Data search
Results for MligTC455_27380
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27380 | 52 | 1.08 | Mlig455_002360, Mlig455_043190 | Neo: - Age: - |
Mlig455_002360 {REF} {Length: 752} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696} Mlig455_043190 {REF} {Length: 3497} {TRANSSPLICED} {Pfam: Mediator complex subunit 28 [PF11594.10, score=19.2]} {RNA1509_14239} {RNA1310_5913.1} {RNA815_3696} |
Cumulative graph for MligTC455_27380
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.743 | 1.493 | 0.99974 | 1.00000 | |
| RegionR2 | -0.42 | 1.493 | 0.86462 | 1.00000 | |
| RegionR3 | 1.377 | 1.493 | 0.25698 | 0.80120 | |
| RegionR4 | 2.53 | 1.493 | 0.10691 | 0.32179 | |
| RegionR5 | 1.215 | 1.493 | 0.32081 | 0.66277 | |
| RegionR6 | 0.594 | 1.493 | 0.58363 | 1.00000 | |
| RegionR7 | 0.372 | 1.493 | 0.70232 | 1.00000 | |
| RegionR8 | -3.926 | 1.493 | 0.99985 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.747 | 1.493 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.755 | 1.493 | 0.42034 | 0.82758 | |
| RegenerationR3 | -1.671 | 1.493 | 0.12028 | 0.53863 | |
| RegenerationR4 | 0.024 | 1.493 | 0.98927 | 1.00000 | |
| RegenerationR5 | -0.022 | 1.493 | 0.98330 | 1.00000 | |
| RegenerationR6 | -1.036 | 1.493 | 0.40781 | 0.74252 | |
| RegenerationBL | 2.519 | 1.493 | 0.14223 | 0.44967 | |
| RegenerationTP | 2.399 | 1.493 | 0.29328 | 0.73835 |
Genes with expression patterns similar to MligTC455_27380
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27380 | 52 | 1.08 | Mlig455_002360, Mlig455_043190 | Neo: - Age: - |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002360 {REF} {Length: 752} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696} Mlig455_043190 {REF} {Length: 3497} {TRANSSPLICED} {Pfam: Mediator complex subunit 28 [PF11594.10, score=19.2]} {RNA1509_14239} {RNA1310_5913.1} {RNA815_3696} |
|
| 2. | MligTC455_46772 | 69 | 1.45 | Mlig455_001764 | Neo: - Age: - |
GVQW3 | 1.696 | - | - | 0.988 | 0.708 | - | - | Mlig455_001764 {REF} {Length: 3678} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=70.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=38.6]; HTH domain in Mos1 transposase [PF17906.3, score=32.2]; Homeodomain-like domain [PF13565.8, score=24.2]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [RH, Score=142, Expect=5e-38]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=94.0, Expect=4e-20]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=107, Expect=1e-24]} {Celegans: WBGene00003623, nhr-25, Nuclear hormone receptor family member nhr-25, [Score=77.8, Expect=7e-15]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=103, Expect=5e-23]} {RNA1509_37146} {RNA1310_13491.1} {RNA815_9073} |
| 3. | MligTC455_38526 | 49 | 1.02 | Mlig455_055981 | Neo: - Age: logFC(26M/2M)=0.636 Region-enriched R5: 3.806/0.01080 |
0.986 | - | - | 0.986 | - | - | - | Mlig455_055981 {REF} {Length: 2090} {RNA1509_28642} {RNA1310_45785} {RNA815_35110} | |
| 4. | MligTC455_22190 | 155 | 3.23 | Mlig455_037448 | Neo: - Age: Down-Up-Down |
0.974 | - | - | 0.974 | - | - | - | Mlig455_037448 {REF} {Length: 1280} {TRANSSPLICED} {RNA1509_26312} {RNA1310_42598} {RNA815_21773} | |
| 5. | MligTC455_26155 | 186 | 3.88 | Mlig455_011976 | Neo: - Age: logFC(26M/2M)=0.338 |
ARPP19 | 0.971 | - | - | 0.971 | - | - | - | Mlig455_011976 {REF} {Length: 2689} {TRANSSPLICED} {Pfam: cAMP-regulated phosphoprotein/endosulfine conserved region [PF04667.19, score=32.4]} {Human: ENSG00000128989, ARPP19, cAMP regulated phosphoprotein 19, [Score=74.3, Expect=2e-17]} {Mouse: ENSMUSG00000007656, Arpp19, cAMP-regulated phosphoprotein 19, [Score=75.9, Expect=3e-18]; ENSMUSG00000038619, Ensa, endosulfine alpha, [Score=72.4, Expect=1e-16]} {Dmel: FBgn0061515, endos, endosulfine, [Score=63.5, Expect=2e-13]} {Smed: dd_Smed_v6_4126_0_2, dd_Smed_v6_4126_0_2, [Score=71.2, Expect=1e-16]} {RNA1509_41546} {RNA1310_25045.1} {RNA815_23953} |
| 6. | MligTC455_21156 | 37 | 0.76 | Mlig455_030988 | Neo: - Age: - |
0.97 | - | - | - | - | - | 0.970 | Mlig455_030988 {REF} {Length: 1253} {NoTransDecoderORF} {RNA1509_25737} {RNA1310_54715} {RNA815_38184} | |
| 7. | MligTC455_39675 | 58 | 1.2 | Mlig455_007821 | Neo: - Age: logFC(26M/2M)=0.406 |
EGFR | 0.967 | - | - | - | - | 0.967 | - | Mlig455_007821 {REF} {Length: 3729} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=257.0]; Protein kinase domain [PF00069.27, score=123.2]; Furin-like cysteine rich region [PF00757.22, score=78.6]; Growth factor receptor domain IV [PF14843.8, score=53.3]; Receptor L domain [PF01030.26, score=30.4]} {Human: ENSG00000146648, EGFR, epidermal growth factor receptor, [RH, Score=367, Expect=3e-109]} {Mouse: ENSMUSG00000020122, Egfr, epidermal growth factor receptor, [Score=387, Expect=7e-117]; ENSMUSG00000062209, Erbb4, erb-b2 receptor tyrosine kinase 4, [Score=385, Expect=1e-115]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [Score=278, Expect=1e-77]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [Score=241, Expect=1e-65]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [Score=317, Expect=5e-91]} {RNA1509_2222} {RNA1310_17934} {RNA815_722} |
| 8. | MligTC455_26583 | 12 | 0.25 | Mlig455_018637, Mlig455_018825, Mlig455_018826 | Neo: - Age: - |
0.965 | - | - | 0.965 | - | - | - | Mlig455_018637 {REF} {Length: 2077} {RNA1509_35604} {RNA1310_38733.1} {RNA815_38454} Mlig455_018825 {REF} {Length: 1387} {RNA1310_38733.1} {RNA815_38454} Mlig455_018826 {REF} {Length: 2190} {RNA1509_29984} {RNA1310_8204} {RNA815_25154} |
|
| 9. | MligTC455_51521 | 84 | 1.75 | Mlig455_031146 | Neo: Irradiation Age: - Regeneration-enriched R3: 4.008 |
TBC1D16 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_031146 {REF} {Length: 1443} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=68.5]} {Human: ENSG00000167291, TBC1D16, TBC1 domain family member 16, [Score=186, Expect=5e-57]} {Mouse: ENSMUSG00000039976, Tbc1d16, TBC1 domain family, member 16, [Score=184, Expect=5e-54]} {Dmel: FBgn0032249, TBC1D16, TBC1 domain family member 16, [Score=201, Expect=7e-61]} {Celegans: WBGene00018639, tbc-16, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=164, Expect=3e-47]} {Smed: dd_Smed_v6_1756_0_1, dd_Smed_v6_1756_0_1, [Score=85.9, Expect=1e-19]} {RNA1509_18315, RNA1509_52772, RNA1509_59088} {RNA1310_14489, RNA1509_18315, RNA1509_52772} {RNA1509_18315, RNA1509_52772, RNA815_9006} |
| 10. | MligTC455_18843 | 15 | 0.3 | Mlig455_068761 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_068761 {REF} {Length: 734} {NoTransDecoderORF} {RNA1310_115139} | |
| 11. | MligTC455_51219 | 114 | 2.37 | Mlig455_064750 | Neo: Irradiation Age: Up-Down-Down |
TUT4 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_064750 {REF} {Length: 5880} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=134.3]; Cid1 family poly A polymerase [PF03828.21, score=54.0]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [Score=367, Expect=3e-105]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [Score=360, Expect=7e-103]} {Dmel: FBgn0260780, wisp, wispy, [Score=109, Expect=9e-24]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=208, Expect=3e-54]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [Score=229, Expect=3e-61]} {RNA1509_52573, RNA1509_7764} {RNA1310_1212.1, RNA1509_52573, RNA1509_7764} {RNA1509_52573, RNA1509_7764, RNA815_8576.1} |
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