TomoSeq data search

Data search

Results for MligTC455_21076

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21076	336	7.00	Mlig455_051633	Neo: Int S/G2/M Age: - Region-enriched R4: 2.026/0.02685 Region-enriched R5: 1.711/0.03046		Mlig455_051633 {REF} {Length: 1096} {TRANSSPLICED} {Pfam: Elongator subunit Iki1 [PF10483.11, score=28.3]} {RNA1509_31160, RNA1509_45434} {RNA1310_30401, RNA1509_31160, RNA1509_45434} {RNA1509_31160, RNA1509_45434, RNA815_14488}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_21076

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.091	3.327	0.11950	0.71123
RegionR2	0.203	3.327	0.76546	1.00000
RegionR3	-0.148	3.327	0.89535	1.00000
RegionR4	2.026	3.327	0.00339	0.02685
RegionR5	1.711	3.327	0.00422	0.03046
RegionR6	1.238	3.327	0.09679	0.57219
RegionR7	1.498	3.327	0.07522	0.52942
RegionR8	-0.437	3.327	0.94919	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.488	3.327	1.00000	1.00000
RegenerationR2	0.523	3.327	0.18800	0.63119
RegenerationR3	0.698	3.327	0.16970	0.60449
RegenerationR4	-0.333	3.327	0.45503	0.84450
RegenerationR5	-0.279	3.327	0.46785	0.84096
RegenerationR6	0.076	3.327	0.86567	1.00000
RegenerationBL	0.218	3.327	0.72807	1.00000
RegenerationTP	0.161	3.327	0.83473	1.00000

Genes with expression patterns similar to MligTC455_21076

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21076	336	7	Mlig455_051633	Neo: Int S/G2/M Age: - Region-enriched R4: 2.026/0.02685 Region-enriched R5: 1.711/0.03046		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_051633 {REF} {Length: 1096} {TRANSSPLICED} {Pfam: Elongator subunit Iki1 [PF10483.11, score=28.3]} {RNA1509_31160, RNA1509_45434} {RNA1310_30401, RNA1509_31160, RNA1509_45434} {RNA1509_31160, RNA1509_45434, RNA815_14488}
2.	MligTC455_47028	572	11.91	Mlig455_061142	Neo: - Age: -	DHDDS	0.957	-	-	-	-	-	0.957	Mlig455_061142 {REF} {Length: 1426} {TRANSSPLICED} {Pfam: Putative undecaprenyl diphosphate synthase [PF01255.21, score=239.9]} {Human: ENSG00000117682, DHDDS, dehydrodolichyl diphosphate synthase subunit, [RH, Score=282, Expect=2e-93]} {Mouse: ENSMUSG00000012117, Dhdds, dehydrodolichyl diphosphate synthase, [RH, Score=281, Expect=5e-93]} {Dmel: FBgn0029980, CG10778, [RH, Score=250, Expect=2e-81]} {Celegans: WBGene00044025, T01G1.4, Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific), [RH, Score=221, Expect=2e-70]} {Smed: dd_Smed_v6_6603_0_1, dd_Smed_v6_6603_0_1, [RH, Score=273, Expect=1e-90]} {RNA1509_4999} {RNA1310_27885} {RNA815_2608.1}
3.	MligTC455_27406	552	11.5	Mlig455_051298	Neo: - Age: - Region-enriched R7: 1.402/0.04183	RAB43	0.956	-	-	0.956	-	-	-	Mlig455_051298 {REF} {Length: 2460} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=183.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=109.9]; ADP-ribosylation factor family [PF00025.23, score=47.1]} {Human: ENSG00000172780, RAB43, RAB43, member RAS oncogene family, [RH, Score=252, Expect=2e-85]} {Mouse: ENSMUSG00000030055, Rab43, RAB43, member RAS oncogene family, [RH, Score=243, Expect=9e-82]} {Dmel: FBgn0015793, Rab19, [RH, Score=223, Expect=4e-74]} {Celegans: WBGene00004278, rab-19, RAB family, [RH, Score=233, Expect=3e-78]} {Smed: dd_Smed_v6_2494_0_1, dd_Smed_v6_2494_0_1, [RH, Score=277, Expect=7e-96]} {RNA1509_23112, RNA1509_55959, RNA1509_57778} {RNA1310_38246, RNA1509_23112, RNA1509_55959, RNA1509_57778} {RNA1509_23112, RNA1509_55959, RNA1509_57778, RNA815_20787}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_21076

336

Mlig455_051633

Neo: Int S/G2/M

Age: -

Region-enriched R4: 2.026/0.02685
Region-enriched R5: 1.711/0.03046

1.000

MligTC455_47028

572

11.91

Mlig455_061142

Neo: -

Age: -

DHDDS

0.957

Mlig455_061142 {REF} {Length: 1426} {TRANSSPLICED} {Pfam: Putative undecaprenyl diphosphate synthase [PF01255.21, score=239.9]} {Human: ENSG00000117682, DHDDS, dehydrodolichyl diphosphate synthase subunit, [RH, Score=282, Expect=2e-93]} {Mouse: ENSMUSG00000012117, Dhdds, dehydrodolichyl diphosphate synthase, [RH, Score=281, Expect=5e-93]} {Dmel: FBgn0029980, CG10778, [RH, Score=250, Expect=2e-81]} {Celegans: WBGene00044025, T01G1.4, Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific), [RH, Score=221, Expect=2e-70]} {Smed: dd_Smed_v6_6603_0_1, dd_Smed_v6_6603_0_1, [RH, Score=273, Expect=1e-90]} {RNA1509_4999} {RNA1310_27885} {RNA815_2608.1}

MligTC455_27406

552

11.5

Mlig455_051298

Neo: -

Age: -

Region-enriched R7: 1.402/0.04183

RAB43

0.956

Mlig455_051298 {REF} {Length: 2460} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=183.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=109.9]; ADP-ribosylation factor family [PF00025.23, score=47.1]} {Human: ENSG00000172780, RAB43, RAB43, member RAS oncogene family, [RH, Score=252, Expect=2e-85]} {Mouse: ENSMUSG00000030055, Rab43, RAB43, member RAS oncogene family, [RH, Score=243, Expect=9e-82]} {Dmel: FBgn0015793, Rab19, [RH, Score=223, Expect=4e-74]} {Celegans: WBGene00004278, rab-19, RAB family, [RH, Score=233, Expect=3e-78]} {Smed: dd_Smed_v6_2494_0_1, dd_Smed_v6_2494_0_1, [RH, Score=277, Expect=7e-96]} {RNA1509_23112, RNA1509_55959, RNA1509_57778} {RNA1310_38246, RNA1509_23112, RNA1509_55959, RNA1509_57778} {RNA1509_23112, RNA1509_55959, RNA1509_57778, RNA815_20787}