Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_20906 | 1101 | 22.94 | Mlig455_012468 | Neo: - Age: - Region-enriched R5: 1.237/0.00004 |
Mlig455_012468 {REF} {Length: 311} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19896} {RNA1310_2318.1} {RNA815_9926} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -1.286 | 4.828 | 0.12936 | 0.72694 | |
RegionR2 | 0.238 | 4.828 | 0.52248 | 0.89628 | |
RegionR3 | -0.336 | 4.828 | 0.29409 | 0.83631 | |
RegionR4 | 0.886 | 4.828 | 0.00542 | 0.03867 | |
RegionR5 | 1.237 | 4.828 | 0.00000 | 0.00004 | |
RegionR6 | -0.1 | 4.828 | 0.75670 | 1.00000 | |
RegionR7 | 0.081 | 4.828 | 0.82910 | 1.00000 | |
RegionR8 | -0.721 | 4.828 | 0.16266 | 0.73016 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -2.826 | 4.828 | 0.16379 | 0.90551 | |
RegenerationR2 | 0.142 | 4.828 | 0.63141 | 0.92766 | |
RegenerationR3 | -0.025 | 4.828 | 0.94183 | 1.00000 | |
RegenerationR4 | -1.092 | 4.828 | 0.00093 | 0.03320 | |
RegenerationR5 | -0.247 | 4.828 | 0.38262 | 0.78818 | |
RegenerationR6 | -0.155 | 4.828 | 0.66040 | 0.90369 | |
RegenerationBL | 0.31 | 4.828 | 0.43736 | 0.80507 | |
RegenerationTP | -0.424 | 4.828 | 0.38495 | 0.81905 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_20906 | 1101 | 22.94 | Mlig455_012468 | Neo: - Age: - Region-enriched R5: 1.237/0.00004 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012468 {REF} {Length: 311} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19896} {RNA1310_2318.1} {RNA815_9926} | |
2. | MligTC455_20907 | 3041 | 63.35 | Mlig455_012486, Mlig455_012578 | Neo: Irradiation Age: logFC(26M/2M)=0.285 Region-enriched R5: 1.149/0.00019 |
BCAT2 | 4.439 | 0.932 | 0.967 | 0.848 | 0.820 | 0.872 | - | Mlig455_012486 {REF} {Length: 3875} {TRANSSPLICED} {Pfam: Amino-transferase class IV [PF01063.21, score=99.3]} {Human: ENSG00000105552, BCAT2, branched chain amino acid transaminase 2, [Score=375, Expect=3e-128]; ENSG00000060982, BCAT1, branched chain amino acid transaminase 1, [Score=360, Expect=1e-122]} {Mouse: ENSMUSG00000030826, Bcat2, branched chain aminotransferase 2, mitochondrial, [Score=372, Expect=3e-127]; ENSMUSG00000030268, Bcat1, branched chain aminotransferase 1, cytosolic, [Score=362, Expect=1e-122]} {Dmel: FBgn0030482, CG1673, [Score=368, Expect=3e-125]} {Celegans: WBGene00001149, bcat-1, Branched-chain-amino-acid aminotransferase, cytosolic, [Score=353, Expect=8e-120]} {Smed: dd_Smed_v6_3721_0_1, dd_Smed_v6_3721_0_1, [Score=374, Expect=1e-128]} {RNA1509_13368, RNA1509_15302, RNA1509_9563} {RNA1310_2318.1, RNA1509_13368, RNA1509_15302} {RNA1509_13368, RNA1509_15302, RNA815_3748.1} Mlig455_012578 {REF} {Length: 3855} {TRANSSPLICED} {Pfam: Amino-transferase class IV [PF01063.21, score=100.6]} {Human: ENSG00000105552, BCAT2, branched chain amino acid transaminase 2, [RH, Score=408, Expect=1e-140]; ENSG00000060982, BCAT1, branched chain amino acid transaminase 1, [RH, Score=397, Expect=2e-136]} {Mouse: ENSMUSG00000030826, Bcat2, branched chain aminotransferase 2, mitochondrial, [RH, Score=404, Expect=3e-139]; ENSMUSG00000030268, Bcat1, branched chain aminotransferase 1, cytosolic, [RH, Score=399, Expect=2e-136]} {Dmel: FBgn0030482, CG1673, [RH, Score=414, Expect=2e-142]} {Celegans: WBGene00001149, bcat-1, Branched-chain-amino-acid aminotransferase, cytosolic, [RH, Score=386, Expect=4e-132]} {Smed: dd_Smed_v6_3721_0_1, dd_Smed_v6_3721_0_1, [RH, Score=425, Expect=4e-148]} {RNA1509_19896, RNA1509_22259, RNA1509_31301, RNA1509_43282, RNA1509_9563} {RNA1310_2318.1, RNA1509_19896, RNA1509_22259, RNA1509_31301, RNA1509_43282, RNA1509_9563} {RNA1509_19896, RNA1509_22259, RNA1509_31301, RNA1509_43282, RNA1509_9563, RNA815_3748.1} |
3. | MligTC455_25153 | 368 | 7.66 | Mlig455_040073 | Neo: - Age: - Region-enriched R5: 3.037/0.00000 |
1.85 | 0.873 | - | - | - | - | 0.977 | Mlig455_040073 {REF} {Length: 2051} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=38.7]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=20.1]} {Smed: dd_Smed_v6_2982_0_2, dd_Smed_v6_2982_0_2, [Score=83.2, Expect=5e-18]} {RNA1509_20770} {RNA1310_16534} {RNA815_6249} | |
4. | MligTC455_50040 | 958 | 19.95 | Mlig455_043732, Mlig455_043823, Mlig455_047426 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.579 Region-enriched R5: 1.551/0.00096 |
1.744 | - | - | 0.789 | - | - | 0.955 | Mlig455_043732 {REF} {Length: 721} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22418} {RNA1310_14285.1} {RNA815_20145} Mlig455_043823 {REF} {Length: 685} {TRANSSPLICED} {RNA1509_56602} {RNA1310_14285.1} {RNA815_20145} Mlig455_047426 {REF} {Length: 685} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22418, RNA1509_54575, RNA1509_56602} {RNA1310_14285.1, RNA1509_22418, RNA1509_54575, RNA1509_56602} {RNA1509_22418, RNA1509_54575, RNA1509_56602, RNA815_20145} |
|
5. | MligTC455_44183 | 1174 | 24.46 | Mlig455_002172, Mlig455_002271, Mlig455_002316 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.194 Region-specific R5: 2.838 Region-enriched R5: 2.858/0.00000 |
ERI1 | 1.684 | - | - | 0.727 | - | - | 0.957 | Mlig455_002172 {REF} {Length: 1279} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=28.7]} {Human: ENSG00000104626, ERI1, exoribonuclease 1, [Score=107, Expect=1e-26]} {Mouse: ENSMUSG00000031527, Eri1, exoribonuclease 1, [Score=104, Expect=1e-25]} {Dmel: FBgn0265192, Snp, Snipper, [Score=58.2, Expect=6e-10]} {Smed: dd_Smed_v6_9578_0_1, dd_Smed_v6_9578_0_1, [Score=129, Expect=6e-35]} {RNA1509_35822} {RNA1310_20768} {RNA815_8821} Mlig455_002271 {REF} {Length: 1481} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=92.5]} {Human: ENSG00000104626, ERI1, exoribonuclease 1, [RH, Score=200, Expect=2e-61]} {Mouse: ENSMUSG00000031527, Eri1, exoribonuclease 1, [RH, Score=196, Expect=4e-60]} {Dmel: FBgn0265192, Snp, Snipper, [RH, Score=127, Expect=2e-34]} {Celegans: WBGene00001332, eri-1, 3'-5' exonuclease eri-1, [RH, Score=155, Expect=1e-43]} {Smed: dd_Smed_v6_9578_0_1, dd_Smed_v6_9578_0_1, [RH, Score=222, Expect=8e-70]} {RNA1509_35822, RNA1509_9924} {RNA1310_20768, RNA1509_35822, RNA1509_9924} {RNA1509_35822, RNA1509_9924, RNA815_8821} Mlig455_002316 {REF} {Length: 1481} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=92.5]} {Human: ENSG00000104626, ERI1, exoribonuclease 1, [RH, Score=199, Expect=6e-61]} {Mouse: ENSMUSG00000031527, Eri1, exoribonuclease 1, [RH, Score=196, Expect=8e-60]} {Dmel: FBgn0265192, Snp, Snipper, [RH, Score=127, Expect=2e-34]} {Celegans: WBGene00001332, eri-1, 3'-5' exonuclease eri-1, [RH, Score=156, Expect=6e-43]} {Smed: dd_Smed_v6_9578_0_1, dd_Smed_v6_9578_0_1, [RH, Score=221, Expect=2e-69]} {RNA1509_22363, RNA1509_9924} {RNA1310_20768, RNA1509_22363} {RNA1509_22363, RNA815_8821} |
6. | MligTC455_49320 | 971 | 20.23 | Mlig455_019078, Mlig455_064290 | Neo: Irradiation Age: - Region-enriched R5: 1.946/0.00002 |
1.666 | 0.713 | - | - | - | - | 0.953 | Mlig455_019078 {REF} {Length: 3238} {Mouse: ENSMUSG00000040033, Stat2, signal transducer and activator of transcription 2, [Score=50.1, Expect=8e-06]} {Smed: dd_Smed_v6_2170_0_1, dd_Smed_v6_2170_0_1, [RH, Score=197, Expect=2e-55]} {RNA1509_14513} {RNA1310_10976.1, RNA1509_14513} {RNA1509_14513, RNA815_24594} Mlig455_064290 {REF} {Length: 2997} {Smed: dd_Smed_v6_2170_0_1, dd_Smed_v6_2170_0_1, [RH, Score=197, Expect=2e-55]} {RNA1509_14513, RNA1509_46345} {RNA1310_10976.1, RNA1509_46345} {RNA1509_46345, RNA815_24594} |
|
7. | MligTC455_38924 | 425 | 8.86 | Mlig455_023099 | Neo: - Age: - Region-enriched R5: 1.465/0.01471 |
IPPK | 0.963 | - | - | - | - | - | 0.963 | Mlig455_023099 {REF} {Length: 3339} {TRANSSPLICED} {Pfam: Inositol-pentakisphosphate 2-kinase [PF06090.14, score=228.8]} {Human: ENSG00000127080, IPPK, inositol-pentakisphosphate 2-kinase, [RH, Score=145, Expect=6e-37]} {Mouse: ENSMUSG00000021385, Ippk, inositol 1,3,4,5,6-pentakisphosphate 2-kinase, [RH, Score=147, Expect=6e-38]} {Dmel: FBgn0050295, Ipk1, [RH, Score=70.1, Expect=3e-12]} {Celegans: WBGene00012466, ippk-1, Inositol 1,3,4,5,6-PentakisPhosphate 2-Kinase homolog, [RH, Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_7143_0_2, dd_Smed_v6_7143_0_2, [RH, Score=114, Expect=5e-27]} {RNA1509_11545} {RNA1310_13930, RNA1509_11545} {RNA1509_11545, RNA815_4764.1} |
8. | MligTC455_23854 | 1346 | 28.04 | Mlig455_047009, Mlig455_047049 | Neo: Neoblast, stringent Age: - Regeneration-upregulated BL: 2.711 Regeneration-enriched BL: 2.711 |
SMARCA1, SMARCA5 | 0.961 | 0.961 | - | - | - | - | - | Mlig455_047009 {REF} {Length: 4747} {Pfam: SNF2-related domain [PF00176.25, score=175.5]; SLIDE [PF09111.12, score=142.3]; HAND [PF09110.13, score=92.2]; Helicase conserved C-terminal domain [PF00271.33, score=78.5]; Myb-like DNA-binding domain [PF00249.33, score=32.0]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.7]} {Human: ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1078, Expect=0.0]; ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1074, Expect=0.0]} {Mouse: ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1088, Expect=0.0]; ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1078, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [Score=1056, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [Score=985, Expect=0.0]} {Smed: dd_Smed_v6_3473_0_1, dd_Smed_v6_3473_0_1, [Score=1015, Expect=0.0]} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1310_4518.1, RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597, RNA815_683.1} Mlig455_047049 {REF} {Length: 3986} {Pfam: SNF2-related domain [PF00176.25, score=279.7]; SLIDE [PF09111.12, score=124.2]; HAND [PF09110.13, score=91.8]; Helicase conserved C-terminal domain [PF00271.33, score=77.7]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; DEAD/DEAH box helicase [PF00270.31, score=28.9]; Myb-like DNA-binding domain [PF00249.33, score=24.3]; DNA-binding domain [PF13892.8, score=22.1]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.1]} {Human: ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1291, Expect=0.0]; ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1268, Expect=0.0]} {Mouse: ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1292, Expect=0.0]; ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1274, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [RH, Score=1256, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [RH, Score=1149, Expect=0.0]} {Smed: dd_Smed_v6_3355_0_1, dd_Smed_v6_3355_0_1, [RH, Score=1175, Expect=0.0]} {RNA1509_2044} {RNA1310_4518.1} {RNA815_683.1} |
9. | MligTC455_21047 | 658 | 13.71 | Mlig455_029155 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.540/0.00071 |
TMEM41B | 0.956 | - | - | - | - | - | 0.956 | Mlig455_029155 {REF} {Length: 4968} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF758) [PF05527.13, score=161.1]; SNARE associated Golgi protein [PF09335.13, score=61.1]; Tetratricopeptide repeat [PF00515.30, score=52.5]; Tetratricopeptide repeat [PF07719.19, score=50.4]; TPR repeat [PF13414.8, score=48.9]; Potential Monad-binding region of RPAP3 [PF13877.8, score=39.9]; Tetratricopeptide repeat [PF13181.8, score=36.7]; Tetratricopeptide repeat [PF13371.8, score=29.5]; Tetratricopeptide repeat [PF13432.8, score=24.7]; Tetratricopeptide repeat [PF13428.8, score=23.1]} {Human: ENSG00000166471, TMEM41B, transmembrane protein 41B, [Score=247, Expect=3e-74]} {Mouse: ENSMUSG00000047554, Tmem41b, transmembrane protein 41B, [Score=254, Expect=3e-77]} {Dmel: FBgn0030850, stas, Stasimon, [Score=212, Expect=2e-61]} {Celegans: WBGene00006520, tag-175, Transmembrane protein 41 homolog, [Score=209, Expect=1e-61]} {Smed: dd_Smed_v6_9137_0_1, dd_Smed_v6_9137_0_1, [RH, Score=151, Expect=3e-39]} {RNA1509_27663} {RNA1310_19235} {RNA815_13394} |
10. | MligTC455_24331 | 1038 | 21.62 | Mlig455_040061, Mlig455_040088 | Neo: - Age: - |
PPFIA1, PPFIA2 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_040061 {REF} {Length: 7514} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=71.6]; SAM domain (Sterile alpha motif) [PF07647.19, score=43.5]} {Human: ENSG00000139220, PPFIA2, PTPRF interacting protein alpha 2, [Score=360, Expect=6e-104]; ENSG00000131626, PPFIA1, PTPRF interacting protein alpha 1, [Score=350, Expect=7e-101]} {Mouse: ENSMUSG00000026458, Ppfia4, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4, [Score=351, Expect=2e-101]; ENSMUSG00000053825, Ppfia2, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2, [Score=349, Expect=4e-100]; ENSMUSG00000037519, Ppfia1, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1, [Score=343, Expect=3e-98]} {Dmel: FBgn0046704, Liprin-alpha, [Score=377, Expect=1e-110]} {Celegans: WBGene00006364, syd-2, Liprin-alpha, [Score=355, Expect=4e-103]} {Smed: dd_Smed_v6_5468_0_2, dd_Smed_v6_5468_0_2, [Score=370, Expect=7e-107]} {RNA1509_9552} {RNA1310_17995} {RNA815_6055} Mlig455_040088 {REF} {Length: 7747} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=67.1]; SAM domain (Sterile alpha motif) [PF07647.19, score=33.7]} {Human: ENSG00000131626, PPFIA1, PTPRF interacting protein alpha 1, [Score=277, Expect=1e-76]; ENSG00000139220, PPFIA2, PTPRF interacting protein alpha 2, [Score=275, Expect=5e-78]} {Mouse: ENSMUSG00000037519, Ppfia1, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1, [Score=270, Expect=4e-74]; ENSMUSG00000053825, Ppfia2, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2, [Score=267, Expect=6e-73]; ENSMUSG00000026458, Ppfia4, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4, [Score=262, Expect=5e-73]; ENSMUSG00000003863, Ppfia3, protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3, [Score=258, Expect=7e-71]} {Dmel: FBgn0046704, Liprin-alpha, [Score=273, Expect=3e-75]} {Celegans: WBGene00006364, syd-2, Liprin-alpha, [Score=291, Expect=7e-82]} {Smed: dd_Smed_v6_5468_0_2, dd_Smed_v6_5468_0_2, [Score=317, Expect=1e-89]} {RNA1509_9552} {RNA1310_15332} {RNA815_6055} |
11. | MligTC455_16140 | 1639 | 34.14 | Mlig455_019088 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=0.807 Region-enriched R5: 1.616/0.00000 |
HPDL | 0.954 | - | - | - | - | - | 0.954 | Mlig455_019088 {REF} {Length: 1637} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=26.6]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=23.9]} {Human: ENSG00000186603, HPDL, 4-hydroxyphenylpyruvate dioxygenase like, [RH, Score=117, Expect=6e-29]} {Mouse: ENSMUSG00000043155, Hpdl, 4-hydroxyphenylpyruvate dioxygenase-like, [RH, Score=124, Expect=6e-32]} {Dmel: FBgn0036992, CG11796, [Score=102, Expect=2e-24]} {Celegans: WBGene00016294, C31H2.4, Putative protein C31H2.4, [Score=104, Expect=6e-25]} {Smed: dd_Smed_v6_13579_0_1, dd_Smed_v6_13579_0_1, [RH, Score=167, Expect=6e-48]} {RNA1509_3068} {RNA1310_18738, RNA1509_3068} {RNA1509_3068, RNA815_12614} |
12. | MligTC455_16141 | 1644 | 34.25 | Mlig455_064276 | Neo: Irradiation Age: Down-Down-Up Region-enriched R5: 1.589/0.00000 |
HPDL | 0.95 | - | - | - | - | - | 0.950 | Mlig455_064276 {REF} {Length: 1629} {TRANSSPLICED} {Pfam: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=26.5]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF13669.8, score=23.0]} {Human: ENSG00000186603, HPDL, 4-hydroxyphenylpyruvate dioxygenase like, [RH, Score=120, Expect=5e-30]} {Mouse: ENSMUSG00000043155, Hpdl, 4-hydroxyphenylpyruvate dioxygenase-like, [RH, Score=127, Expect=1e-32]} {Dmel: FBgn0036992, CG11796, [Score=103, Expect=7e-25]} {Celegans: WBGene00016294, C31H2.4, Putative protein C31H2.4, [Score=103, Expect=2e-24]} {Smed: dd_Smed_v6_13579_0_1, dd_Smed_v6_13579_0_1, [RH, Score=166, Expect=1e-47]} {RNA1509_3068} {RNA1310_18738} {RNA815_12614} |