Data search


search
Exact
Search

Results for MligTC455_44630

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44630 798 16.62 Mlig455_014616

Neo: -

Age: -

Regeneration-upregulated BL: 2.163

Regeneration-enriched BL: 2.163

NCOA5 Mlig455_014616 {REF} {Length: 2079} {TRANSSPLICED} {Human: ENSG00000124160, NCOA5, nuclear receptor coactivator 5, [Score=49.7, Expect=9e-06]} {Mouse: ENSMUSG00000039804, Ncoa5, nuclear receptor coactivator 5, [Score=50.8, Expect=2e-06]} {RNA1509_14739} {RNA1310_12637.1, RNA1509_14739} {RNA1509_14739, RNA815_4421}

Cumulative graph for MligTC455_44630

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.196 4.299 0.84595 1.00000
RegionR2 0.602 4.299 0.17854 0.52811
RegionR3 0.703 4.299 0.05063 0.39369
RegionR4 0.342 4.299 0.38286 0.70746
RegionR5 0.678 4.299 0.03798 0.15346
RegionR6 0.13 4.299 0.73872 1.00000
RegionR7 -0.451 4.299 0.42580 1.00000
RegionR8 -1.807 4.299 0.03567 0.37080

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.206 4.299 0.06739 0.74597
RegenerationR2 0.076 4.299 0.82592 0.99615
RegenerationR3 0.004 4.299 0.99178 1.00000
RegenerationR4 0.395 4.299 0.29861 0.74064
RegenerationR5 0.439 4.299 0.19443 0.62626
RegenerationR6 0.928 4.299 0.01803 0.16575
RegenerationBL 2.163 4.299 0.00000 0.00031 Specific for BL: 2.163
RegenerationTP 1.563 4.299 0.01314 0.19519


Genes with expression patterns similar to MligTC455_44630

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44630 798 16.62 Mlig455_014616

Neo: -

Age: -

Regeneration-upregulated BL: 2.163

Regeneration-enriched BL: 2.163

NCOA5 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_014616 {REF} {Length: 2079} {TRANSSPLICED} {Human: ENSG00000124160, NCOA5, nuclear receptor coactivator 5, [Score=49.7, Expect=9e-06]} {Mouse: ENSMUSG00000039804, Ncoa5, nuclear receptor coactivator 5, [Score=50.8, Expect=2e-06]} {RNA1509_14739} {RNA1310_12637.1, RNA1509_14739} {RNA1509_14739, RNA815_4421}
2. MligTC455_26031 285 5.95 Mlig455_044745

Neo: -

Age: -

ATF7IP2 1.808 - - - 0.836 - 0.972 Mlig455_044745 {REF} {Length: 4919} {Pfam: Fibronectin-III type domain [PF16794.7, score=52.2]} {Human: ENSG00000166669, ATF7IP2, activating transcription factor 7 interacting protein 2, [Score=45.4, Expect=3e-06]} {Mouse: ENSMUSG00000039200, Atf7ip2, activating transcription factor 7 interacting protein 2, [Score=45.4, Expect=2e-06]} {Smed: dd_Smed_v6_9361_0_1, dd_Smed_v6_9361_0_1, [Score=45.1, Expect=1e-06]} {RNA1509_43488, RNA1509_57678} {RNA1310_23373, RNA1509_43488} {RNA1509_43488, RNA815_32542}
3. MligTC455_30629 803 16.73 Mlig455_066612

Neo: -

Age: -

Region-enriched R5: 1.551/0.02318

GALK1 1.784 0.957 - - - - 0.827 Mlig455_066612 {REF} {Length: 1768} {TRANSSPLICED} {Pfam: Galactokinase galactose-binding signature [PF10509.11, score=75.3]; GHMP kinases C terminal [PF08544.15, score=50.8]; GHMP kinases N terminal domain [PF00288.28, score=47.2]} {Human: ENSG00000108479, GALK1, galactokinase 1, [RH, Score=367, Expect=1e-124]} {Mouse: ENSMUSG00000020766, Galk1, galactokinase 1, [RH, Score=365, Expect=4e-124]} {Dmel: FBgn0263199, Galk, Galactokinase, [Score=81.6, Expect=2e-16]} {Celegans: WBGene00006461, tag-96, [Score=101, Expect=3e-23]} {Smed: dd_Smed_v6_5394_0_1, dd_Smed_v6_5394_0_1, [RH, Score=335, Expect=1e-112]} {RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1310_15048, RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1509_16527, RNA1509_24089, RNA1509_48275, RNA815_9890}
4. MligTC455_43815 650 13.55 Mlig455_019908

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.319

CDC73 1.747 - - - 0.796 - 0.951 Mlig455_019908 {REF} {Length: 2638} {Pfam: Paf1 complex subunit CDC73 N-terminal [PF16050.7, score=259.6]; RNA pol II accessory factor, Cdc73 family, C-terminal [PF05179.16, score=159.4]} {Human: ENSG00000134371, CDC73, cell division cycle 73, [RH, Score=299, Expect=7e-93]} {Mouse: ENSMUSG00000026361, Cdc73, cell division cycle 73, Paf1/RNA polymerase II complex component, [RH, Score=299, Expect=5e-93]} {Dmel: FBgn0037657, hyx, hyrax, [RH, Score=278, Expect=2e-85]} {Celegans: WBGene00018064, cdc-73, Cell division cycle protein 73, [RH, Score=145, Expect=5e-37]} {Smed: dd_Smed_v6_3056_0_1, dd_Smed_v6_3056_0_1, [RH, Score=293, Expect=2e-90]} {RNA1509_11097} {RNA1310_6871.1} {RNA815_2766.1}
5. MligTC455_21057 315 6.57 Mlig455_010340

Neo: -

Age: -

KDELR3 1.736 - 0.765 - - - 0.971 Mlig455_010340 {REF} {Length: 1833} {TRANSSPLICED} {Pfam: ER lumen protein retaining receptor [PF00810.20, score=49.0]} {Human: ENSG00000100196, KDELR3, KDEL endoplasmic reticulum protein retention receptor 3, [Score=72.4, Expect=2e-14]; ENSG00000136240, KDELR2, KDEL endoplasmic reticulum protein retention receptor 2, [Score=72.0, Expect=2e-14]; ENSG00000105438, KDELR1, KDEL endoplasmic reticulum protein retention receptor 1, [Score=71.6, Expect=2e-14]} {Mouse: ENSMUSG00000010830, Kdelr3, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3, [Score=76.3, Expect=4e-16]; ENSMUSG00000079111, Kdelr2, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2, [Score=73.9, Expect=2e-15]; ENSMUSG00000002778, Kdelr1, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1, [Score=73.2, Expect=4e-15]} {Dmel: FBgn0267330, KdelR, KDEL receptor, [Score=62.4, Expect=2e-11]} {Celegans: WBGene00016195, C28H8.4, Putative ER lumen protein-retaining receptor C28H8.4, [Score=66.2, Expect=8e-13]} {Smed: dd_Smed_v6_1592_0_1, dd_Smed_v6_1592_0_1, [Score=71.6, Expect=6e-15]} {RNA1509_44783} {RNA1310_34163, RNA1509_44783} {RNA1509_44783, RNA815_17180}
6. MligTC455_19077 965 20.1 Mlig455_056290, Mlig455_056316

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.308/0.04677

JADE1 1.733 - - - 0.779 - 0.954

Mlig455_056290 {REF} {Length: 4617} {Pfam: PHD-zinc-finger like domain [PF13832.8, score=100.9]; PHD-like zinc-binding domain [PF13771.8, score=86.2]; PHD-finger [PF13831.8, score=43.3]; PHD-finger [PF00628.31, score=40.9]; Prokaryotic RING finger family 1 [PF14446.8, score=22.0]} {Human: ENSG00000077684, JADE1, jade family PHD finger 1, [RH, Score=278, Expect=2e-79]; ENSG00000102221, JADE3, jade family PHD finger 3, [RH, Score=277, Expect=7e-79]; ENSG00000043143, JADE2, jade family PHD finger 2, [RH, Score=274, Expect=7e-78]} {Mouse: ENSMUSG00000025764, Jade1, jade family PHD finger 1, [RH, Score=278, Expect=2e-79]; ENSMUSG00000037315, Jade3, jade family PHD finger 3, [RH, Score=274, Expect=4e-78]; ENSMUSG00000020387, Jade2, jade family PHD finger 2, [RH, Score=273, Expect=1e-77]} {Dmel: FBgn0035106, rno, rhinoceros, [RH, Score=296, Expect=8e-83]} {Celegans: WBGene00006975, zfp-1, isoform a, [Score=140, Expect=1e-33]} {Smed: dd_Smed_v6_11492_0_2, dd_Smed_v6_11492_0_2, [RH, Score=249, Expect=3e-70]} {RNA1509_23754, RNA1509_29182, RNA1509_56024} {RNA1310_2765.2, RNA1509_23754, RNA1509_29182, RNA1509_56024} {RNA1509_23754, RNA1509_29182, RNA1509_56024, RNA815_2863}

Mlig455_056316 {REF} {Length: 4168} {TRANSSPLICED} {Pfam: PHD-zinc-finger like domain [PF13832.8, score=100.9]; PHD-like zinc-binding domain [PF13771.8, score=86.2]; PHD-finger [PF13831.8, score=43.3]; PHD-finger [PF00628.31, score=40.9]; Prokaryotic RING finger family 1 [PF14446.8, score=22.0]} {Human: ENSG00000077684, JADE1, jade family PHD finger 1, [RH, Score=280, Expect=8e-80]; ENSG00000102221, JADE3, jade family PHD finger 3, [RH, Score=277, Expect=5e-79]; ENSG00000043143, JADE2, jade family PHD finger 2, [RH, Score=274, Expect=7e-78]} {Mouse: ENSMUSG00000025764, Jade1, jade family PHD finger 1, [RH, Score=280, Expect=5e-80]; ENSMUSG00000037315, Jade3, jade family PHD finger 3, [RH, Score=276, Expect=1e-78]; ENSMUSG00000020387, Jade2, jade family PHD finger 2, [RH, Score=273, Expect=9e-78]} {Dmel: FBgn0035106, rno, rhinoceros, [RH, Score=296, Expect=1e-82]} {Celegans: WBGene00006975, zfp-1, isoform a, [Score=140, Expect=1e-33]} {Smed: dd_Smed_v6_11492_0_2, dd_Smed_v6_11492_0_2, [RH, Score=251, Expect=4e-71]} {RNA1509_56024} {RNA1310_2808} {RNA815_2863}
7. MligTC455_21375 1145 23.84 Mlig455_062890

Neo: -

Age: Up-Up-Down

PRRC2C 1.667 0.953 - - - 0.714 - Mlig455_062890 {REF} {Length: 7333} {TRANSSPLICED} {Pfam: BAT2 N-terminus [PF07001.13, score=82.6]} {Human: ENSG00000117523, PRRC2C, proline rich coiled-coil 2C, [Score=78.6, Expect=1e-13]} {Mouse: ENSMUSG00000040225, Prrc2c, proline-rich coiled-coil 2C, [RH, Score=78.6, Expect=8e-14]} {Smed: dd_Smed_v6_4611_0_1, dd_Smed_v6_4611_0_1, [Score=66.2, Expect=2e-10]} {RNA1509_49975, RNA1509_608} {RNA1310_328.1, RNA1509_49975} {RNA1509_49975, RNA815_384.1}
8. MligTC455_09626 272 5.66 Mlig455_026162

Neo: -

Age: -

0.973 - - - - - 0.973 Mlig455_026162 {REF} {Length: 2431} {TRANSSPLICED} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=105.0]} {Celegans: WBGene00019763, galt-1, Beta-1,4-galactosyltransferase galt-1, [RH, Score=103, Expect=8e-24]} {Smed: dd_Smed_v6_12154_0_1, dd_Smed_v6_12154_0_1, [RH, Score=214, Expect=8e-65]} {RNA1509_16641, RNA1509_37951} {RNA1310_21332, RNA1509_37951} {RNA1509_37951, RNA815_8309}
9. MligTC455_28003 257 5.35 Mlig455_047185

Neo: -

Age: logFC(26M/2M)=0.773

0.969 - - - - - 0.969 Mlig455_047185 {REF} {Length: 2585} {TRANSSPLICED} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=29.4]; Protein of unknown function (DUF1180) [PF06679.14, score=19.6]} {RNA1509_25059, RNA1509_25584} {RNA1310_35177, RNA1509_25059, RNA1509_25584} {RNA1509_25059, RNA1509_25584, RNA815_7915.1}
10. MligTC455_32124 332 6.91 Mlig455_016428

Neo: -

Age: -

0.967 0.967 - - - - - Mlig455_016428 {REF} {Length: 4611} {RNA1509_33226, RNA1509_35332} {RNA1310_5669.1, RNA1509_33226, RNA1509_35332} {RNA1509_33226, RNA1509_35332, RNA815_13512}
11. MligTC455_41991 456 9.5 Mlig455_062277

Neo: -

Age: -

NDST3 0.958 - - - - - 0.958 Mlig455_062277 {REF} {Length: 5128} {Pfam: heparan sulfate-N-deacetylase [PF12062.10, score=456.8]; Sulfotransferase domain [PF00685.29, score=92.8]; Sulfotransferase family [PF13469.8, score=43.9]} {Human: ENSG00000164100, NDST3, N-deacetylase and N-sulfotransferase 3, [RH, Score=682, Expect=0.0]; ENSG00000166507, NDST2, N-deacetylase and N-sulfotransferase 2, [RH, Score=679, Expect=0.0]; ENSG00000070614, NDST1, N-deacetylase and N-sulfotransferase 1, [RH, Score=667, Expect=0.0]; ENSG00000138653, NDST4, N-deacetylase and N-sulfotransferase 4, [RH, Score=661, Expect=0.0]} {Mouse: ENSMUSG00000027977, Ndst3, N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3, [RH, Score=683, Expect=0.0]; ENSMUSG00000039308, Ndst2, N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2, [RH, Score=679, Expect=0.0]; ENSMUSG00000027971, Ndst4, N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4, [RH, Score=669, Expect=0.0]; ENSMUSG00000054008, Ndst1, N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1, [RH, Score=666, Expect=0.0]} {Dmel: FBgn0020251, sfl, sulfateless, [RH, Score=716, Expect=0.0]} {Celegans: WBGene00002028, hst-1, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 Heparan sulfate N-deacetylase 1 Heparan sulfate N-sulfotransferase 1, [RH, Score=605, Expect=0.0]} {Smed: dd_Smed_v6_12192_0_2, dd_Smed_v6_12192_0_2, [RH, Score=541, Expect=8e-179]} {RNA1509_9775} {RNA1310_5396, RNA1509_9775} {RNA1509_9775, RNA815_1944}
12. MligTC455_42009 650 13.54 Mlig455_020735, Mlig455_020807

Neo: -

Age: -

WDR24 0.955 0.955 - - - - -

Mlig455_020735 {REF} {Length: 4356} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=42.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=23.8]; Zinc-ribbon, C4HC2 type [PF17120.7, score=23.4]} {Human: ENSG00000127580, WDR24, WD repeat domain 24, [RH, Score=190, Expect=1e-49]} {Mouse: ENSMUSG00000025737, Wdr24, WD repeat domain 24, [RH, Score=191, Expect=4e-50]} {Dmel: FBgn0027518, Wdr24, WD repeat domain 24, [RH, Score=182, Expect=2e-47]} {Celegans: WBGene00021316, Y32H12A.8, [RH, Score=131, Expect=1e-30]} {Smed: dd_Smed_v6_6280_0_1, dd_Smed_v6_6280_0_1, [RH, Score=144, Expect=4e-35]} {RNA1509_12662} {RNA1310_2373.1, RNA1509_12662} {RNA1509_12662, RNA815_16648}

Mlig455_020807 {REF} {Length: 4433} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=42.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=23.8]; Zinc-ribbon, C4HC2 type [PF17120.7, score=23.4]} {Human: ENSG00000127580, WDR24, WD repeat domain 24, [RH, Score=191, Expect=6e-50]} {Mouse: ENSMUSG00000025737, Wdr24, WD repeat domain 24, [RH, Score=191, Expect=3e-50]} {Dmel: FBgn0027518, Wdr24, WD repeat domain 24, [RH, Score=181, Expect=6e-47]} {Celegans: WBGene00021316, Y32H12A.8, [RH, Score=131, Expect=1e-30]} {Smed: dd_Smed_v6_6280_0_1, dd_Smed_v6_6280_0_1, [RH, Score=145, Expect=2e-35]} {RNA1509_12662, RNA1509_30976, RNA1509_45998, RNA1509_50057} {RNA1310_2373.1, RNA1509_30976, RNA1509_45998, RNA1509_50057} {RNA1509_30976, RNA1509_45998, RNA1509_50057, RNA815_16648}
13. MligTC455_47233 135 2.8 Mlig455_050486

Neo: -

Age: -

0.954 0.954 - - - - - Mlig455_050486 {REF} {Length: 3564} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.8]; Prokaryotic RING finger family 4 [PF14447.8, score=20.8]; Ring finger domain [PF13639.8, score=20.7]} {RNA1509_49389, RNA1509_50445} {RNA1310_32377.1, RNA1509_49389, RNA1509_50445} {RNA1509_49389, RNA1509_50445, RNA815_33010}
14. MligTC455_48564 2874 59.87 Mlig455_000213, Mlig455_058473

Neo: -

Age: Down-Up-Up

0.95 - - - - 0.950 -

Mlig455_000213 {REF} {Length: 623} {TRANSSPLICED} {RNA1509_42464, RNA1509_7822} {RNA1310_56581, RNA1509_42464, RNA1509_7822} {RNA1509_42464, RNA1509_7822, RNA815_52105}

Mlig455_058473 {REF} {Length: 611} {TRANSSPLICED} {RNA1509_7822} {RNA1310_56581} {RNA815_52105}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA