M. lignano Tomo-Seq
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Results for MligTC455_21156

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21156 37 0.76 Mlig455_030988

Neo: -

Age: -

 Mlig455_030988 {REF} {Length: 1253} {NoTransDecoderORF} {RNA1509_25737} {RNA1310_54715} {RNA815_38184}

Cumulative graph for MligTC455_21156

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.83 1.23 0.99988 1.00000
RegionR2 0.475 1.23 0.63686 0.97593
RegionR3 -0.075 1.23 0.79877 1.00000
RegionR4 2.485 1.23 0.07940 0.26360
RegionR5 0.24 1.23 0.70495 1.00000
RegionR6 -2.036 1.23 0.99287 1.00000
RegionR7 1.504 1.23 0.41388 1.00000
RegionR8 -1.763 1.23 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.967 1.23 1.00000 1.00000
RegenerationR2 0.197 1.23 0.84877 1.00000
RegenerationR3 0.892 1.23 0.48592 0.85333
RegenerationR4 -1.104 1.23 0.29424 0.73769
RegenerationR5 0.598 1.23 0.57074 0.89621
RegenerationR6 1.732 1.23 0.30259 0.65190
RegenerationBL 0.851 1.23 0.59865 0.94632
RegenerationTP 2.296 1.23 0.31247 0.75689


Genes with expression patterns similar to MligTC455_21156

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21156 37 0.76 Mlig455_030988

Neo: -

Age: -

 3 - 1.000 - - 1.000 1.000 Mlig455_030988 {REF} {Length: 1253} {NoTransDecoderORF} {RNA1509_25737} {RNA1310_54715} {RNA815_38184}
2. MligTC455_27380 52 1.08 Mlig455_002360, Mlig455_043190

Neo: -

Age: -

 0.97 - - - - - 0.970

Mlig455_002360 {REF} {Length: 752} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696}

Mlig455_043190 {REF} {Length: 3497} {TRANSSPLICED} {Pfam: Mediator complex subunit 28 [PF11594.10, score=19.2]} {RNA1509_14239} {RNA1310_5913.1} {RNA815_3696}
3. MligTC455_13711 42 0.87 Mlig455_028682, Mlig455_028702

Neo: -

Age: Up-Down-Down

 0.968 - - - - - 0.968

Mlig455_028682 {REF} {Length: 1963} {Pfam: Phage integrase family [PF00589.24, score=28.9]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1}

Mlig455_028702 {REF} {Length: 2044} {Pfam: Phage integrase family [PF00589.24, score=28.6]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1}
4. MligTC455_37636 52 1.08 Mlig455_056163, Mlig455_058738

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.265

 0.963 - - - - 0.963 -

Mlig455_056163 {REF} {Length: 233} {NoTransDecoderORF} {RNA1310_37769} {RNA815_52459}

Mlig455_058738 {REF} {Length: 2113} {NoTransDecoderORF} {RNA1509_34079} {RNA1310_61747} {RNA815_21592.1}
5. MligTC455_20470 254 5.29 Mlig455_044566

Neo: -

Age: -

 CYP2C8 0.953 - - - - 0.953 - Mlig455_044566 {REF} {Length: 2090} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=301.1]} {Human: ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=230, Expect=5e-69]} {Mouse: ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=229, Expect=8e-69]; ENSMUSG00000032808, Cyp2c38, cytochrome P450, family 2, subfamily c, polypeptide 38, [Score=224, Expect=1e-66]; ENSMUSG00000060613, Cyp2c70, cytochrome P450, family 2, subfamily c, polypeptide 70, [Score=222, Expect=4e-66]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=219, Expect=9e-65]; ENSMUSG00000003053, Cyp2c29, cytochrome P450, family 2, subfamily c, polypeptide 29, [Score=218, Expect=9e-65]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=218, Expect=2e-64]} {Celegans: WBGene00018264, cyp-33C6, CYtochrome P450 family, [Score=204, Expect=2e-59]} {Smed: dd_Smed_v6_4449_0_1, dd_Smed_v6_4449_0_1, [Score=253, Expect=6e-78]} {RNA1509_28090} {RNA1310_13712} {RNA815_6767}

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