Data search
Results for MligTC455_21080
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21080 | 1039 | 21.65 | Mlig455_017961 | Neo: Irradiation Age: - |
PDCD4 | Mlig455_017961 {REF} {Length: 3699} {TRANSSPLICED} {Pfam: MA3 domain [PF02847.19, score=137.1]} {Human: ENSG00000150593, PDCD4, programmed cell death 4, [RH, Score=293, Expect=8e-94]} {Mouse: ENSMUSG00000024975, Pdcd4, programmed cell death 4, [RH, Score=296, Expect=4e-95]} {Dmel: FBgn0030520, Pdcd4, Programmed cell death 4, [RH, Score=273, Expect=1e-85]} {Smed: dd_Smed_v6_2176_0_1, dd_Smed_v6_2176_0_1, [RH, Score=367, Expect=4e-123]} {RNA1509_2092} {RNA1310_3135.1, RNA1509_2092} {RNA1509_2092, RNA815_3121} |
Cumulative graph for MligTC455_21080
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.661 | 4.575 | 0.65190 | 1.00000 | |
| RegionR2 | -0.902 | 4.575 | 0.17061 | 0.51657 | |
| RegionR3 | -0.252 | 4.575 | 0.63971 | 1.00000 | |
| RegionR4 | 0.969 | 4.575 | 0.11926 | 0.34578 | |
| RegionR5 | 0.813 | 4.575 | 0.09586 | 0.29669 | |
| RegionR6 | -0.098 | 4.575 | 0.85804 | 1.00000 | |
| RegionR7 | 0.752 | 4.575 | 0.19131 | 0.79579 | |
| RegionR8 | -0.621 | 4.575 | 0.45270 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.242 | 4.575 | 0.14767 | 0.88929 | |
| RegenerationR2 | 1.145 | 4.575 | 0.05009 | 0.36930 | |
| RegenerationR3 | 1.284 | 4.575 | 0.04370 | 0.36508 | |
| RegenerationR4 | 0.598 | 4.575 | 0.33902 | 0.77092 | |
| RegenerationR5 | 0.527 | 4.575 | 0.37882 | 0.78638 | |
| RegenerationR6 | 0.414 | 4.575 | 0.51120 | 0.81423 | |
| RegenerationBL | 0.65 | 4.575 | 0.28084 | 0.64204 | |
| RegenerationTP | 0.859 | 4.575 | 0.19663 | 0.63630 |
Genes with expression patterns similar to MligTC455_21080
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21080 | 1039 | 21.65 | Mlig455_017961 | Neo: Irradiation Age: - |
PDCD4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017961 {REF} {Length: 3699} {TRANSSPLICED} {Pfam: MA3 domain [PF02847.19, score=137.1]} {Human: ENSG00000150593, PDCD4, programmed cell death 4, [RH, Score=293, Expect=8e-94]} {Mouse: ENSMUSG00000024975, Pdcd4, programmed cell death 4, [RH, Score=296, Expect=4e-95]} {Dmel: FBgn0030520, Pdcd4, Programmed cell death 4, [RH, Score=273, Expect=1e-85]} {Smed: dd_Smed_v6_2176_0_1, dd_Smed_v6_2176_0_1, [RH, Score=367, Expect=4e-123]} {RNA1509_2092} {RNA1310_3135.1, RNA1509_2092} {RNA1509_2092, RNA815_3121} |
| 2. | MligTC455_20904 | 878 | 18.3 | Mlig455_049876 | Neo: - Age: - Regeneration-downregulated BL: -1.988 Regeneration-depleted BL: -1.988 |
SLC4A8 | 1.718 | - | - | - | 0.768 | - | 0.950 | Mlig455_049876 {REF} {Length: 5552} {TRANSSPLICED} {Pfam: HCO3- transporter family [PF00955.23, score=710.8]; Band 3 cytoplasmic domain [PF07565.15, score=281.6]} {Human: ENSG00000050438, SLC4A8, solute carrier family 4 member 8, [Score=965, Expect=0.0]} {Mouse: ENSMUSG00000023032, Slc4a8, solute carrier family 4 (anion exchanger), member 8, [Score=960, Expect=0.0]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [Score=648, Expect=0.0]} {Celegans: WBGene00009920, abts-1, Anion exchange protein, [Score=601, Expect=0.0]} {Smed: dd_Smed_v6_3003_0_2, dd_Smed_v6_3003_0_2, [RH, Score=1195, Expect=0.0]} {RNA1509_25288, RNA1509_5194} {RNA1310_6943, RNA1509_25288, RNA1509_5194} {RNA1509_25288, RNA1509_5194, RNA815_5130} |
| 3. | MligTC455_43801 | 509 | 10.6 | Mlig455_057114 | Neo: - Age: logFC(26M/2M)=0.230 |
SLC35E1 | 0.957 | 0.957 | - | - | - | - | - | Mlig455_057114 {REF} {Length: 5842} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=297.4]; EamA-like transporter family [PF00892.22, score=57.8]; UAA transporter family [PF08449.13, score=30.3]} {Human: ENSG00000127526, SLC35E1, solute carrier family 35 member E1, [RH, Score=327, Expect=2e-108]} {Mouse: ENSMUSG00000019731, Slc35e1, solute carrier family 35, member E1, [RH, Score=321, Expect=3e-106]} {Dmel: FBgn0031183, CG14621, [RH, Score=301, Expect=3e-99]} {Smed: dd_Smed_v6_5304_0_1, dd_Smed_v6_5304_0_1, [RH, Score=315, Expect=3e-104]} {RNA1509_36491, RNA1509_46707} {RNA1310_20214, RNA1509_36491, RNA1509_46707} {RNA1509_36491, RNA1509_46707, RNA815_9941} |
| 4. | MligTC455_50928 | 1465 | 30.53 | Mlig455_048165 | Neo: - Age: - |
MARCH5 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_048165 {REF} {Length: 2347} {TRANSSPLICED} {Pfam: RING-variant domain [PF12906.9, score=46.7]} {Human: ENSG00000198060, MARCH5, membrane associated ring-CH-type finger 5, [RH, Score=294, Expect=1e-99]} {Mouse: ENSMUSG00000111123, March5, membrane-associated ring finger (C3HC4) 5, [RH, Score=294, Expect=9e-100]; ENSMUSG00000023307, March5, membrane-associated ring finger (C3HC4) 5, [RH, Score=294, Expect=9e-100]} {Dmel: FBgn0037242, CG9855, [RH, Score=267, Expect=9e-88]} {Celegans: WBGene00010913, M110.3, [RH, Score=45.4, Expect=9e-06]} {Smed: dd_Smed_v6_4602_0_1, dd_Smed_v6_4602_0_1, [RH, Score=257, Expect=3e-85]} {RNA1509_13617, RNA1509_16278, RNA1509_19987, RNA1509_25398, RNA1509_26839, RNA1509_35549} {RNA1310_1837.3, RNA1509_13617, RNA1509_16278, RNA1509_19987, RNA1509_25398, RNA1509_26839, RNA1509_35549} {RNA1509_13617, RNA1509_16278, RNA1509_19987, RNA1509_25398, RNA1509_26839, RNA1509_35549, RNA815_13330} |
| 5. | MligTC455_20951 | 660 | 13.75 | Mlig455_008058 | Neo: - Age: - |
TRPC5 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_008058 {REF} {Length: 3242} {Pfam: Transient receptor ion channel II [PF08344.13, score=100.6]; Ion transport protein [PF00520.33, score=93.3]; Polycystin cation channel [PF08016.14, score=32.7]; Ankyrin repeats (3 copies) [PF12796.9, score=29.6]; Ankyrin repeat [PF13606.8, score=22.1]; Ankyrin repeats (many copies) [PF13637.8, score=21.3]} {Human: ENSG00000072315, TRPC5, transient receptor potential cation channel subfamily C member 5, [Score=612, Expect=0.0]; ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=585, Expect=0.0]} {Mouse: ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [Score=612, Expect=0.0]; ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=584, Expect=0.0]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=568, Expect=0.0]} {Celegans: WBGene00006614, trp-1, Transient-receptor-potential-like protein, [Score=712, Expect=0.0]} {Smed: dd_Smed_v6_15627_0_1, dd_Smed_v6_15627_0_1, [Score=528, Expect=3e-171]} {RNA1509_2270} {RNA1310_93280} {RNA815_44973} |
| 6. | MligTC455_20952 | 2067 | 43.07 | Mlig455_007960, Mlig455_008105, Mlig455_015591 | Neo: - |
COL24A1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_007960 {REF} {Length: 5756} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=501.5]; Fibrillar collagen C-terminal domain [PF01410.20, score=117.0]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=390, Expect=1e-112]} {Mouse: ENSMUSG00000045672, Col27a1, collagen, type XXVII, alpha 1, [Score=359, Expect=5e-102]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=369, Expect=1e-105]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=324, Expect=4e-91]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [Score=485, Expect=3e-149]} {RNA1509_2270} {RNA1310_2141} {RNA815_599} Mlig455_008105 {REF} {Length: 4564} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=501.5]; Fibrillar collagen C-terminal domain [PF01410.20, score=118.1]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=412, Expect=2e-120]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=434, Expect=4e-130]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=374, Expect=3e-107]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=327, Expect=4e-92]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [RH, Score=485, Expect=1e-149]} {RNA1509_2270} {RNA1310_2141} {RNA815_599} Mlig455_015591 {REF} {Length: 4713} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=501.2]; Fibrillar collagen C-terminal domain [PF01410.20, score=118.9]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=418, Expect=3e-122]} {Mouse: ENSMUSG00000045672, Col27a1, collagen, type XXVII, alpha 1, [Score=372, Expect=2e-106]; ENSMUSG00000028197, Col24a1, collagen, type XXIV, alpha 1, [Score=354, Expect=1e-100]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=369, Expect=9e-106]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=327, Expect=3e-92]} {Smed: dd_Smed_v6_740_0_1, dd_Smed_v6_740_0_1, [Score=486, Expect=1e-149]} {RNA1509_2270} {RNA1310_2141, RNA1509_2270} {RNA1509_2270, RNA815_599} |
| 7. | MligTC455_23854 | 1346 | 28.04 | Mlig455_047009, Mlig455_047049 | Neo: Neoblast, stringent Age: - Regeneration-upregulated BL: 2.711 Regeneration-enriched BL: 2.711 |
SMARCA1, SMARCA5 | 0.952 | 0.952 | - | - | - | - | - | Mlig455_047009 {REF} {Length: 4747} {Pfam: SNF2-related domain [PF00176.25, score=175.5]; SLIDE [PF09111.12, score=142.3]; HAND [PF09110.13, score=92.2]; Helicase conserved C-terminal domain [PF00271.33, score=78.5]; Myb-like DNA-binding domain [PF00249.33, score=32.0]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.7]} {Human: ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1078, Expect=0.0]; ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1074, Expect=0.0]} {Mouse: ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1088, Expect=0.0]; ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1078, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [Score=1056, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [Score=985, Expect=0.0]} {Smed: dd_Smed_v6_3473_0_1, dd_Smed_v6_3473_0_1, [Score=1015, Expect=0.0]} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1310_4518.1, RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597, RNA815_683.1} Mlig455_047049 {REF} {Length: 3986} {Pfam: SNF2-related domain [PF00176.25, score=279.7]; SLIDE [PF09111.12, score=124.2]; HAND [PF09110.13, score=91.8]; Helicase conserved C-terminal domain [PF00271.33, score=77.7]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; DEAD/DEAH box helicase [PF00270.31, score=28.9]; Myb-like DNA-binding domain [PF00249.33, score=24.3]; DNA-binding domain [PF13892.8, score=22.1]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.1]} {Human: ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1291, Expect=0.0]; ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1268, Expect=0.0]} {Mouse: ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1292, Expect=0.0]; ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1274, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [RH, Score=1256, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [RH, Score=1149, Expect=0.0]} {Smed: dd_Smed_v6_3355_0_1, dd_Smed_v6_3355_0_1, [RH, Score=1175, Expect=0.0]} {RNA1509_2044} {RNA1310_4518.1} {RNA815_683.1} |