TomoSeq data search

Data search

Results for MligTC455_21057

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21057	315	6.57	Mlig455_010340	Neo: - Age: -	KDELR3	Mlig455_010340 {REF} {Length: 1833} {TRANSSPLICED} {Pfam: ER lumen protein retaining receptor [PF00810.20, score=49.0]} {Human: ENSG00000100196, KDELR3, KDEL endoplasmic reticulum protein retention receptor 3, [Score=72.4, Expect=2e-14]; ENSG00000136240, KDELR2, KDEL endoplasmic reticulum protein retention receptor 2, [Score=72.0, Expect=2e-14]; ENSG00000105438, KDELR1, KDEL endoplasmic reticulum protein retention receptor 1, [Score=71.6, Expect=2e-14]} {Mouse: ENSMUSG00000010830, Kdelr3, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3, [Score=76.3, Expect=4e-16]; ENSMUSG00000079111, Kdelr2, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2, [Score=73.9, Expect=2e-15]; ENSMUSG00000002778, Kdelr1, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1, [Score=73.2, Expect=4e-15]} {Dmel: FBgn0267330, KdelR, KDEL receptor, [Score=62.4, Expect=2e-11]} {Celegans: WBGene00016195, C28H8.4, Putative ER lumen protein-retaining receptor C28H8.4, [Score=66.2, Expect=8e-13]} {Smed: dd_Smed_v6_1592_0_1, dd_Smed_v6_1592_0_1, [Score=71.6, Expect=6e-15]} {RNA1509_44783} {RNA1310_34163, RNA1509_44783} {RNA1509_44783, RNA815_17180}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_21057

315

6.57

Mlig455_010340

Neo: -

Age: -

KDELR3

Mlig455_010340 {REF} {Length: 1833} {TRANSSPLICED} {Pfam: ER lumen protein retaining receptor [PF00810.20, score=49.0]} {Human: ENSG00000100196, KDELR3, KDEL endoplasmic reticulum protein retention receptor 3, [Score=72.4, Expect=2e-14]; ENSG00000136240, KDELR2, KDEL endoplasmic reticulum protein retention receptor 2, [Score=72.0, Expect=2e-14]; ENSG00000105438, KDELR1, KDEL endoplasmic reticulum protein retention receptor 1, [Score=71.6, Expect=2e-14]} {Mouse: ENSMUSG00000010830, Kdelr3, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3, [Score=76.3, Expect=4e-16]; ENSMUSG00000079111, Kdelr2, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2, [Score=73.9, Expect=2e-15]; ENSMUSG00000002778, Kdelr1, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1, [Score=73.2, Expect=4e-15]} {Dmel: FBgn0267330, KdelR, KDEL receptor, [Score=62.4, Expect=2e-11]} {Celegans: WBGene00016195, C28H8.4, Putative ER lumen protein-retaining receptor C28H8.4, [Score=66.2, Expect=8e-13]} {Smed: dd_Smed_v6_1592_0_1, dd_Smed_v6_1592_0_1, [Score=71.6, Expect=6e-15]} {RNA1509_44783} {RNA1310_34163, RNA1509_44783} {RNA1509_44783, RNA815_17180}

Cumulative graph for MligTC455_21057

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.897	3.056	0.51675	1.00000
RegionR2	0.252	3.056	0.70429	1.00000
RegionR3	0.111	3.056	0.81696	1.00000
RegionR4	-0.398	3.056	0.53719	0.86007
RegionR5	-0.274	3.056	0.53962	0.90266
RegionR6	0.184	3.056	0.71782	1.00000
RegionR7	-0.446	3.056	0.53198	1.00000
RegionR8	-0.326	3.056	0.69451	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.359	3.056	0.30565	0.99978
RegenerationR2	0.752	3.056	0.14885	0.58191
RegenerationR3	0.123	3.056	0.83982	0.99448
RegenerationR4	0.63	3.056	0.32337	0.76119
RegenerationR5	0.984	3.056	0.06436	0.40026
RegenerationR6	-0.36	3.056	0.59603	0.86663
RegenerationBL	1.511	3.056	0.03786	0.22038
RegenerationTP	1.272	3.056	0.10028	0.49273

Genes with expression patterns similar to MligTC455_21057

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21057	315	6.57	Mlig455_010340	Neo: - Age: -	KDELR3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010340 {REF} {Length: 1833} {TRANSSPLICED} {Pfam: ER lumen protein retaining receptor [PF00810.20, score=49.0]} {Human: ENSG00000100196, KDELR3, KDEL endoplasmic reticulum protein retention receptor 3, [Score=72.4, Expect=2e-14]; ENSG00000136240, KDELR2, KDEL endoplasmic reticulum protein retention receptor 2, [Score=72.0, Expect=2e-14]; ENSG00000105438, KDELR1, KDEL endoplasmic reticulum protein retention receptor 1, [Score=71.6, Expect=2e-14]} {Mouse: ENSMUSG00000010830, Kdelr3, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3, [Score=76.3, Expect=4e-16]; ENSMUSG00000079111, Kdelr2, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2, [Score=73.9, Expect=2e-15]; ENSMUSG00000002778, Kdelr1, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1, [Score=73.2, Expect=4e-15]} {Dmel: FBgn0267330, KdelR, KDEL receptor, [Score=62.4, Expect=2e-11]} {Celegans: WBGene00016195, C28H8.4, Putative ER lumen protein-retaining receptor C28H8.4, [Score=66.2, Expect=8e-13]} {Smed: dd_Smed_v6_1592_0_1, dd_Smed_v6_1592_0_1, [Score=71.6, Expect=6e-15]} {RNA1509_44783} {RNA1310_34163, RNA1509_44783} {RNA1509_44783, RNA815_17180}
2.	MligTC455_44630	798	16.62	Mlig455_014616	Neo: - Age: - Regeneration-upregulated BL: 2.163 Regeneration-enriched BL: 2.163	NCOA5	1.736	-	0.765	-	-	-	0.971	Mlig455_014616 {REF} {Length: 2079} {TRANSSPLICED} {Human: ENSG00000124160, NCOA5, nuclear receptor coactivator 5, [Score=49.7, Expect=9e-06]} {Mouse: ENSMUSG00000039804, Ncoa5, nuclear receptor coactivator 5, [Score=50.8, Expect=2e-06]} {RNA1509_14739} {RNA1310_12637.1, RNA1509_14739} {RNA1509_14739, RNA815_4421}
3.	MligTC455_17031	210	4.37	Mlig455_041608	Neo: - Age: -	SMG8	1.724	-	-	-	-	0.973	0.751	Mlig455_041608 {REF} {Length: 3518} {TRANSSPLICED} {Pfam: Smg8_Smg9 [PF10220.11, score=470.8]} {Human: ENSG00000167447, SMG8, SMG8, nonsense mediated mRNA decay factor, [RH, Score=263, Expect=8e-74]} {Mouse: ENSMUSG00000020495, Smg8, smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans), [RH, Score=180, Expect=5e-46]} {Dmel: FBgn0032296, CG6729, [RH, Score=117, Expect=2e-26]} {Celegans: WBGene00010551, smg-8, Suppressor with Morphological effect on Genitalia, [RH, Score=166, Expect=5e-42]} {Smed: dd_Smed_v6_5738_0_2, dd_Smed_v6_5738_0_2, [RH, Score=285, Expect=4e-82]} {RNA1509_27641, RNA1509_41191} {RNA1310_5817.1, RNA1509_27641, RNA1509_41191} {RNA1509_27641, RNA1509_41191, RNA815_3402}
4.	MligTC455_09626	272	5.66	Mlig455_026162	Neo: - Age: -		1.713	-	-	-	-	0.760	0.953	Mlig455_026162 {REF} {Length: 2431} {TRANSSPLICED} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=105.0]} {Celegans: WBGene00019763, galt-1, Beta-1,4-galactosyltransferase galt-1, [RH, Score=103, Expect=8e-24]} {Smed: dd_Smed_v6_12154_0_1, dd_Smed_v6_12154_0_1, [RH, Score=214, Expect=8e-65]} {RNA1509_16641, RNA1509_37951} {RNA1310_21332, RNA1509_37951} {RNA1509_37951, RNA815_8309}
5.	MligTC455_27083	866	18.03	Mlig455_037117	Neo: - Age: Up-Down-Up		0.966	-	-	-	-	0.966	-	Mlig455_037117 {REF} {Length: 3297} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=37.9]} {RNA1509_28043, RNA1509_40834, RNA1509_55948} {RNA1310_8839.1, RNA1509_28043, RNA1509_55948} {RNA1509_28043, RNA1509_55948, RNA815_3523.1}
6.	MligTC455_34652	480	9.99	Mlig455_052267	Neo: - Age: -	PIR	0.956	-	-	-	-	-	0.956	Mlig455_052267 {REF} {Length: 4315} {Pfam: Pirin [PF02678.18, score=83.0]; Pirin C-terminal cupin domain [PF05726.15, score=65.0]} {Human: ENSG00000087842, PIR, pirin, [Score=155, Expect=3e-44]} {Mouse: ENSMUSG00000031379, Pir, pirin, [Score=153, Expect=8e-44]} {RNA1509_21229, RNA1509_33764, RNA1509_39162, RNA1509_39533, RNA1509_46794, RNA1509_56878} {RNA1310_24042, RNA1509_33764, RNA1509_39162, RNA1509_39533, RNA1509_46794, RNA1509_56878} {RNA1509_33764, RNA1509_39162, RNA1509_39533, RNA1509_46794, RNA1509_56878, RNA815_11615}