Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_01194 | 16 | 0.34 | Mlig455_056618 | Neo: - Age: - Regeneration-upregulated R2: 6.004 Regeneration-enriched R2: 6.004 |
Mlig455_056618 {REF} {Length: 554} {NoTransDecoderORF} {RNA1310_138054} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -1.577 | 0.63 | 1.00000 | 1.00000 | |
RegionR2 | 3.37 | 0.63 | 0.99991 | 1.00000 | |
RegionR3 | 0.359 | 0.63 | 0.99999 | 1.00000 | |
RegionR4 | -2.422 | 0.63 | 0.99993 | 1.00000 | |
RegionR5 | -0.92 | 0.63 | 0.99995 | 1.00000 | |
RegionR6 | 0.281 | 0.63 | 1.00000 | 1.00000 | |
RegionR7 | 0.261 | 0.63 | 0.99999 | 1.00000 | |
RegionR8 | 0.648 | 0.63 | 1.00000 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 5.845 | 0.63 | 0.99996 | 1.00000 | |
RegenerationR2 | 6.004 | 0.63 | 0.00002 | 0.00385 | Specific for R2: 6.004 |
RegenerationR3 | 5.883 | 0.63 | 0.01402 | 0.21721 | |
RegenerationR4 | 4.521 | 0.63 | 0.99984 | 1.00000 | |
RegenerationR5 | 6.585 | 0.63 | 0.00047 | 0.03531 | |
RegenerationR6 | 4.439 | 0.63 | 0.99989 | 1.00000 | |
RegenerationBL | 7.309 | 0.63 | 0.00075 | 0.01891 | |
RegenerationTP | 3.047 | 0.63 | 0.99996 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_01194 | 16 | 0.34 | Mlig455_056618 | Neo: - Age: - Regeneration-upregulated R2: 6.004 Regeneration-enriched R2: 6.004 |
1 | - | - | - | - | - | 1.000 | Mlig455_056618 {REF} {Length: 554} {NoTransDecoderORF} {RNA1310_138054} | |
2. | MligTC455_30312 | 52 | 1.09 | Mlig455_064890 | Neo: - Age: logFC(26M/2M)=-0.341 |
MAP3K19 | 0.989 | - | - | - | - | - | 0.989 | Mlig455_064890 {REF} {Length: 3703} {Pfam: Protein kinase domain [PF00069.27, score=186.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=138.8]; Ankyrin repeats (3 copies) [PF12796.9, score=63.4]; Ankyrin repeats (many copies) [PF13637.8, score=62.5]; Ankyrin repeats (many copies) [PF13857.8, score=41.8]; Ankyrin repeat [PF00023.32, score=37.4]; Ankyrin repeat [PF13606.8, score=31.0]; ABC1 atypical kinase-like domain [PF03109.18, score=28.7]; Fungal protein kinase [PF17667.3, score=27.3]; Phosphotransferase enzyme family [PF01636.25, score=20.7]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=153, Expect=8e-40]; ENSG00000072786, STK10, serine/threonine kinase 10, [Score=151, Expect=6e-38]; ENSG00000065613, SLK, STE20 like kinase, [Score=147, Expect=2e-36]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=157, Expect=2e-41]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=149, Expect=4e-38]} {Celegans: WBGene00022603, gck-2, Mitogen-activated protein kinase kinase kinase kinase, [Score=135, Expect=4e-33]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=140, Expect=4e-37]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1} |
3. | MligTC455_54117 | 68 | 1.41 | Mlig455_035190 | Neo: - Age: - |
0.974 | - | - | - | - | - | 0.974 | Mlig455_035190 {REF} {Length: 2042} {Pfam: WSC domain [PF01822.21, score=51.2]; PAN domain [PF00024.28, score=28.9]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=47.4, Expect=8e-06]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=51.6, Expect=2e-07]} {RNA1509_45595} {RNA1310_44717} {RNA815_32019} | |
4. | MligTC455_20905 | 22 | 0.45 | Mlig455_012469 | Neo: - |
BCAT2 | 0.973 | - | - | - | - | - | 0.973 | Mlig455_012469 {REF} {Length: 1481} {TRANSSPLICED} {Human: ENSG00000105552, BCAT2, branched chain amino acid transaminase 2, [Score=245, Expect=8e-78]; ENSG00000060982, BCAT1, branched chain amino acid transaminase 1, [Score=236, Expect=2e-74]} {Mouse: ENSMUSG00000030826, Bcat2, branched chain aminotransferase 2, mitochondrial, [Score=240, Expect=5e-76]; ENSMUSG00000030268, Bcat1, branched chain aminotransferase 1, cytosolic, [Score=239, Expect=6e-75]} {Dmel: FBgn0030482, CG1673, [Score=251, Expect=9e-80]} {Celegans: WBGene00001149, bcat-1, Branched-chain-amino-acid aminotransferase, cytosolic, [Score=215, Expect=2e-66]} {Smed: dd_Smed_v6_3721_0_1, dd_Smed_v6_3721_0_1, [Score=242, Expect=3e-77]} {RNA1509_43282} {RNA1310_2318.1} {RNA815_3748.1} |
5. | MligTC455_00387 | 32 | 0.66 | Mlig455_025051, Mlig455_025067 | Neo: - Age: - |
0.969 | - | - | - | - | - | 0.969 | Mlig455_025051 {REF} {Length: 625} {NoTransDecoderORF} Mlig455_025067 {REF} {Length: 1006} |
|
6. | MligTC455_02586 | 18 | 0.38 | Mlig455_027317 | Neo: - |
0.966 | - | - | - | - | - | 0.966 | Mlig455_027317 {REF} {Length: 1429} {TRANSSPLICED} {RNA1509_15660} {RNA1310_28914} {RNA815_2791.1} | |
7. | MligTC455_04227 | 22 | 0.45 | Mlig455_061453 | Neo: - Age: - |
0.966 | - | - | - | - | - | 0.966 | Mlig455_061453 {REF} {Length: 2038} {Pfam: Glycine rich protein [PF12810.9, score=24.7]} {RNA1509_28715} {RNA1310_109445} | |
8. | MligTC455_37838 | 40 | 0.83 | Mlig455_012885 | Neo: - Age: Up-Down-Down |
PKDREJ | 0.963 | - | - | - | - | - | 0.963 | Mlig455_012885 {REF} {Length: 13341} {Pfam: Polycystin cation channel [PF08016.14, score=221.2]; REJ domain [PF02010.17, score=52.8]; PLAT/LH2 domain [PF01477.25, score=27.5]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=184, Expect=7e-46]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [Score=186, Expect=7e-47]; ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=178, Expect=3e-44]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=110, Expect=6e-24]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=121, Expect=3e-27]} {Smed: dd_Smed_v6_15525_0_2, dd_Smed_v6_15525_0_2, [Score=260, Expect=1e-69]} {RNA1509_38015} {RNA1310_23208, RNA1509_38015} {RNA1509_38015, RNA815_31966} |
9. | MligTC455_08898 | 44 | 0.91 | Mlig455_023398, Mlig455_045568 | Neo: - Age: - |
PRR9 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_023398 {REF} {Length: 1264} {Pfam: Cryptococcal mannosyltransferase 1 [PF11735.10, score=27.2]} {RNA1509_37639} {RNA1310_23440} {RNA815_10032} Mlig455_045568 {REF} {Length: 8230} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=2e-06]} {RNA1509_37639} {RNA1310_23440, RNA1509_37639} {RNA1509_37639, RNA815_10032} |
10. | MligTC455_56336 | 20 | 0.42 | Mlig455_005736 | Neo: - Age: - Regeneration-enriched R3: 8.275 |
0.962 | - | - | - | - | - | 0.962 | Mlig455_005736 {REF} {Length: 510} {NoTransDecoderORF} {RNA1310_85720} | |
11. | MligTC455_46098 | 66 | 1.37 | Mlig455_058029, Mlig455_058164, Mlig455_058220 | Neo: - Age: - |
LIN28B | 0.96 | - | - | - | - | - | 0.960 | Mlig455_058029 {REF} {Length: 2395} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=79.9]; Zinc knuckle [PF00098.25, score=35.9]} {Human: ENSG00000187772, LIN28B, lin-28 homolog B, [RH, Score=130, Expect=1e-35]; ENSG00000131914, LIN28A, lin-28 homolog A, [RH, Score=127, Expect=4e-35]} {Mouse: ENSMUSG00000050966, Lin28a, lin-28 homolog A (C. elegans), [RH, Score=127, Expect=2e-35]} {Dmel: FBgn0035626, lin-28, [RH, Score=150, Expect=7e-45]} {Celegans: WBGene00003014, lin-28, [RH, Score=115, Expect=3e-31]} {Smed: dd_Smed_v6_17304_0_1, dd_Smed_v6_17304_0_1, [RH, Score=192, Expect=1e-61]} Mlig455_058164 {REF} {Length: 2624} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=80.2]; Zinc knuckle [PF00098.25, score=36.4]} {Human: ENSG00000187772, LIN28B, lin-28 homolog B, [RH, Score=130, Expect=3e-36]; ENSG00000131914, LIN28A, lin-28 homolog A, [RH, Score=127, Expect=1e-35]} {Mouse: ENSMUSG00000050966, Lin28a, lin-28 homolog A (C. elegans), [RH, Score=128, Expect=5e-36]} {Dmel: FBgn0035626, lin-28, [RH, Score=151, Expect=2e-45]} {Celegans: WBGene00003014, lin-28, [RH, Score=115, Expect=4e-31]} {Smed: dd_Smed_v6_17304_0_1, dd_Smed_v6_17304_0_1, [RH, Score=193, Expect=2e-62]} Mlig455_058220 {REF} {Length: 2982} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=80.1]; Zinc knuckle [PF00098.25, score=36.3]} {Human: ENSG00000187772, LIN28B, lin-28 homolog B, [RH, Score=130, Expect=1e-36]; ENSG00000131914, LIN28A, lin-28 homolog A, [RH, Score=127, Expect=1e-35]} {Mouse: ENSMUSG00000050966, Lin28a, lin-28 homolog A (C. elegans), [RH, Score=127, Expect=8e-36]} {Dmel: FBgn0035626, lin-28, [RH, Score=150, Expect=4e-45]} {Celegans: WBGene00003014, lin-28, [RH, Score=115, Expect=5e-31]} {Smed: dd_Smed_v6_17304_0_1, dd_Smed_v6_17304_0_1, [RH, Score=192, Expect=4e-62]} |
12. | MligTC455_13251 | 89 | 1.86 | Mlig455_005191 | Neo: - Age: logFC(26M/2M)=-0.503 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_005191 {REF} {Length: 651} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=36.6]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=41.2, Expect=9e-06]} {RNA1509_40279} {RNA1310_35227} {RNA815_50075} | |
13. | MligTC455_31875 | 62 | 1.3 | Mlig455_036547, Mlig455_057803, Mlig455_070413 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_036547 {REF} {Length: 312} {RNA1509_6194} {RNA1310_1675.2} {RNA815_2266} Mlig455_057803 {REF} {Length: 312} {RNA1509_6194} {RNA1310_1675.2} {RNA815_2266} Mlig455_070413 {REF} {Length: 4095} {RNA1509_6194} {RNA1310_1675.1} {RNA815_2266} |
|
14. | MligTC455_52494 | 100 | 2.08 | Mlig455_013751 | Neo: - Age: - Region-enriched R6: 6.660/0.00069 |
BEST4 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_013751 {REF} {Length: 1713} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=176.9]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=187, Expect=2e-53]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=181, Expect=2e-50]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=198, Expect=6e-56]} {Celegans: WBGene00022797, best-24, Bestrophin homolog 24, [Score=168, Expect=1e-45]} {Smed: dd_Smed_v6_22175_0_4, dd_Smed_v6_22175_0_4, [Score=295, Expect=7e-95]} {RNA1310_16906} {RNA815_14720} |
15. | MligTC455_40859 | 58 | 1.2 | Mlig455_009533 | Neo: - Age: - |
TRIOBP | 0.958 | - | - | - | - | - | 0.958 | Mlig455_009533 {REF} {Length: 2328} {Human: ENSG00000100106, TRIOBP, TRIO and F-actin binding protein, [Score=58.2, Expect=8e-09]} |
16. | MligTC455_00307 | 21 | 0.44 | Mlig455_065049 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_065049 {REF} {Length: 527} {NoTransDecoderORF} {RNA1509_18025} {RNA1310_50423.1} {RNA815_44681} | |
17. | MligTC455_07851 | 152 | 3.16 | Mlig455_000950 | Neo: - Age: - Region-enriched R4: 5.566/0.00142 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_000950 {REF} {Length: 404} {NoTransDecoderORF} | |
18. | MligTC455_24975 | 33 | 0.7 | Mlig455_001679 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_001679 {REF} {Length: 1106} {NoTransDecoderORF} {RNA1310_79875} | |
19. | MligTC455_50100 | 86 | 1.8 | Mlig455_031032 | Neo: - Age: - Region-enriched R8: 4.201/0.00579 |
SLC4A11 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_031032 {REF} {Length: 3497} {Pfam: HCO3- transporter family [PF00955.23, score=526.7]; Band 3 cytoplasmic domain [PF07565.15, score=23.8]; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 [PF00359.24, score=22.0]} {Human: ENSG00000088836, SLC4A11, solute carrier family 4 member 11, [RH, Score=547, Expect=3e-180]} {Mouse: ENSMUSG00000074796, Slc4a11, solute carrier family 4, sodium bicarbonate transporter-like, member 11, [RH, Score=533, Expect=2e-175]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [Score=242, Expect=3e-66]} {Celegans: WBGene00019018, abts-3, Anion transporter ABTS-3; Anion/Bicarbonate TranSporter family, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_16577_0_1, dd_Smed_v6_16577_0_1, [RH, Score=904, Expect=0.0]} {RNA1509_55902} {RNA1310_18543} {RNA815_14015} |
20. | MligTC455_10907 | 39 | 0.81 | Mlig455_030325 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_030325 {REF} {Length: 1588} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=21.2]} {RNA1310_27913} {RNA815_25050} | |
21. | MligTC455_12958 | 55 | 1.15 | Mlig455_055683 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_055683 {REF} {Length: 1376} | |
22. | MligTC455_27591 | 24 | 0.5 | Mlig455_021100 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_021100 {REF} {Length: 1478} {RNA1509_46103} {RNA1310_81900} {RNA815_8813.1} | |
23. | MligTC455_31116 | 27 | 0.55 | Mlig455_057067 | Neo: - Age: - |
ADAM9 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_057067 {REF} {Length: 7999} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=123.8]; ADAM cysteine-rich [PF08516.14, score=69.0]; Disintegrin [PF00200.25, score=67.1]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=39.7]} {Human: ENSG00000168615, ADAM9, ADAM metallopeptidase domain 9, [Score=247, Expect=2e-67]} {Mouse: ENSMUSG00000014725, Adam28, a disintegrin and metallopeptidase domain 28, [Score=252, Expect=1e-69]; ENSMUSG00000031555, Adam9, a disintegrin and metallopeptidase domain 9 (meltrin gamma), [Score=248, Expect=1e-67]} {Dmel: FBgn0265140, Meltrin, [Score=281, Expect=3e-76]} {Celegans: WBGene00000074, adm-2, ADAM (Disintegrin plus metalloprotease) family, [Score=248, Expect=2e-67]} {Smed: dd_Smed_v6_5143_0_1, dd_Smed_v6_5143_0_1, [Score=212, Expect=1e-55]} {RNA1509_44914} {RNA1310_9319.1} {RNA815_4173.1} |
24. | MligTC455_26999 | 330 | 6.88 | Mlig455_037719, Mlig455_037789 | Neo: - Age: - |
RBM12B | 0.952 | - | - | - | - | - | 0.952 | Mlig455_037719 {REF} {Length: 3624} {Pfam: Mitochondrial distribution and morphology protein 10 [PF12519.10, score=19.6]} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=58.9, Expect=4e-08]} {RNA1509_40809} {RNA1310_8203} {RNA815_13132} Mlig455_037789 {REF} {Length: 3262} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=61.2, Expect=7e-09]} {RNA1310_8203} {RNA815_13132} |
25. | MligTC455_53855 | 93 | 1.94 | Mlig455_024409 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_024409 {REF} {Length: 2360} {Pfam: Major Facilitator Superfamily [PF07690.18, score=48.7]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.8]} {Smed: dd_Smed_v6_8794_0_1, dd_Smed_v6_8794_0_1, [Score=76.3, Expect=1e-14]} {RNA1509_25506, RNA1509_46988} {RNA1310_4968.1, RNA1509_25506} {RNA1509_25506, RNA815_15293} | |
26. | MligTC455_08367 | 22 | 0.45 | Mlig455_000673 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_000673 {REF} {Length: 899} {Pfam: WSC domain [PF01822.21, score=48.6]; PAN domain [PF00024.28, score=23.3]} {RNA1310_39474.2} {RNA815_33128} | |
27. | MligTC455_38010 | 38 | 0.79 | Mlig455_059485 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_059485 {REF} {Length: 1213} {Pfam: Lectin C-type domain [PF00059.23, score=24.8]} {RNA1509_20946} {RNA1310_35102} {RNA815_16139} | |
28. | MligTC455_40365 | 195 | 4.05 | Mlig455_038370 | Neo: - Age: Down-Up-Down Region-enriched R2: 3.989/0.00156 |
0.95 | - | - | - | - | - | 0.950 | Mlig455_038370 {REF} {Length: 3062} {RNA1509_57598} {RNA1310_48414, RNA1509_57598} {RNA1509_57598, RNA815_41099} | |
29. | MligTC455_41882 | 38 | 0.79 | Mlig455_068617 | Neo: - Age: Down-Up-Down |
FGFR1OP | 0.95 | - | - | - | - | - | 0.950 | Mlig455_068617 {REF} {Length: 3810} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=38.7]; LisH [PF16045.7, score=17.7]} {Human: ENSG00000213066, FGFR1OP, FGFR1 oncogene partner, [RH, Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000069135, Fgfr1op, Fgfr1 oncogene partner, [RH, Score=97.4, Expect=1e-21]} {Smed: dd_Smed_v6_5371_0_1, dd_Smed_v6_5371_0_1, [Score=57.4, Expect=5e-09]} {RNA1509_14615} {RNA1310_14786} {RNA815_10750} |