 {REF} {Length: 13341} {Pfam: Polycystin cation channel [PF08016.14, score=221.2]; REJ domain [PF02010.17, score=52.8]; PLAT/LH2 domain [PF01477.25, score=27.5]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=184, Expect=7e-46]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [Score=186, Expect=7e-47]; ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=178, Expect=3e-44]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=110, Expect=6e-24]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=121, Expect=3e-27]} {Smed: dd_Smed_v6_15525_0_2, dd_Smed_v6_15525_0_2, [Score=260, Expect=1e-69]} {RNA1509_38015} {RNA1310_23208, RNA1509_38015} {RNA1509_38015, RNA815_31966}
13. MligTC455_30323 14 0.29 Mlig455_033982

Neo: -

Age: -

 0.982 - - 0.982 - - - Mlig455_033982 {REF} {Length: 1701} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_29299} {RNA1310_6073.2} {RNA815_6982}
14. MligTC455_46098 66 1.37 Mlig455_058029, Mlig455_058164, Mlig455_058220

Neo: -

Age: -

 LIN28B 0.981 - - - - - 0.981

Mlig455_058029 {REF} {Length: 2395} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=79.9]; Zinc knuckle [PF00098.25, score=35.9]} {Human: ENSG00000187772, LIN28B, lin-28 homolog B, [RH, Score=130, Expect=1e-35]; ENSG00000131914, LIN28A, lin-28 homolog A, [RH, Score=127, Expect=4e-35]} {Mouse: ENSMUSG00000050966, Lin28a, lin-28 homolog A (C. elegans), [RH, Score=127, Expect=2e-35]} {Dmel: FBgn0035626, lin-28, [RH, Score=150, Expect=7e-45]} {Celegans: WBGene00003014, lin-28, [RH, Score=115, Expect=3e-31]} {Smed: dd_Smed_v6_17304_0_1, dd_Smed_v6_17304_0_1, [RH, Score=192, Expect=1e-61]}

Mlig455_058164 {REF} {Length: 2624} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=80.2]; Zinc knuckle [PF00098.25, score=36.4]} {Human: ENSG00000187772, LIN28B, lin-28 homolog B, [RH, Score=130, Expect=3e-36]; ENSG00000131914, LIN28A, lin-28 homolog A, [RH, Score=127, Expect=1e-35]} {Mouse: ENSMUSG00000050966, Lin28a, lin-28 homolog A (C. elegans), [RH, Score=128, Expect=5e-36]} {Dmel: FBgn0035626, lin-28, [RH, Score=151, Expect=2e-45]} {Celegans: WBGene00003014, lin-28, [RH, Score=115, Expect=4e-31]} {Smed: dd_Smed_v6_17304_0_1, dd_Smed_v6_17304_0_1, [RH, Score=193, Expect=2e-62]}

Mlig455_058220 {REF} {Length: 2982} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=80.1]; Zinc knuckle [PF00098.25, score=36.3]} {Human: ENSG00000187772, LIN28B, lin-28 homolog B, [RH, Score=130, Expect=1e-36]; ENSG00000131914, LIN28A, lin-28 homolog A, [RH, Score=127, Expect=1e-35]} {Mouse: ENSMUSG00000050966, Lin28a, lin-28 homolog A (C. elegans), [RH, Score=127, Expect=8e-36]} {Dmel: FBgn0035626, lin-28, [RH, Score=150, Expect=4e-45]} {Celegans: WBGene00003014, lin-28, [RH, Score=115, Expect=5e-31]} {Smed: dd_Smed_v6_17304_0_1, dd_Smed_v6_17304_0_1, [RH, Score=192, Expect=4e-62]}
15. MligTC455_38010 38 0.79 Mlig455_059485

Neo: -

Age: -

 0.979 - - - - - 0.979 Mlig455_059485 {REF} {Length: 1213} {Pfam: Lectin C-type domain [PF00059.23, score=24.8]} {RNA1509_20946} {RNA1310_35102} {RNA815_16139}
16. MligTC455_08898 44 0.91 Mlig455_023398, Mlig455_045568

Neo: -

Age: -

 PRR9 0.978 - - - - - 0.978

Mlig455_023398 {REF} {Length: 1264} {Pfam: Cryptococcal mannosyltransferase 1 [PF11735.10, score=27.2]} {RNA1509_37639} {RNA1310_23440} {RNA815_10032}

Mlig455_045568 {REF} {Length: 8230} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=2e-06]} {RNA1509_37639} {RNA1310_23440, RNA1509_37639} {RNA1509_37639, RNA815_10032}
17. MligTC455_25620 44 0.92 Mlig455_026905

Neo: -

Age: Down-Up-Down

 SDCBP 0.978 - - 0.978 - - - Mlig455_026905 {REF} {Length: 3278} {Pfam: PDZ domain [PF00595.26, score=78.4]; PDZ domain [PF17820.3, score=53.7]; PDZ domain [PF13180.8, score=40.6]} {Human: ENSG00000137575, SDCBP, syndecan binding protein, [Score=53.9, Expect=2e-07]; ENSG00000125775, SDCBP2, syndecan binding protein 2, [Score=51.6, Expect=1e-06]} {Mouse: ENSMUSG00000030838, Ush1c, USH1 protein network component harmonin, [Score=56.2, Expect=7e-08]; ENSMUSG00000028249, Sdcbp, syndecan binding protein, [Score=55.8, Expect=1e-08]; ENSMUSG00000027456, Sdcbp2, syndecan binding protein (syntenin) 2, [Score=53.9, Expect=2e-07]} {Dmel: FBgn0029835, CG5921, [Score=68.2, Expect=1e-11]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [Score=175, Expect=2e-49]} {RNA1509_46792} {RNA1310_11662.1} {RNA815_21959}
18. MligTC455_51228 99 2.07 Mlig455_021448

Neo: -

Age: -

 ANK2 0.978 - - - - - 0.978 Mlig455_021448 {REF} {Length: 6454} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=535.9]; Ankyrin repeat [PF00023.32, score=442.4]; Ankyrin repeats (many copies) [PF13637.8, score=435.7]; Ankyrin repeat [PF13606.8, score=370.1]; Ankyrin repeats (many copies) [PF13857.8, score=364.9]; Ion transport protein [PF00520.33, score=37.4]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=325, Expect=3e-89]; ENSG00000151150, ANK3, ankyrin 3, [Score=323, Expect=2e-88]; ENSG00000029534, ANK1, ankyrin 1, [Score=312, Expect=3e-85]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=352, Expect=2e-97]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [RH, Score=1339, Expect=0.0]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [RH, Score=1296, Expect=0.0]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [RH, Score=1614, Expect=0.0]} {RNA1509_34114} {RNA1310_1922} {RNA815_29851}
19. MligTC455_00307 21 0.44 Mlig455_065049

Neo: -

Age: -

 0.976 - - - - - 0.976 Mlig455_065049 {REF} {Length: 527} {NoTransDecoderORF} {RNA1509_18025} {RNA1310_50423.1} {RNA815_44681}
20. MligTC455_26999 330 6.88 Mlig455_037719, Mlig455_037789

Neo: -

Age: -

 RBM12B 0.975 - - - - - 0.975

Mlig455_037719 {REF} {Length: 3624} {Pfam: Mitochondrial distribution and morphology protein 10 [PF12519.10, score=19.6]} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=58.9, Expect=4e-08]} {RNA1509_40809} {RNA1310_8203} {RNA815_13132}

Mlig455_037789 {REF} {Length: 3262} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=61.2, Expect=7e-09]} {RNA1310_8203} {RNA815_13132}
21. MligTC455_01194 16 0.34 Mlig455_056618

Neo: -

Age: -

Regeneration-upregulated R2: 6.004

Regeneration-enriched R2: 6.004

 0.973 - - - - - 0.973 Mlig455_056618 {REF} {Length: 554} {NoTransDecoderORF} {RNA1310_138054}
22. MligTC455_28725 281 5.84 Mlig455_057062

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.361

Region-enriched R2: 3.359/0.00096

 ANK1 0.971 - - - - - 0.971 Mlig455_057062 {REF} {Length: 9594} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=657.0]; Ankyrin repeats (many copies) [PF13637.8, score=564.6]; Ankyrin repeats (many copies) [PF13857.8, score=451.3]; Ankyrin repeat [PF13606.8, score=367.3]; Ankyrin repeat [PF00023.32, score=184.4]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=148, Expect=9e-35]; ENSG00000145362, ANK2, ankyrin 2, [Score=147, Expect=1e-34]; ENSG00000151150, ANK3, ankyrin 3, [Score=146, Expect=4e-34]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=149, Expect=1e-35]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=149, Expect=4e-35]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=145, Expect=7e-34]; ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=144, Expect=8e-34]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=149, Expect=5e-35]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=135, Expect=2e-31]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=172, Expect=3e-43]} {RNA1509_11517} {RNA1310_203} {RNA815_6981}
23. MligTC455_14397 19 0.39 Mlig455_054949

Neo: -

Age: -

Regeneration-upregulated R2: 6.823

Regeneration-enriched R2: 6.823

 0.97 - - - - - 0.970 Mlig455_054949 {REF} {Length: 334} {NoTransDecoderORF} {RNA1509_4874} {RNA1310_21051.1} {RNA815_3659}
24. MligTC455_40152 71 1.48 Mlig455_044652

Neo: -

Age: -

 CALML3 0.969 - - - - - 0.969 Mlig455_044652 {REF} {Length: 973} {Pfam: EF hand [PF00036.34, score=85.2]; EF-hand domain pair [PF13499.8, score=84.3]; EF-hand domain [PF13405.8, score=70.9]; EF-hand domain pair [PF13833.8, score=61.0]; EF hand [PF13202.8, score=51.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=36.6]; EF-hand domain [PF14658.8, score=21.5]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=94.0, Expect=2e-24]} {Mouse: ENSMUSG00000033765, Calm4, calmodulin 4, [Score=86.3, Expect=1e-21]} {Dmel: FBgn0033238, azot, ahuizotl, [Score=76.3, Expect=7e-18]} {Celegans: WBGene00006583, tnc-2, Troponin C, isoform 2, [Score=63.5, Expect=4e-13]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=96.3, Expect=1e-25]} {RNA1310_41156} {RNA815_20058}
25. MligTC455_41882 38 0.79 Mlig455_068617

Neo: -

Age: Down-Up-Down

 FGFR1OP 0.969 - - - - - 0.969 Mlig455_068617 {REF} {Length: 3810} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=38.7]; LisH [PF16045.7, score=17.7]} {Human: ENSG00000213066, FGFR1OP, FGFR1 oncogene partner, [RH, Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000069135, Fgfr1op, Fgfr1 oncogene partner, [RH, Score=97.4, Expect=1e-21]} {Smed: dd_Smed_v6_5371_0_1, dd_Smed_v6_5371_0_1, [Score=57.4, Expect=5e-09]} {RNA1509_14615} {RNA1310_14786} {RNA815_10750}
26. MligTC455_10907 39 0.81 Mlig455_030325

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_030325 {REF} {Length: 1588} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=21.2]} {RNA1310_27913} {RNA815_25050}
27. MligTC455_27591 24 0.5 Mlig455_021100

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_021100 {REF} {Length: 1478} {RNA1509_46103} {RNA1310_81900} {RNA815_8813.1}
28. MligTC455_52494 100 2.08 Mlig455_013751

Neo: -

Age: -

Region-enriched R6: 6.660/0.00069

 BEST4 0.968 - - - - - 0.968 Mlig455_013751 {REF} {Length: 1713} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=176.9]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=187, Expect=2e-53]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=181, Expect=2e-50]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=198, Expect=6e-56]} {Celegans: WBGene00022797, best-24, Bestrophin homolog 24, [Score=168, Expect=1e-45]} {Smed: dd_Smed_v6_22175_0_4, dd_Smed_v6_22175_0_4, [Score=295, Expect=7e-95]} {RNA1310_16906} {RNA815_14720}
29. MligTC455_22429 49 1.02 Mlig455_011037

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_011037 {REF} {Length: 3888} {Pfam: WS/DGAT C-terminal domain [PF06974.15, score=54.7]; ZIP Zinc transporter [PF02535.24, score=18.9]; Transcriptional regulator of RNA polII, SAGA, subunit [PF12767.9, score=18.7]; Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) [PF05091.14, score=18.2]} {Smed: dd_Smed_v6_7004_0_1, dd_Smed_v6_7004_0_1, [Score=150, Expect=6e-37]} {RNA1310_98904}
30. MligTC455_56336 20 0.42 Mlig455_005736

Neo: -

Age: -

Regeneration-enriched R3: 8.275
Regeneration-enriched R4: 8.133
Regeneration-enriched R5: 7.743
Regeneration-enriched R2: 6.547

 0.967 - - - - - 0.967 Mlig455_005736 {REF} {Length: 510} {NoTransDecoderORF} {RNA1310_85720}
31. MligTC455_07084 29 0.61 Mlig455_030713

Neo: -

Age: -

 0.965 - - - - - 0.965 Mlig455_030713 {REF} {Length: 1395} {RNA1509_26375} {RNA1310_32197} {RNA815_16782.1}
32. MligTC455_03321 25 0.52 Mlig455_070046

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_070046 {REF} {Length: 222} {NoTransDecoderORF}
33. MligTC455_15595 114 2.37 Mlig455_009340

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_009340 {REF} {Length: 1538} {TRANSSPLICED} {RNA1310_41965} {RNA815_27810}
34. MligTC455_15662 187 3.89 Mlig455_030386

Neo: -

Age: -

Region-enriched R2: 3.832/0.01388

Regeneration-upregulated BL: 4.705

Regeneration-enriched BL: 4.705

 NR2E1 0.963 - - - - - 0.963 Mlig455_030386 {REF} {Length: 2439} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=98.4]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=73.9]} {Human: ENSG00000112333, NR2E1, nuclear receptor subfamily 2 group E member 1, [RH, Score=190, Expect=8e-54]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [Score=190, Expect=2e-54]} {Dmel: FBgn0003720, tll, tailless, [RH, Score=205, Expect=3e-59]} {Celegans: WBGene00003657, nhr-67, Nuclear hormone receptor family member nhr-67, [RH, Score=194, Expect=1e-55]} {Smed: dd_Smed_v6_21347_0_1, dd_Smed_v6_21347_0_1, [RH, Score=189, Expect=4e-54]} {RNA1509_39776} {RNA1310_21550} {RNA815_27099.1}
35. MligTC455_31116 27 0.55 Mlig455_057067

Neo: -

Age: -

 ADAM9 0.963 - - - - - 0.963 Mlig455_057067 {REF} {Length: 7999} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=123.8]; ADAM cysteine-rich [PF08516.14, score=69.0]; Disintegrin [PF00200.25, score=67.1]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=39.7]} {Human: ENSG00000168615, ADAM9, ADAM metallopeptidase domain 9, [Score=247, Expect=2e-67]} {Mouse: ENSMUSG00000014725, Adam28, a disintegrin and metallopeptidase domain 28, [Score=252, Expect=1e-69]; ENSMUSG00000031555, Adam9, a disintegrin and metallopeptidase domain 9 (meltrin gamma), [Score=248, Expect=1e-67]} {Dmel: FBgn0265140, Meltrin, [Score=281, Expect=3e-76]} {Celegans: WBGene00000074, adm-2, ADAM (Disintegrin plus metalloprotease) family, [Score=248, Expect=2e-67]} {Smed: dd_Smed_v6_5143_0_1, dd_Smed_v6_5143_0_1, [Score=212, Expect=1e-55]} {RNA1509_44914} {RNA1310_9319.1} {RNA815_4173.1}
36. MligTC455_25403 79 1.66 Mlig455_036259, Mlig455_040819

Neo: -

Age: Up-Down-Up

 GVQW3 0.962 - - 0.962 - - -

Mlig455_036259 {REF} {Length: 1703} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=38.6]; Homeodomain-like domain [PF13565.8, score=30.1]; HTH domain in Mos1 transposase [PF17906.3, score=25.3]; Winged helix-turn helix [PF13551.8, score=18.5]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=56.2, Expect=1e-08]} {RNA1509_55432} {RNA1310_7362.1} {RNA815_6705.1}

Mlig455_040819 {REF} {Length: 1465} {Pfam: Putative DNA-binding domain [PF04326.16, score=33.6]} {RNA1509_47755} {RNA1310_37975} {RNA815_40947}
37. MligTC455_39724 59 1.22 Mlig455_026218

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_026218 {REF} {Length: 448} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_87210} {RNA815_14978}
38. MligTC455_13046 94 1.96 Mlig455_027003, Mlig455_043462

Neo: -

Age: -

 0.961 - - - - - 0.961

Mlig455_027003 {REF} {Length: 2071} {NoTransDecoderORF} {RNA1509_31427} {RNA1310_20953.1} {RNA815_18897.1}

Mlig455_043462 {REF} {Length: 746} {NoTransDecoderORF} {RNA1310_97651}
39. MligTC455_57742 31 0.66 Mlig455_062810

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_062810 {REF} {Length: 356} {NoTransDecoderORF}
40. MligTC455_15164 23 0.47 Mlig455_057743

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_057743 {REF} {Length: 1373} {Pfam: Glycine rich protein [PF12810.9, score=25.6]} {RNA1310_45253} {RNA815_29629}
41. MligTC455_46048 31 0.64 Mlig455_060908

Neo: -

Age: -

 0.959 - - 0.959 - - - Mlig455_060908 {REF} {Length: 4385} {RNA1509_22124} {RNA1310_13120} {RNA815_10355}
42. MligTC455_48818 152 3.17 Mlig455_060184

Neo: -

Age: Down-Up-Down

 0.959 - - - - - 0.959 Mlig455_060184 {REF} {Length: 1412} {RNA1310_24049} {RNA815_38965}
43. MligTC455_53276 52 1.07 Mlig455_032898

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_032898 {REF} {Length: 473} {NoTransDecoderORF} {RNA1310_127585} {RNA815_54104}
44. MligTC455_30325 15 0.31 Mlig455_043329

Neo: -

Age: -

 NYNRIN 0.956 - - 0.956 - - - Mlig455_043329 {REF} {Length: 3260} {Pfam: Integrase zinc binding domain [PF17921.3, score=79.6]; Integrase core domain [PF00665.28, score=56.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=118, Expect=7e-27]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=122, Expect=3e-28]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=207, Expect=1e-59]} {RNA1509_29299} {RNA1310_18534} {RNA815_7746}
45. MligTC455_30326 16 0.34 Mlig455_043331

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_043331 {REF} {Length: 1862} {RNA1509_29299} {RNA1310_70970} {RNA815_35302}
46. MligTC455_38112 144 3 Mlig455_035800, Mlig455_068307

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.078

 0.956 - - - - - 0.956

Mlig455_035800 {REF} {Length: 440} {NoTransDecoderORF}

Mlig455_068307 {REF} {Length: 195} {NoTransDecoderORF}
47. MligTC455_40859 58 1.2 Mlig455_009533

Neo: -

Age: -

 TRIOBP 0.955 - - - - - 0.955 Mlig455_009533 {REF} {Length: 2328} {Human: ENSG00000100106, TRIOBP, TRIO and F-actin binding protein, [Score=58.2, Expect=8e-09]}
48. MligTC455_56643 11 0.23 Mlig455_002103

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_002103 {REF} {Length: 238} {NoTransDecoderORF} {RNA1310_102097} {RNA815_53280}
49. MligTC455_56644 11 0.23 Mlig455_002211

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_002211 {REF} {Length: 492} {NoTransDecoderORF} {RNA1310_102097} {RNA815_53280}
50. MligTC455_14102 31 0.65 Mlig455_006004

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_006004 {REF} {Length: 1106} {RNA1310_32319} {RNA815_18072}
51. MligTC455_27536 53 1.11 Mlig455_006510

Neo: -

Age: Up-Down-Up

 CRB2 0.954 - - 0.954 - - - Mlig455_006510 {REF} {Length: 3962} {Pfam: EGF-like domain [PF00008.29, score=147.3]; Human growth factor-like EGF [PF12661.9, score=81.6]; Laminin G domain [PF02210.26, score=28.2]; EGF domain [PF12947.9, score=19.3]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [RH, Score=354, Expect=2e-102]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [RH, Score=356, Expect=2e-103]} {Dmel: FBgn0259685, crb, crumbs, [Score=397, Expect=1e-115]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=189, Expect=5e-48]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=197, Expect=8e-51]} {RNA1509_54879} {RNA1310_14888.1, RNA1509_54879} {RNA1509_54879, RNA815_693.1}
52. MligTC455_41840 89 1.86 Mlig455_070879

Neo: -

Age: logFC(26M/2M)=1.973

 KCNT2 0.954 - - - - - 0.954 Mlig455_070879 {REF} {Length: 2497} {Human: ENSG00000162687, KCNT2, potassium sodium-activated channel subfamily T member 2, [Score=385, Expect=1e-121]; ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [Score=385, Expect=1e-120]} {Mouse: ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [Score=384, Expect=2e-121]; ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [Score=382, Expect=1e-119]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [Score=455, Expect=5e-146]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [Score=347, Expect=6e-108]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [Score=476, Expect=5e-156]} {RNA1509_17871} {RNA1310_1587.3} {RNA815_1330}
53. MligTC455_13251 89 1.86 Mlig455_005191

Neo: -

Age: logFC(26M/2M)=-0.503

 0.953 - - - - - 0.953 Mlig455_005191 {REF} {Length: 651} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=36.6]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=41.2, Expect=9e-06]} {RNA1509_40279} {RNA1310_35227} {RNA815_50075}
54. MligTC455_54117 68 1.41 Mlig455_035190

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_035190 {REF} {Length: 2042} {Pfam: WSC domain [PF01822.21, score=51.2]; PAN domain [PF00024.28, score=28.9]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=47.4, Expect=8e-06]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=51.6, Expect=2e-07]} {RNA1509_45595} {RNA1310_44717} {RNA815_32019}
55. MligTC455_05581 42 0.87 Mlig455_005887

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_005887 {REF} {Length: 906} {NoTransDecoderORF}
56. MligTC455_25534 310 6.46 Mlig455_000181

Neo: -

Age: logFC(26M/2M)=-0.492

 0.951 - - - - - 0.951 Mlig455_000181 {REF} {Length: 1867} {TRANSSPLICED} {Pfam: Lectin C-type domain [PF00059.23, score=32.2]} {RNA1509_57829} {RNA1310_16312, RNA1509_57829} {RNA1509_57829, RNA815_15052}
57. MligTC455_41104 104 2.17 Mlig455_004385

Neo: Int S/G2/M

Age: -

 SSTR1 0.951 - - - - - 0.951 Mlig455_004385 {REF} {Length: 6171} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=139.8]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=28.6]; Olfactory receptor [PF13853.8, score=27.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.9]} {Human: ENSG00000139874, SSTR1, somatostatin receptor 1, [Score=113, Expect=3e-27]; ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=112, Expect=5e-27]; ENSG00000132671, SSTR4, somatostatin receptor 4, [Score=108, Expect=2e-25]; ENSG00000180616, SSTR2, somatostatin receptor 2, [Score=108, Expect=8e-26]} {Mouse: ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=116, Expect=1e-28]; ENSMUSG00000025905, Oprk1, opioid receptor, kappa 1, [Score=113, Expect=1e-27]; ENSMUSG00000035431, Sstr1, somatostatin receptor 1, [Score=112, Expect=3e-27]} {Dmel: FBgn0036790, AstC-R1, Allatostatin C receptor 1, [Score=119, Expect=2e-29]} {Celegans: WBGene00020086, npr-24, NeuroPeptide Receptor family, [Score=109, Expect=2e-26]} {Smed: dd_Smed_v6_17008_0_1, dd_Smed_v6_17008_0_1, [Score=132, Expect=7e-35]} {RNA1509_13787} {RNA1310_33575, RNA1509_13787} {RNA1509_13787, RNA815_48643}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA