Data search
Results for MligTC455_23854
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23854 | 1346 | 28.04 | Mlig455_047009, Mlig455_047049 | Neo: Neoblast, stringent Age: - Regeneration-upregulated BL: 2.711 Regeneration-enriched BL: 2.711 |
SMARCA1, SMARCA5 | Mlig455_047009 {REF} {Length: 4747} {Pfam: SNF2-related domain [PF00176.25, score=175.5]; SLIDE [PF09111.12, score=142.3]; HAND [PF09110.13, score=92.2]; Helicase conserved C-terminal domain [PF00271.33, score=78.5]; Myb-like DNA-binding domain [PF00249.33, score=32.0]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.7]} {Human: ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1078, Expect=0.0]; ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1074, Expect=0.0]} {Mouse: ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1088, Expect=0.0]; ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1078, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [Score=1056, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [Score=985, Expect=0.0]} {Smed: dd_Smed_v6_3473_0_1, dd_Smed_v6_3473_0_1, [Score=1015, Expect=0.0]} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1310_4518.1, RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597, RNA815_683.1} Mlig455_047049 {REF} {Length: 3986} {Pfam: SNF2-related domain [PF00176.25, score=279.7]; SLIDE [PF09111.12, score=124.2]; HAND [PF09110.13, score=91.8]; Helicase conserved C-terminal domain [PF00271.33, score=77.7]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; DEAD/DEAH box helicase [PF00270.31, score=28.9]; Myb-like DNA-binding domain [PF00249.33, score=24.3]; DNA-binding domain [PF13892.8, score=22.1]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.1]} {Human: ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1291, Expect=0.0]; ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1268, Expect=0.0]} {Mouse: ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1292, Expect=0.0]; ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1274, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [RH, Score=1256, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [RH, Score=1149, Expect=0.0]} {Smed: dd_Smed_v6_3355_0_1, dd_Smed_v6_3355_0_1, [RH, Score=1175, Expect=0.0]} {RNA1509_2044} {RNA1310_4518.1} {RNA815_683.1} |
Cumulative graph for MligTC455_23854
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.663 | 4.885 | 0.55261 | 1.00000 | |
| RegionR2 | 0.591 | 4.885 | 0.32814 | 0.72018 | |
| RegionR3 | 0.279 | 4.885 | 0.57720 | 1.00000 | |
| RegionR4 | 0.632 | 4.885 | 0.24544 | 0.54384 | |
| RegionR5 | 1.131 | 4.885 | 0.00925 | 0.05459 | |
| RegionR6 | 0.272 | 4.885 | 0.57989 | 1.00000 | |
| RegionR7 | -0.977 | 4.885 | 0.13448 | 0.68959 | |
| RegionR8 | -1.264 | 4.885 | 0.11010 | 0.61655 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.243 | 4.885 | 0.33293 | 1.00000 | |
| RegenerationR2 | 0.729 | 4.885 | 0.17595 | 0.61650 | |
| RegenerationR3 | 1.225 | 4.885 | 0.03680 | 0.33931 | |
| RegenerationR4 | 0.865 | 4.885 | 0.14691 | 0.57320 | |
| RegenerationR5 | 0.868 | 4.885 | 0.11341 | 0.50772 | |
| RegenerationR6 | 1.686 | 4.885 | 0.00366 | 0.07197 | |
| RegenerationBL | 2.711 | 4.885 | 0.00000 | 0.00007 | Specific for BL: 2.711 |
| RegenerationTP | 2.126 | 4.885 | 0.00133 | 0.05624 |
Genes with expression patterns similar to MligTC455_23854
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23854 | 1346 | 28.04 | Mlig455_047009, Mlig455_047049 | Neo: Neoblast, stringent Age: - Regeneration-upregulated BL: 2.711 Regeneration-enriched BL: 2.711 |
SMARCA1, SMARCA5 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047009 {REF} {Length: 4747} {Pfam: SNF2-related domain [PF00176.25, score=175.5]; SLIDE [PF09111.12, score=142.3]; HAND [PF09110.13, score=92.2]; Helicase conserved C-terminal domain [PF00271.33, score=78.5]; Myb-like DNA-binding domain [PF00249.33, score=32.0]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.7]} {Human: ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1078, Expect=0.0]; ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1074, Expect=0.0]} {Mouse: ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1088, Expect=0.0]; ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1078, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [Score=1056, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [Score=985, Expect=0.0]} {Smed: dd_Smed_v6_3473_0_1, dd_Smed_v6_3473_0_1, [Score=1015, Expect=0.0]} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1310_4518.1, RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597, RNA815_683.1} Mlig455_047049 {REF} {Length: 3986} {Pfam: SNF2-related domain [PF00176.25, score=279.7]; SLIDE [PF09111.12, score=124.2]; HAND [PF09110.13, score=91.8]; Helicase conserved C-terminal domain [PF00271.33, score=77.7]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; DEAD/DEAH box helicase [PF00270.31, score=28.9]; Myb-like DNA-binding domain [PF00249.33, score=24.3]; DNA-binding domain [PF13892.8, score=22.1]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.1]} {Human: ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1291, Expect=0.0]; ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1268, Expect=0.0]} {Mouse: ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1292, Expect=0.0]; ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1274, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [RH, Score=1256, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [RH, Score=1149, Expect=0.0]} {Smed: dd_Smed_v6_3355_0_1, dd_Smed_v6_3355_0_1, [RH, Score=1175, Expect=0.0]} {RNA1509_2044} {RNA1310_4518.1} {RNA815_683.1} |
| 2. | MligTC455_37797 | 1708 | 35.59 | Mlig455_052264, Mlig455_052350 | Neo: Neoblast, stringent Age: logFC(26M/2M)=-0.294 Regeneration-enriched BL: 1.878 |
LRWD1 | 1.757 | - | - | - | 0.950 | - | 0.807 | Mlig455_052264 {REF} {Length: 5281} {TRANSSPLICED} {Pfam: NAB conserved region 2 (NCD2) [PF04905.15, score=67.7]; Leucine rich repeat [PF13855.8, score=30.0]; WD domain, G-beta repeat [PF00400.34, score=24.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.5]} {Human: ENSG00000161036, LRWD1, leucine rich repeats and WD repeat domain containing 1, [RH, Score=206, Expect=3e-55]} {Mouse: ENSMUSG00000029703, Lrwd1, leucine-rich repeats and WD repeat domain containing 1, [RH, Score=211, Expect=6e-57]} {Dmel: FBgn0032391, escl, [Score=57.8, Expect=6e-08]} {Celegans: WBGene00003107, mab-10, [RH, Score=55.1, Expect=4e-07]} {Smed: dd_Smed_v6_2942_0_1, dd_Smed_v6_2942_0_1, [RH, Score=437, Expect=3e-127]} {RNA1509_1906} {RNA1310_947} {RNA815_870} Mlig455_052350 {REF} {Length: 5956} {TRANSSPLICED} {Pfam: NAB conserved region 2 (NCD2) [PF04905.15, score=67.8]; Leucine rich repeat [PF13855.8, score=30.0]; WD domain, G-beta repeat [PF00400.34, score=24.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.5]} {Human: ENSG00000161036, LRWD1, leucine rich repeats and WD repeat domain containing 1, [RH, Score=206, Expect=3e-55]} {Mouse: ENSMUSG00000029703, Lrwd1, leucine-rich repeats and WD repeat domain containing 1, [RH, Score=211, Expect=6e-57]} {Dmel: FBgn0032391, escl, [Score=57.8, Expect=6e-08]} {Celegans: WBGene00003107, mab-10, [RH, Score=55.1, Expect=4e-07]} {Smed: dd_Smed_v6_2942_0_1, dd_Smed_v6_2942_0_1, [RH, Score=437, Expect=3e-127]} {RNA1509_1906} {RNA1310_947, RNA1509_1906} {RNA1509_1906, RNA815_870} |
| 3. | MligTC455_41761 | 655 | 13.65 | Mlig455_020225 | Neo: Irradiation Age: - Region-enriched R5: 1.227/0.00118 |
PTPRZ1 | 1.662 | 0.952 | - | - | - | - | 0.710 | Mlig455_020225 {REF} {Length: 5464} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=409.3]; Fibronectin type III domain [PF00041.23, score=83.6]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=24.2]} {Human: ENSG00000106278, PTPRZ1, protein tyrosine phosphatase, receptor type Z1, [RH, Score=492, Expect=4e-149]; ENSG00000144724, PTPRG, protein tyrosine phosphatase, receptor type G, [RH, Score=492, Expect=4e-149]} {Mouse: ENSMUSG00000068748, Ptprz1, protein tyrosine phosphatase, receptor type Z, polypeptide 1, [RH, Score=491, Expect=6e-145]; ENSMUSG00000021745, Ptprg, protein tyrosine phosphatase, receptor type, G, [RH, Score=485, Expect=1e-146]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [RH, Score=469, Expect=9e-143]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=348, Expect=9e-101]} {Smed: dd_Smed_v6_6997_0_1, dd_Smed_v6_6997_0_1, [RH, Score=564, Expect=9e-177]} {RNA1509_4639} {RNA1310_810} {RNA815_3651} |
| 4. | MligTC455_04366 | 654 | 13.63 | Mlig455_052829 | Neo: - Age: - |
UPF2 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_052829 {REF} {Length: 4197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=172.7]; Up-frameshift suppressor 2 [PF04050.16, score=29.1]} {Human: ENSG00000151461, UPF2, UPF2, regulator of nonsense mediated mRNA decay, [Score=651, Expect=0.0]} {Mouse: ENSMUSG00000043241, Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), [Score=659, Expect=0.0]} {Dmel: FBgn0029992, Upf2, [Score=569, Expect=0.0]} {Celegans: WBGene00004881, smg-3, SMG-3; Suppressor with Morphological effect on Genitalia, [RH, Score=328, Expect=5e-94]} {Smed: dd_Smed_v6_7696_0_1, dd_Smed_v6_7696_0_1, [RH, Score=541, Expect=3e-172]} {RNA1509_10414} {RNA1310_2087} {RNA815_4700.1} |
| 5. | MligTC455_45787 | 956 | 19.91 | Mlig455_022003 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.079/0.00186 |
CPSF3 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_022003 {REF} {Length: 2393} {TRANSSPLICED} {Pfam: Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term [PF11718.10, score=141.0]; Beta-Casp domain [PF10996.10, score=109.1]; Metallo-beta-lactamase superfamily domain [PF16661.7, score=74.4]; Metallo-beta-lactamase superfamily [PF00753.29, score=73.5]; Zn-dependent metallo-hydrolase RNA specificity domain [PF07521.14, score=56.9]; Beta-lactamase superfamily domain [PF12706.9, score=45.5]; Beta-lactamase superfamily domain [PF13483.8, score=29.0]} {Human: ENSG00000119203, CPSF3, cleavage and polyadenylation specific factor 3, [RH, Score=845, Expect=0.0]} {Mouse: ENSMUSG00000054309, Cpsf3, cleavage and polyadenylation specificity factor 3, [RH, Score=848, Expect=0.0]} {Dmel: FBgn0261065, Cpsf73, Cleavage and polyadenylation specificity factor 73, [RH, Score=838, Expect=0.0]} {Celegans: WBGene00013460, cpsf-3, Cleavage and Polyadenylation Specificity Factor, [RH, Score=713, Expect=0.0]} {Smed: dd_Smed_v6_2005_0_1, dd_Smed_v6_2005_0_1, [RH, Score=951, Expect=0.0]} {RNA1509_5278} {RNA1310_8263, RNA1509_5278} {RNA1509_5278, RNA815_3205} |
| 6. | MligTC455_20906 | 1101 | 22.94 | Mlig455_012468 | Neo: - Age: - Region-enriched R5: 1.237/0.00004 |
0.961 | 0.961 | - | - | - | - | - | Mlig455_012468 {REF} {Length: 311} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_19896} {RNA1310_2318.1} {RNA815_9926} | |
| 7. | MligTC455_40788 | 442 | 9.2 | Mlig455_048951 | Neo: - Age: - |
SUZ12 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_048951 {REF} {Length: 2627} {TRANSSPLICED} {Pfam: VEFS-Box of polycomb protein [PF09733.11, score=116.0]} {Human: ENSG00000178691, SUZ12, SUZ12, polycomb repressive complex 2 subunit, [RH, Score=250, Expect=2e-72]} {Mouse: ENSMUSG00000017548, Suz12, SUZ12 polycomb repressive complex 2 subunit, [RH, Score=253, Expect=1e-73]} {Dmel: FBgn0020887, Su(z)12, [RH, Score=187, Expect=1e-49]} {Smed: dd_Smed_v6_12930_0_1, dd_Smed_v6_12930_0_1, [RH, Score=193, Expect=3e-53]} {RNA1509_42645} {RNA1310_6938, RNA1509_42645} {RNA1509_42645, RNA815_5348} |
| 8. | MligTC455_20907 | 3041 | 63.35 | Mlig455_012486, Mlig455_012578 | Neo: Irradiation Age: logFC(26M/2M)=0.285 Region-enriched R5: 1.149/0.00019 |
BCAT2 | 0.956 | 0.956 | - | - | - | - | - | Mlig455_012486 {REF} {Length: 3875} {TRANSSPLICED} {Pfam: Amino-transferase class IV [PF01063.21, score=99.3]} {Human: ENSG00000105552, BCAT2, branched chain amino acid transaminase 2, [Score=375, Expect=3e-128]; ENSG00000060982, BCAT1, branched chain amino acid transaminase 1, [Score=360, Expect=1e-122]} {Mouse: ENSMUSG00000030826, Bcat2, branched chain aminotransferase 2, mitochondrial, [Score=372, Expect=3e-127]; ENSMUSG00000030268, Bcat1, branched chain aminotransferase 1, cytosolic, [Score=362, Expect=1e-122]} {Dmel: FBgn0030482, CG1673, [Score=368, Expect=3e-125]} {Celegans: WBGene00001149, bcat-1, Branched-chain-amino-acid aminotransferase, cytosolic, [Score=353, Expect=8e-120]} {Smed: dd_Smed_v6_3721_0_1, dd_Smed_v6_3721_0_1, [Score=374, Expect=1e-128]} {RNA1509_13368, RNA1509_15302, RNA1509_9563} {RNA1310_2318.1, RNA1509_13368, RNA1509_15302} {RNA1509_13368, RNA1509_15302, RNA815_3748.1} Mlig455_012578 {REF} {Length: 3855} {TRANSSPLICED} {Pfam: Amino-transferase class IV [PF01063.21, score=100.6]} {Human: ENSG00000105552, BCAT2, branched chain amino acid transaminase 2, [RH, Score=408, Expect=1e-140]; ENSG00000060982, BCAT1, branched chain amino acid transaminase 1, [RH, Score=397, Expect=2e-136]} {Mouse: ENSMUSG00000030826, Bcat2, branched chain aminotransferase 2, mitochondrial, [RH, Score=404, Expect=3e-139]; ENSMUSG00000030268, Bcat1, branched chain aminotransferase 1, cytosolic, [RH, Score=399, Expect=2e-136]} {Dmel: FBgn0030482, CG1673, [RH, Score=414, Expect=2e-142]} {Celegans: WBGene00001149, bcat-1, Branched-chain-amino-acid aminotransferase, cytosolic, [RH, Score=386, Expect=4e-132]} {Smed: dd_Smed_v6_3721_0_1, dd_Smed_v6_3721_0_1, [RH, Score=425, Expect=4e-148]} {RNA1509_19896, RNA1509_22259, RNA1509_31301, RNA1509_43282, RNA1509_9563} {RNA1310_2318.1, RNA1509_19896, RNA1509_22259, RNA1509_31301, RNA1509_43282, RNA1509_9563} {RNA1509_19896, RNA1509_22259, RNA1509_31301, RNA1509_43282, RNA1509_9563, RNA815_3748.1} |
| 9. | MligTC455_23858 | 194 | 4.04 | Mlig455_023061 | Neo: - Age: - |
TADA2B | 0.953 | - | - | - | 0.953 | - | - | Mlig455_023061 {REF} {Length: 3588} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=21.1]} {Human: ENSG00000173011, TADA2B, transcriptional adaptor 2B, [Score=134, Expect=9e-34]} {Mouse: ENSMUSG00000029196, Tada2b, transcriptional adaptor 2B, [Score=133, Expect=2e-33]} {Dmel: FBgn0037555, Ada2b, transcriptional Adaptor 2b, [Score=109, Expect=6e-25]} {Smed: dd_Smed_v6_7427_0_1, dd_Smed_v6_7427_0_1, [Score=128, Expect=5e-32]} {RNA1509_56799} {RNA1310_15578.1, RNA1509_56799} {RNA1509_56799, RNA815_34032} |
| 10. | MligTC455_21080 | 1039 | 21.65 | Mlig455_017961 | Neo: Irradiation Age: - |
PDCD4 | 0.952 | 0.952 | - | - | - | - | - | Mlig455_017961 {REF} {Length: 3699} {TRANSSPLICED} {Pfam: MA3 domain [PF02847.19, score=137.1]} {Human: ENSG00000150593, PDCD4, programmed cell death 4, [RH, Score=293, Expect=8e-94]} {Mouse: ENSMUSG00000024975, Pdcd4, programmed cell death 4, [RH, Score=296, Expect=4e-95]} {Dmel: FBgn0030520, Pdcd4, Programmed cell death 4, [RH, Score=273, Expect=1e-85]} {Smed: dd_Smed_v6_2176_0_1, dd_Smed_v6_2176_0_1, [RH, Score=367, Expect=4e-123]} {RNA1509_2092} {RNA1310_3135.1, RNA1509_2092} {RNA1509_2092, RNA815_3121} |